SCNN1A 15471

Name: SCNN1A	Sequence: fasta or formatted (728aa)		NCBI GI: 227430289
Description: sodium channel, nonvoltage-gated 1 alpha isoform 2		Referenced in: Kidney Sodium Channels
Other entries for this name: alt prot [692aa] sodium channel, nonvoltage-gated 1 alpha isoform 3 alt prot [669aa] sodium channel, nonvoltage-gated 1 alpha isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 33 2 C cysteine 3.0 22 1 D aspartate 3.7 27 2 E glutamate 5.6 41 3 F phenylalanine 4.8 35 2 G glycine 7.4 54 2 H histidine 2.1 15 2 I isoleucine 2.7 20 1 K lysine 3.4 25 1 L leucine 9.5 69 2 M methionine 3.2 23 2 N asparagine 5.5 40 2 P proline 8.1 59 4 Q glutamine 4.5 33 2 R arginine 5.8 42 2 S serine 9.9 72 3 T threonine 5.1 37 2 V valine 5.1 37 2 W tryptophan 1.8 13 1 Y tyrosine 4.3 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, nonvoltage-gated 1 alpha isoform 2 ... SCNN1A 0.945 sodium channel, nonvoltage-gated 1 alpha isoform 3 ... SCNN1A 0.919 sodium channel, nonvoltage-gated 1 alpha isoform 1 [H... SCNN1D 0.283 sodium channel, nonvoltage-gated 1, delta isoform 1... SCNN1D 0.282 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1G 0.236 sodium channel, nonvoltage-gated 1, gamma SCNN1B 0.212 sodium channel, nonvoltage-gated 1, beta ACCN1 0.083 amiloride-sensitive cation channel 1, neuronal isofo... ACCN1 0.082 amiloride-sensitive cation channel 1, neuronal isofor... ACCN3 0.079 amiloride-sensitive cation channel 3 isoform b ACCN3 0.071 amiloride-sensitive cation channel 3 isoform c ACCN3 0.070 amiloride-sensitive cation channel 3 isoform a ACCN2 0.067 amiloride-sensitive cation channel 2, neuronal isofo... ACCN4 0.065 amiloride-sensitive cation channel 4 isoform 1 [Homo... ACCN4 0.061 amiloride-sensitive cation channel 4 isoform 2 [Homo... ACCN2 0.054 amiloride-sensitive cation channel 2, neuronal isofo... ACCN5 0.049 amiloride-sensitive cation channel 5, intestinal [Ho... LOC100292381 0.015 PREDICTED: hypothetical protein IER5L 0.013 immediate early response 5-like TAF4 0.011 TBP-associated factor 4 SYN1 0.011 synapsin I isoform Ia SYN1 0.011 synapsin I isoform Ib RAPH1 0.011 Ras association and pleckstrin homology domains 1 is... C1orf229 0.010 hypothetical protein LOC388759 RAX 0.009 retina and anterior neural fold homeobox LOC100293776 0.009 PREDICTED: hypothetical protein LOC100288658 0.009 PREDICTED: hypothetical protein XP_002342750 LOC100288658 0.009 PREDICTED: hypothetical protein TNS3 0.009 tensin 3 KLHDC7B 0.009 kelch domain containing 7B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.