Guide to the Human Genome
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Name: ACCN3 Sequence: fasta or formatted (543aa) NCBI GI: 9998948
Description:

amiloride-sensitive cation channel 3 isoform c

Referenced in:

Sodium Channels

Other entries for this name:
alt prot [531aa] amiloride-sensitive cation channel 3 isoform a
alt prot [549aa] amiloride-sensitive cation channel 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         43           3
 C cysteine            3.5         19           1
 D aspartate           4.8         26           2
 E glutamate           5.5         30           2
 F phenylalanine       4.1         22           2
 G glycine             6.4         35           2
 H histidine           3.1         17           2
 I isoleucine          3.5         19           2
 K lysine              2.0         11           2
 L leucine            11.0         60           2
 M methionine          3.1         17           1
 N asparagine          3.1         17           1
 P proline             9.0         49           3
 Q glutamine           4.1         22           4
 R arginine            7.2         39           2
 S serine              8.5         46           2
 T threonine           4.2         23           3
 V valine              4.6         25           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 3 isoform c 
ACCN3                 0.898   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.894   amiloride-sensitive cation channel 3 isoform a 
ACCN1                 0.447   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN2                 0.438   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.418   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN1                 0.406   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN4                 0.380   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.359   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN5                 0.181   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1A                0.097   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.097   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.097   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1B                0.089   sodium channel, nonvoltage-gated 1, beta 
SCNN1G                0.074   sodium channel, nonvoltage-gated 1, gamma 
SCNN1D                0.070   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.070   sodium channel, nonvoltage-gated 1, delta isoform 1...
DNMBP                 0.010   dynamin binding protein 
ANO8                  0.010   anoctamin 8 
MUC5AC                0.008   mucin 5AC 
MUC5B                 0.008   mucin 5, subtype B, tracheobronchial 
LOC100132614          0.008   PREDICTED: hypothetical protein, partial 
MAMLD1                0.007   mastermind-like domain containing 1 
RC3H2                 0.006   ring finger and CCCH-type zinc finger domains 2 iso...
RC3H2                 0.006   ring finger and CCCH-type zinc finger domains 2 iso...
FAM75A6               0.006   hypothetical protein LOC389730 
RFX1                  0.006   regulatory factor X1 
FAM75A2               0.006   hypothetical protein LOC642265 
FAM75A4               0.006   PREDICTED: family with sequence similarity 75, memb...
FAM75A4               0.006   PREDICTED: family with sequence similarity 75, memb...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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