Guide to the Human Genome
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Name: ACCN1 Sequence: fasta or formatted (512aa) NCBI GI: 9998944
Description:

amiloride-sensitive cation channel 1, neuronal isoform 2

Referenced in:

Gene Structure
Sodium Channels

Other entries for this name:
alt prot [563aa] amiloride-sensitive cation channel 1, neuronal isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         25           2
 C cysteine            3.1         16           1
 D aspartate           4.5         23           1
 E glutamate           8.8         45           2
 F phenylalanine       5.3         27           2
 G glycine             6.6         34           2
 H histidine           2.9         15           1
 I isoleucine          5.3         27           1
 K lysine              5.7         29           2
 L leucine            11.5         59           3
 M methionine          2.3         12           2
 N asparagine          3.7         19           1
 P proline             4.9         25           3
 Q glutamine           4.1         21           2
 R arginine            2.9         15           2
 S serine              6.2         32           2
 T threonine           6.6         34           2
 V valine              5.9         30           2
 W tryptophan          0.6          3           1
 Y tyrosine            4.1         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 1, neuronal isofor... 
ACCN1                 0.738   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN2                 0.675   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.654   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN3                 0.481   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.481   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.481   amiloride-sensitive cation channel 3 isoform c 
ACCN4                 0.412   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.387   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN5                 0.195   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1B                0.124   sodium channel, nonvoltage-gated 1, beta 
SCNN1A                0.120   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.120   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.120   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1G                0.091   sodium channel, nonvoltage-gated 1, gamma 
SCNN1D                0.084   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.084   sodium channel, nonvoltage-gated 1, delta isoform 1...
CSTF3                 0.007   cleavage stimulation factor subunit 3 isoform 2 [Hom...
FIGF                  0.007   vascular endothelial growth factor D preproprotein [H...
MUC12                 0.005   PREDICTED: mucin 12 
MUC12                 0.005   PREDICTED: mucin 12 
MUC12                 0.005   PREDICTED: mucin 12 
CSTF3                 0.005   cleavage stimulation factor subunit 3 isoform 1 [Homo...
ERG                   0.004   ets-related isoform 4 
ERG                   0.004   ets-related isoform 2 
ERG                   0.004   ets-related isoform 1 
ERG                   0.004   ets-related isoform 3 
MMP26                 0.004   matrix metalloproteinase 26 preproprotein 
CENPC1                0.004   centromere protein C 1 
KIAA0355              0.004   hypothetical protein LOC9710 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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