Guide to the Human Genome
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Name: ZNF384 Sequence: fasta or formatted (461aa) NCBI GI: 90193619
Description:

nuclear matrix transcription factor 4 isoform c

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [577aa] nuclear matrix transcription factor 4 isoform d
alt prot [516aa] nuclear matrix transcription factor 4 isoform a
alt prot [516aa] nuclear matrix transcription factor 4 isoform a
alt prot [516aa] nuclear matrix transcription factor 4 isoform a
alt prot [500aa] nuclear matrix transcription factor 4 isoform b
alt prot [500aa] nuclear matrix transcription factor 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         41           7
 C cysteine            3.3         15           1
 D aspartate           3.7         17           4
 E glutamate           3.9         18           2
 F phenylalanine       2.4         11           1
 G glycine             5.6         26           9
 H histidine           5.9         27           2
 I isoleucine          2.6         12           1
 K lysine              6.5         30           3
 L leucine             5.9         27           2
 M methionine          2.4         11           1
 N asparagine          3.0         14           1
 P proline             8.0         37           3
 Q glutamine          11.1         51          16
 R arginine            3.0         14           2
 S serine              9.5         44           2
 T threonine           7.2         33           2
 V valine              4.1         19           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear matrix transcription factor 4 isoform c [Hom... 
ZNF384                0.980   nuclear matrix transcription factor 4 isoform b [Hom...
ZNF384                0.980   nuclear matrix transcription factor 4 isoform b [Hom...
ZNF384                0.959   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.959   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.959   nuclear matrix transcription factor 4 isoform a [Hom...
ZNF384                0.895   nuclear matrix transcription factor 4 isoform d [Ho...
ZNF362                0.371   zinc finger protein 362 
ZNF583                0.151   zinc finger protein 583 
ZNF583                0.151   zinc finger protein 583 
ZNF583                0.151   zinc finger protein 583 
ZNF83                 0.150   zinc finger protein 83 isoform b 
ZNF83                 0.150   zinc finger protein 83 isoform b 
ZNF468                0.149   zinc finger protein ZNF468 isoform 1 
ZNF468                0.149   zinc finger protein ZNF468 isoform 2 
ZNF226                0.149   zinc finger protein 226 isoform a 
ZNF226                0.149   zinc finger protein 226 isoform a 
ZNF83                 0.149   zinc finger protein 83 isoform a 
ZNF83                 0.149   zinc finger protein 83 isoform a 
ZNF83                 0.149   zinc finger protein 83 isoform a 
ZNF83                 0.149   zinc finger protein 83 isoform a 
ZNF83                 0.149   zinc finger protein 83 isoform a 
ZNF674                0.148   zinc finger family member 674 isoform 2 
ZNF674                0.148   zinc finger family member 674 isoform 1 
ZFP112                0.148   zinc finger protein 228 isoform 1 
ZFP112                0.148   zinc finger protein 228 isoform 2 
ZNF28                 0.148   zinc finger protein 28 
ZNF611                0.148   zinc finger protein 611 isoform b 
ZNF611                0.148   zinc finger protein 611 isoform a 
ZNF611                0.148   zinc finger protein 611 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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