SCNN1A 15470

Name: SCNN1A	Sequence: fasta or formatted (692aa)		NCBI GI: 227430287
Description: sodium channel, nonvoltage-gated 1 alpha isoform 3		Referenced in: Kidney Sodium Channels
Other entries for this name: alt prot [728aa] sodium channel, nonvoltage-gated 1 alpha isoform 2 alt prot [669aa] sodium channel, nonvoltage-gated 1 alpha isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 32 2 C cysteine 3.0 21 1 D aspartate 3.6 25 2 E glutamate 5.6 39 3 F phenylalanine 5.1 35 2 G glycine 6.8 47 2 H histidine 2.2 15 2 I isoleucine 3.0 21 1 K lysine 3.6 25 1 L leucine 9.4 65 2 M methionine 2.9 20 2 N asparagine 5.8 40 2 P proline 7.7 53 4 Q glutamine 4.5 31 2 R arginine 5.8 40 2 S serine 10.1 70 3 T threonine 4.9 34 2 V valine 5.1 35 2 W tryptophan 1.9 13 1 Y tyrosine 4.5 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, nonvoltage-gated 1 alpha isoform 3 ... SCNN1A 0.996 sodium channel, nonvoltage-gated 1 alpha isoform 2 ... SCNN1A 0.968 sodium channel, nonvoltage-gated 1 alpha isoform 1 [H... SCNN1D 0.299 sodium channel, nonvoltage-gated 1, delta isoform 1... SCNN1D 0.297 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1G 0.249 sodium channel, nonvoltage-gated 1, gamma SCNN1B 0.224 sodium channel, nonvoltage-gated 1, beta ACCN1 0.087 amiloride-sensitive cation channel 1, neuronal isofo... ACCN1 0.086 amiloride-sensitive cation channel 1, neuronal isofor... ACCN3 0.083 amiloride-sensitive cation channel 3 isoform b ACCN3 0.075 amiloride-sensitive cation channel 3 isoform c ACCN3 0.074 amiloride-sensitive cation channel 3 isoform a ACCN2 0.071 amiloride-sensitive cation channel 2, neuronal isofo... ACCN4 0.068 amiloride-sensitive cation channel 4 isoform 1 [Homo... ACCN4 0.064 amiloride-sensitive cation channel 4 isoform 2 [Homo... ACCN2 0.057 amiloride-sensitive cation channel 2, neuronal isofo... ACCN5 0.051 amiloride-sensitive cation channel 5, intestinal [Ho... LOC100292381 0.016 PREDICTED: hypothetical protein IER5L 0.013 immediate early response 5-like TAF4 0.012 TBP-associated factor 4 SYN1 0.011 synapsin I isoform Ia SYN1 0.011 synapsin I isoform Ib RAPH1 0.011 Ras association and pleckstrin homology domains 1 is... C1orf229 0.011 hypothetical protein LOC388759 RAX 0.010 retina and anterior neural fold homeobox LOC100293776 0.009 PREDICTED: hypothetical protein LOC100288658 0.009 PREDICTED: hypothetical protein XP_002342750 LOC100288658 0.009 PREDICTED: hypothetical protein FLJ20021 0.008 PREDICTED: hypothetical protein FLJ20021 0.008 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.