Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACCN2 Sequence: fasta or formatted (574aa) NCBI GI: 21536351
Description:

amiloride-sensitive cation channel 2, neuronal isoform a

Referenced in:

Sodium Channels

Other entries for this name:
alt prot [528aa] amiloride-sensitive cation channel 2, neuronal isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         40           2
 C cysteine            4.5         26           2
 D aspartate           5.4         31           2
 E glutamate           7.7         44           4
 F phenylalanine       5.6         32           2
 G glycine             6.8         39           2
 H histidine           3.3         19           2
 I isoleucine          4.2         24           1
 K lysine              5.9         34           2
 L leucine             9.9         57           2
 M methionine          2.4         14           1
 N asparagine          3.0         17           2
 P proline             5.7         33           3
 Q glutamine           4.0         23           2
 R arginine            4.5         26           2
 S serine              5.4         31           3
 T threonine           4.4         25           1
 V valine              5.4         31           2
 W tryptophan          0.5          3           1
 Y tyrosine            4.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 2, neuronal isofo... 
ACCN2                 0.891   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN1                 0.570   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN1                 0.470   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform c 
ACCN3                 0.392   amiloride-sensitive cation channel 3 isoform b 
ACCN4                 0.376   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.350   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN5                 0.153   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1B                0.082   sodium channel, nonvoltage-gated 1, beta 
SCNN1A                0.069   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.069   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.069   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1G                0.060   sodium channel, nonvoltage-gated 1, gamma 
SCNN1D                0.060   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.060   sodium channel, nonvoltage-gated 1, delta isoform 1...
CPAMD8                0.006   C3 and PZP-like, alpha-2-macroglobulin domain conta...
MYCBP2                0.005   MYC binding protein 2 
LDLRAD2               0.004   low density lipoprotein receptor class A domain con...
C1orf68               0.004   skin-specific protein 32 
AGXT2                 0.004   alanine-glyoxylate aminotransferase 2 precursor [Hom...
VPS13A                0.004   vacuolar protein sorting 13A isoform B 
VPS13A                0.004   vacuolar protein sorting 13A isoform D 
VPS13A                0.004   vacuolar protein sorting 13A isoform A 
VPS13A                0.004   vacuolar protein sorting 13A isoform C 
CFP                   0.004   complement factor properdin precursor 
CFP                   0.004   complement factor properdin precursor 
ZNF304                0.004   zinc finger protein 304 
ADAMTS20              0.004   a disintegrin-like and metalloprotease with thrombo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press