SCNN1A 29410

Name: SCNN1A	Sequence: fasta or formatted (669aa)		NCBI GI: 4506815
Description: sodium channel, nonvoltage-gated 1 alpha isoform 1		Referenced in: Kidney Sodium Channels
Other entries for this name: alt prot [692aa] sodium channel, nonvoltage-gated 1 alpha isoform 3 alt prot [728aa] sodium channel, nonvoltage-gated 1 alpha isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 32 2 C cysteine 3.1 21 1 D aspartate 3.6 24 2 E glutamate 5.5 37 3 F phenylalanine 5.2 35 2 G glycine 6.7 45 2 H histidine 2.2 15 2 I isoleucine 2.8 19 1 K lysine 3.4 23 1 L leucine 9.3 62 2 M methionine 2.8 19 2 N asparagine 5.8 39 2 P proline 7.3 49 4 Q glutamine 4.3 29 2 R arginine 5.8 39 2 S serine 10.2 68 3 T threonine 5.1 34 2 V valine 5.2 35 2 W tryptophan 1.9 13 1 Y tyrosine 4.6 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, nonvoltage-gated 1 alpha isoform 1 [H... SCNN1A 1.000 sodium channel, nonvoltage-gated 1 alpha isoform 2 ... SCNN1A 1.000 sodium channel, nonvoltage-gated 1 alpha isoform 3 ... SCNN1D 0.307 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1D 0.307 sodium channel, nonvoltage-gated 1, delta isoform 1... SCNN1G 0.257 sodium channel, nonvoltage-gated 1, gamma SCNN1B 0.231 sodium channel, nonvoltage-gated 1, beta ACCN1 0.090 amiloride-sensitive cation channel 1, neuronal isofo... ACCN1 0.089 amiloride-sensitive cation channel 1, neuronal isofor... ACCN3 0.085 amiloride-sensitive cation channel 3 isoform b ACCN3 0.077 amiloride-sensitive cation channel 3 isoform c ACCN3 0.076 amiloride-sensitive cation channel 3 isoform a ACCN2 0.073 amiloride-sensitive cation channel 2, neuronal isofo... ACCN4 0.070 amiloride-sensitive cation channel 4 isoform 1 [Homo... ACCN4 0.067 amiloride-sensitive cation channel 4 isoform 2 [Homo... ACCN2 0.059 amiloride-sensitive cation channel 2, neuronal isofo... ACCN5 0.053 amiloride-sensitive cation channel 5, intestinal [Ho... LOC100292381 0.017 PREDICTED: hypothetical protein IER5L 0.014 immediate early response 5-like TAF4 0.012 TBP-associated factor 4 SYN1 0.012 synapsin I isoform Ia SYN1 0.012 synapsin I isoform Ib RAPH1 0.012 Ras association and pleckstrin homology domains 1 is... C1orf229 0.011 hypothetical protein LOC388759 RAX 0.010 retina and anterior neural fold homeobox LOC100293776 0.009 PREDICTED: hypothetical protein LOC100288658 0.009 PREDICTED: hypothetical protein XP_002342750 LOC100288658 0.009 PREDICTED: hypothetical protein FLJ20021 0.009 PREDICTED: hypothetical protein FLJ20021 0.009 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.