Guide to the Human Genome
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Name: ACCN5 Sequence: fasta or formatted (505aa) NCBI GI: 31442761
Description:

amiloride-sensitive cation channel 5, intestinal

Referenced in:

Stomach, Small Intestine, and Colon
Sodium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         21           2
 C cysteine            3.6         18           1
 D aspartate           2.8         14           1
 E glutamate           6.1         31           2
 F phenylalanine       6.9         35           2
 G glycine             5.3         27           2
 H histidine           3.0         15           1
 I isoleucine          7.1         36           2
 K lysine              7.3         37           2
 L leucine             9.5         48           2
 M methionine          0.8          4           1
 N asparagine          5.5         28           2
 P proline             4.4         22           3
 Q glutamine           4.8         24           3
 R arginine            3.0         15           2
 S serine              8.1         41           2
 T threonine           5.7         29           3
 V valine              6.9         35           3
 W tryptophan          1.4          7           1
 Y tyrosine            3.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amiloride-sensitive cation channel 5, intestinal [Ho... 
ACCN2                 0.199   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN3                 0.196   amiloride-sensitive cation channel 3 isoform a 
ACCN3                 0.196   amiloride-sensitive cation channel 3 isoform b 
ACCN3                 0.196   amiloride-sensitive cation channel 3 isoform c 
ACCN1                 0.196   amiloride-sensitive cation channel 1, neuronal isofor...
ACCN2                 0.178   amiloride-sensitive cation channel 2, neuronal isofo...
ACCN1                 0.175   amiloride-sensitive cation channel 1, neuronal isofo...
ACCN4                 0.164   amiloride-sensitive cation channel 4 isoform 1 [Homo...
ACCN4                 0.149   amiloride-sensitive cation channel 4 isoform 2 [Homo...
SCNN1B                0.103   sodium channel, nonvoltage-gated 1, beta 
SCNN1G                0.075   sodium channel, nonvoltage-gated 1, gamma 
SCNN1A                0.072   sodium channel, nonvoltage-gated 1 alpha isoform 2 ...
SCNN1A                0.072   sodium channel, nonvoltage-gated 1 alpha isoform 3 ...
SCNN1A                0.072   sodium channel, nonvoltage-gated 1 alpha isoform 1 [H...
SCNN1D                0.067   sodium channel, nonvoltage-gated 1, delta isoform 2 ...
SCNN1D                0.067   sodium channel, nonvoltage-gated 1, delta isoform 1...
PTH2R                 0.007   parathyroid hormone 2 receptor precursor 
XKRX                  0.006   XK, Kell blood group complex subunit-related, X-lin...
CH25H                 0.005   cholesterol 25-hydroxylase 
LOC100133042          0.005   PREDICTED: hypothetical protein 
LOC100133042          0.005   PREDICTED: hypothetical protein 
LOC100133042          0.005   PREDICTED: hypothetical protein 
GTF3C1                0.005   general transcription factor IIIC, polypeptide 1, a...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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