Guide to the Human Genome
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Name: ACCN3 Sequence: fasta or formatted (549aa) NCBI GI: 9998946
Description:

amiloride-sensitive cation channel 3 isoform b

Referenced in:

Sodium Channels

Other entries for this name:
alt prot [531aa] amiloride-sensitive cation channel 3 isoform a
alt prot [543aa] amiloride-sensitive cation channel 3 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         45           3
 C cysteine            3.5         19           1
 D aspartate           4.2         23           2
 E glutamate           5.6         31           2
 F phenylalanine       3.8         21           2
 G glycine             7.1         39           2
 H histidine           2.7         15           2
 I isoleucine          3.1         17           2
 K lysine              1.8         10           2
 L leucine            11.1         61           2
 M methionine          2.9         16           1
 N asparagine          3.1         17           1
 P proline             9.8         54           3
 Q glutamine           4.0         22           4
 R arginine            7.1         39           2
 S serine              8.2         45           2
 T threonine           4.6         25           3
 V valine              4.9         27           2
 W tryptophan          0.9          5           1
 Y tyrosine            3.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.920   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.888   amiloride-sensitive cation channel 3 isoform c 
ACCN1                 0.442   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN2                 0.433   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN2                 0.413   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN1                 0.401   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN4                 0.379   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.357   amiloride-sensitive cation channel 4 isoform 2 [Homo...
ACCN5                 0.179   amiloride-sensitive cation channel 5, intestinal [Ho...
SCNN1A                0.106   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.106   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.106   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1B                0.088   sodium channel, nonvoltage-gated 1, beta 
SCNN1G                0.074   sodium channel, nonvoltage-gated 1, gamma 
SCNN1D                0.069   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.069   sodium channel, nonvoltage-gated 1, delta isoform 1...
DNMBP                 0.010   dynamin binding protein 
ANO8                  0.010   anoctamin 8 
FMN1                  0.008   formin 1 
MUC5AC                0.008   mucin 5AC 
EIF4G1                0.008   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.008   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.008   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.008   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.008   eukaryotic translation initiation factor 4 gamma, 1 ...
MUC5B                 0.008   mucin 5, subtype B, tracheobronchial 
TAF4                  0.007   TBP-associated factor 4 
MAMLD1                0.007   mastermind-like domain containing 1 
RAPH1                 0.007   Ras association and pleckstrin homology domains 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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