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Search of human proteins with 33188435
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens]
(498 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens] 993 0.0
gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens] 898 0.0
gi|222352151 poly(rC) binding protein 1 [Homo sapiens] 37 0.032
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 37 0.042
gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens] 35 0.12
gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens] 35 0.12
gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens] 35 0.12
gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens] 35 0.12
gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens] 35 0.12
gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens] 35 0.12
gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens] 35 0.12
gi|217330641 IWS1 homolog [Homo sapiens] 35 0.12
gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens] 35 0.21
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 35 0.21
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 35 0.21
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 35 0.21
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 35 0.21
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 35 0.21
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 35 0.21
gi|122937492 SET domain containing 5 [Homo sapiens] 35 0.21
gi|151301154 mucin 6, gastric [Homo sapiens] 34 0.27
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 34 0.35
gi|93141031 paralemmin isoform 1 [Homo sapiens] 34 0.35
gi|66529203 hypothetical protein LOC57714 [Homo sapiens] 34 0.35
gi|33188443 microfilament and actin filament cross-linker protei... 33 0.46
gi|33188445 microfilament and actin filament cross-linker protei... 33 0.46
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 33 0.60
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo... 33 0.60
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 33 0.78
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 33 0.78
>gi|33188435 deleted in liver cancer 1 isoform 3 [Homo sapiens]
Length = 498
Score = 993 bits (2568), Expect = 0.0
Identities = 498/498 (100%), Positives = 498/498 (100%)
Query: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS
Sbjct: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
Query: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC
Sbjct: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
Query: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE
Sbjct: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
Query: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP
Sbjct: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
Query: 241 PKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
PKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS
Sbjct: 241 PKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
Query: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM
Sbjct: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
Query: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST
Sbjct: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
Query: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNSEVAIGLSP 480
DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNSEVAIGLSP
Sbjct: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNSEVAIGLSP 480
Query: 481 YTFPQKRLFHVAGEENIT 498
YTFPQKRLFHVAGEENIT
Sbjct: 481 YTFPQKRLFHVAGEENIT 498
>gi|33188433 deleted in liver cancer 1 isoform 1 [Homo sapiens]
Length = 1528
Score = 898 bits (2321), Expect = 0.0
Identities = 448/453 (98%), Positives = 452/453 (99%)
Query: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS
Sbjct: 1 MSVAIRKRSWEEHVTHWMGQPFNSDDRNTACHHGLVADSLQASMEKDATLNVDRKEKCVS 60
Query: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC
Sbjct: 61 LPDCCHGSELRDFPGRPMGHLSKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLC 120
Query: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE
Sbjct: 121 LTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGE 180
Query: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP
Sbjct: 181 RKVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDP 240
Query: 241 PKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
PKDENERSTCNVVQ+EFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS
Sbjct: 241 PKDENERSTCNVVQDEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFS 300
Query: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM
Sbjct: 301 QHQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIM 360
Query: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST
Sbjct: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
Query: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKS 453
DLPSSTPVANSGTKPKTTAIQGISEKEKA +++
Sbjct: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAEIEA 453
>gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
Length = 356
Score = 37.4 bits (85), Expect = 0.032
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKS 463
LP+ST + I G+ + VK + L + E S
Sbjct: 134 AGDMLPNST--------ERAITIAGVPQSVTECVKQICLVMLETLS 171
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 37.0 bits (84), Expect = 0.042
Identities = 53/223 (23%), Positives = 80/223 (35%), Gaps = 34/223 (15%)
Query: 220 APEKQLLNSAVIAQQRRKPDPP-KDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCL 278
+P + N A + P P EN T N F P NR + S
Sbjct: 618 SPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEPTENRERTANEKTTSS-- 675
Query: 279 LQPPSCPNGMSAENGLEKSGFSQHQNKSPPKVKAEDGMQCLQLKE--TLATQEPTDNQVR 336
P+ P ENG +++ F+ + S E G + E TL+ EPT+N+ R
Sbjct: 676 ---PAEPT----ENG-QRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAEPTENRER 727
Query: 337 LRKRK------EIREDRDRARLDSMVLLIMKLDQLDQDIENALSTSSSPSGTPTNLRRHV 390
K E E+R+R ++ + + + TP +
Sbjct: 728 TANEKTTPFPAEPTENRERTANENTT-------------PSPAQPTENGDRTPLANEKTT 774
Query: 391 PDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGT 433
P L +E+G T N+ SS E T+ TP+AN T
Sbjct: 775 PSLAEPTENGKRTPFANEKTT--SSSAEPTEHAERTPLANENT 815
Score = 32.3 bits (72), Expect = 1.0
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 295 EKSGFSQHQNKSP-PKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEI------REDR 347
E G + ++N +P P E+ + TL+ EP +N+ R E+R
Sbjct: 287 EHGGRTANENNTPSPAEPTENRERTANENTTLSPAEPIENRERTANENTAPFPAGPTENR 346
Query: 348 DRARLDSMVLLIMKLDQLDQDIENALSTSS----SPSGTPTNLRRHVPDLESGSESGADT 403
+ ++ L + + + N +T S + G T P +E G T
Sbjct: 347 EMTANENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERT 406
Query: 404 ISVNQTRVNLSSDTESTDLPSSTPVANSGTKP 435
N SS EST+ TP+AN T P
Sbjct: 407 PFANDKTT--SSSAESTEHGERTPLANENTTP 436
Score = 30.0 bits (66), Expect = 5.1
Identities = 59/268 (22%), Positives = 86/268 (32%), Gaps = 60/268 (22%)
Query: 177 ESGER------KVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAV 230
E GER K T S ++S E L+ P +P + N
Sbjct: 401 EHGERTPFANDKTTSSSAESTEHGERTPLANENTTP-------------SPAEPTENRER 447
Query: 231 IAQQRRKPDPP-KDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMS 289
A + P P EN +T N P NR +T P+ P
Sbjct: 448 TANENTTPSPAGPTENRETTANEKTTLSPVEPTENR-----ETTANEKTTPSPAEPT--- 499
Query: 290 AENGLEKSGFSQHQNKSPPKVKAEDGMQCLQLKE--TLATQEPTDNQVRLRKRKEIREDR 347
ENG +++ F+ + S E G + E T + EPT+N+ R K
Sbjct: 500 -ENG-QRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPA 557
Query: 348 DRARLDSMVLLIMKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVN 407
+ + + TP + P L +E+G T N
Sbjct: 558 E--------------------------PTENGDRTPLANEKTTPSLAEPTENGQRTPFAN 591
Query: 408 QTRVNLSSDTESTDLPSSTPVANSGTKP 435
+ SS E T+ TP+AN T P
Sbjct: 592 EKTT--SSSAEPTEHEERTPLANENTTP 617
>gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens]
Length = 318
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens]
Length = 335
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens]
Length = 361
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens]
Length = 365
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens]
Length = 362
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens]
Length = 331
Score = 35.4 bits (80), Expect = 0.12
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 360 MKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTES 419
M +D+L++DI ++++ S++ S P LR VP + GS G + + R + + +
Sbjct: 74 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Query: 420 TD--LPSST 426
LP+ST
Sbjct: 134 AGDMLPNST 142
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 35.4 bits (80), Expect = 0.12
Identities = 89/407 (21%), Positives = 149/407 (36%), Gaps = 47/407 (11%)
Query: 86 DENDSHEGEDQFLSLEASTETLV-----------HVSDEDNNADLCLT-DDKQVLNTQGQ 133
D N+ H G D S+E +E HV+D +N+ L L D + Q
Sbjct: 32 DVNEQHSGSDTG-SVERHSENETSDREDGLPKGHHVTDSENDEPLNLNASDSESEELHRQ 90
Query: 134 KTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGERKVTDSISKSLEL 193
K S + A P S N G E+E RK+ S S++ EL
Sbjct: 91 KDSDSESEERAEP-----PASDSENEDVNQHGSDSESEET-------RKLPGSDSENEEL 138
Query: 194 CN-EISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDPPKDENERSTCNV 252
N S SE +D K A D+ ++++ + A + + D +E R +
Sbjct: 139 LNGHASDSENEDVGKHPASDS-EIEELQKSPASDSETEDALKPQISDSESEEPPRHQASD 197
Query: 253 VQNEFLDTP--CTNRGLPLLKTDFGSCLLQPPSCPNGMSAENG-LEKSGFSQHQNKSPPK 309
+NE P + L K + P +EN L K S +++ PP+
Sbjct: 198 SENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPR 257
Query: 310 VKAEDGMQCLQLKETLA---TQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIMKLDQLD 366
+A D K ++ +++P NQ + +E+ + R DS K D
Sbjct: 258 HQASDSENEELPKPRISDSESEDPPRNQASDSENEELPKPRVS---DSESEGPQKGPASD 314
Query: 367 QDIENALSTSSSPSGTPTNLRRHV-PDLESGSESGADTISVNQTRVNLSSDTE------- 418
+ E+A P + R + D E ++S +++ + + SSD+E
Sbjct: 315 SETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFH-SSDSEEEEHKKQ 373
Query: 419 --STDLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKS 463
+D K K + ++EKA+ K ++ D D S
Sbjct: 374 KMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDS 420
>gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens]
Length = 350
Score = 34.7 bits (78), Expect = 0.21
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 371 NALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVAN 430
N ST ++P TPT SG+ A + S +T +L S T ST P TP A
Sbjct: 68 NTGSTHTAPPVTPTT---------SGTSQAASSFSTAKTSTSLHSHTSSTHHPEVTPTAT 118
Query: 431 SGTKPKTTAI 440
+ T+I
Sbjct: 119 TKITTNPTSI 128
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 34.7 bits (78), Expect = 0.21
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 13/152 (8%)
Query: 295 EKSGFSQHQNKSP-PKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEI------REDR 347
E G + ++N +P P E+ + TL+ EPT+N+ R E+R
Sbjct: 349 EHGGRTANENNTPSPAEPTENRERTANENTTLSPAEPTENRERTANENTAPFPAGPTENR 408
Query: 348 DRARLDSMVLLIMKLDQLDQDIENALSTSS----SPSGTPTNLRRHVPDLESGSESGADT 403
+ ++ L + + + N +T S + G T P +E G T
Sbjct: 409 EMTANENTTLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERT 468
Query: 404 ISVNQTRVNLSSDTESTDLPSSTPVANSGTKP 435
N SS EST+ TP+AN T P
Sbjct: 469 PFANDKTT--SSSAESTEHGERTPLANENTTP 498
Score = 34.3 bits (77), Expect = 0.27
Identities = 52/223 (23%), Positives = 79/223 (35%), Gaps = 34/223 (15%)
Query: 220 APEKQLLNSAVIAQQRRKPDPP-KDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCL 278
+P + N A + P P EN T N F P NR + S
Sbjct: 680 SPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEPTENRERTANEKTTSS-- 737
Query: 279 LQPPSCPNGMSAENGLEKSGFSQHQNKSPPKVKAEDGMQCLQLKE--TLATQEPTDNQVR 336
P+ P ENG +++ F+ + S E G + E TL+ PT+N+ R
Sbjct: 738 ---PAEPT----ENG-QRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAGPTENRER 789
Query: 337 LRKRK------EIREDRDRARLDSMVLLIMKLDQLDQDIENALSTSSSPSGTPTNLRRHV 390
K E E+R+R ++ + + + TP +
Sbjct: 790 TANEKTTPFPAEPTENRERTANENTT-------------PSPAQPTENGDRTPLANEKTT 836
Query: 391 PDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGT 433
P L +E+G T N+ SS E T+ TP+AN T
Sbjct: 837 PSLAEPTENGKRTPFANEKTT--SSSAEPTEHAERTPLANENT 877
Score = 30.0 bits (66), Expect = 5.1
Identities = 59/268 (22%), Positives = 86/268 (32%), Gaps = 60/268 (22%)
Query: 177 ESGER------KVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAV 230
E GER K T S ++S E L+ P +P + N
Sbjct: 463 EHGERTPFANDKTTSSSAESTEHGERTPLANENTTP-------------SPAEPTENRER 509
Query: 231 IAQQRRKPDPP-KDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMS 289
A + P P EN +T N P NR +T P+ P
Sbjct: 510 TANENTTPSPAGPTENRETTANEKTTLSPVEPTENR-----ETTANEKTTPSPAEPT--- 561
Query: 290 AENGLEKSGFSQHQNKSPPKVKAEDGMQCLQLKE--TLATQEPTDNQVRLRKRKEIREDR 347
ENG +++ F+ + S E G + E T + EPT+N+ R K
Sbjct: 562 -ENG-QRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPA 619
Query: 348 DRARLDSMVLLIMKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVN 407
+ + + TP + P L +E+G T N
Sbjct: 620 E--------------------------PTENGDRTPLANEKTTPSLAEPTENGQRTPFAN 653
Query: 408 QTRVNLSSDTESTDLPSSTPVANSGTKP 435
+ SS E T+ TP+AN T P
Sbjct: 654 EKTT--SSSAEPTEHEERTPLANENTTP 679
>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
sapiens]
Length = 1276
Score = 34.7 bits (78), Expect = 0.21
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 365 LDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPS 424
L+ ++ S SSS S TP++ P + GS+ G+ S +TRV +S +E + +
Sbjct: 634 LESPLQRTSSGSSSSSSTPSSQ----PSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLP 689
Query: 425 STPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDED 461
P K K + I+ + A S K +DED
Sbjct: 690 HEP-----AKVKPEESRDITRPSRPA--SYKKAIDED 719
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 34.7 bits (78), Expect = 0.21
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 365 LDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPS 424
L+ ++ S SSS S TP++ P + GS+ G+ S +TRV +S +E + +
Sbjct: 663 LESPLQRTSSGSSSSSSTPSSQ----PSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLP 718
Query: 425 STPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDED 461
P K K + I+ + A S K +DED
Sbjct: 719 HEP-----AKVKPEESRDITRPSRPA--SYKKAIDED 748
>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
sapiens]
Length = 1331
Score = 34.7 bits (78), Expect = 0.21
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 365 LDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPS 424
L+ ++ S SSS S TP++ P + GS+ G+ S +TRV +S +E + +
Sbjct: 689 LESPLQRTSSGSSSSSSTPSSQ----PSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLP 744
Query: 425 STPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDED 461
P K K + I+ + A S K +DED
Sbjct: 745 HEP-----AKVKPEESRDITRPSRPA--SYKKAIDED 774
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 34.7 bits (78), Expect = 0.21
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 365 LDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPS 424
L+ ++ S SSS S TP++ P + GS+ G+ S +TRV +S +E + +
Sbjct: 718 LESPLQRTSSGSSSSSSTPSSQ----PSSQGGSQPGSQAGSSERTRVRANSKSEGSPVLP 773
Query: 425 STPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDED 461
P K K + I+ + A S K +DED
Sbjct: 774 HEP-----AKVKPEESRDITRPSRPA--SYKKAIDED 803
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 34.7 bits (78), Expect = 0.21
Identities = 74/411 (18%), Positives = 147/411 (35%), Gaps = 31/411 (7%)
Query: 74 PGRPMGHLSKDVDEN----DSHEGEDQFLSLEASTETLVHVSDEDNNADLCLTDDKQVLN 129
PG +GH + D N DS++ +D+ + + SDE N D ++ +
Sbjct: 432 PGNKVGHSNTGSDSNSDGYDSYDFDDKSMQGDDPNS-----SDESNGNDDANSESDNNSS 486
Query: 130 TQGQKT--SGQHMIQGAGSLEKALPIIQSNQVS------SNSWGIAGETELALVKESGER 181
++G + S + G GS K S+ S SN G G + +SG+
Sbjct: 487 SRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDK-SDSGKG 545
Query: 182 KVTDSISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDPP 241
K S S S + N S+ D+ ++ ++ + D + +S +
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSDSSDS-NSSSDSDSSDSDSSDSSDSDSSDSSNSSDS 604
Query: 242 KDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFSQ 301
D ++ S ++ D+ + ++D + S + S + S S
Sbjct: 605 SDSSDSSD----SSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSS 660
Query: 302 HQNKSPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIMK 361
+ + S + D ++ + + +D+ E + D + DS
Sbjct: 661 NSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNS-SESSDSSDSSDSDSS------ 713
Query: 362 LDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTD 421
D D N+ + SS S ++ +S S + S + N S ++S+D
Sbjct: 714 -DSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSD 772
Query: 422 LPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNS 472
S+ +NS ++ S+ ++ S + + + S+ SNS
Sbjct: 773 SSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNS 823
Score = 33.5 bits (75), Expect = 0.46
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 363 DQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDL 422
D D D N +S+S + ++ + D S+S + S + + + SSD++S+D
Sbjct: 849 DGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDS 908
Query: 423 PSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLE-VDEDKSTKGSNFSNS 472
+S+ ++S ++ S+ ++ S + D S+ S+ SNS
Sbjct: 909 SNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNS 959
Score = 31.6 bits (70), Expect = 1.7
Identities = 67/394 (17%), Positives = 134/394 (34%), Gaps = 19/394 (4%)
Query: 82 SKDVDENDSHEGEDQFLSLEASTETLVHVSDEDNNADLCLTDDKQVLNTQGQKTSGQHMI 141
S D +DS + D S S+++ SD D+ +D ++ + S
Sbjct: 605 SDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSN 664
Query: 142 QGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGERK-VTDSISKSLELCNEISLS 200
S S+ SSNS + ++ + ES + +DS S + + S
Sbjct: 665 SSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSS 724
Query: 201 EIKDAPKVNAVDTLNVKDIAPEKQLLNSAVIAQQRRKPDPP--KDENERSTCNVVQNEFL 258
+ + ++ D+ N D + NS+ + + D ++ S + N
Sbjct: 725 DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSD 784
Query: 259 DTPCTNRGLPLLKTDFGSCLLQPPSCPNGMSAENGLEKSGFSQHQNKSPPKVKAEDGMQC 318
+N +D S + S+++ S + + S + D
Sbjct: 785 SNDSSN------SSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS 838
Query: 319 LQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIMKLDQLDQDIENALSTSSS 378
++ + + +D+ R D + S D D N S SS
Sbjct: 839 SDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSN-----SSDSSDSSDSNESSNSSD 893
Query: 379 PSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTT 438
S + + D +S S + S + + S + S+D +S+ +NS ++
Sbjct: 894 SSDSSNS-----SDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSS 948
Query: 439 AIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNS 472
S+ ++ S + + S+ S+ SNS
Sbjct: 949 DSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNS 982
Score = 30.4 bits (67), Expect = 3.9
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 361 KLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTEST 420
K D D D ++ ++S S + ++ S S S +D+ S + + SSD++S+
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSD--------SSDSNSSSDSDSSDSDSSD-SSDSDSS 596
Query: 421 DLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNSE 473
D +S+ ++S ++ S+ + + KS D D + S+ ++S+
Sbjct: 597 DSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSD 649
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 34.7 bits (78), Expect = 0.21
Identities = 57/258 (22%), Positives = 93/258 (36%), Gaps = 53/258 (20%)
Query: 246 ERSTCNVVQNEFLDTPCT--NRGLPLLKTDFGSCLLQ----PPSCPN------------- 286
E S CN +D C NR P+ K + + L PPS P
Sbjct: 392 EYSNCNYK----VDCACHKGNRNCPIQKRNPNATELPLLPPPPSLPTIGAETRRRKARRK 447
Query: 287 --GMSAENGLEKSGFSQHQNKSPPKVKAEDGMQCLQLKETLATQEPT---DNQVRLRKRK 341
M +N + Q + P KV + + E +E D+Q L +
Sbjct: 448 ELEMEQQNEASEENNDQQSQEVPEKVTVSSDHEEVDNPEEKPEEEKEEVIDDQENLAHSR 507
Query: 342 EIREDRDRARLDSMVLLIMK--------LDQLDQDIENALSTSSSPSGTPTNLRRHVPDL 393
REDR + + K L+Q + D+E +TS +P G T + P+
Sbjct: 508 RTREDRKVEAIMHAFENLEKRKKRRDQPLEQSNSDVEITTTTSETPVGEET--KTEAPES 565
Query: 394 ESGSE-------SGADTISVNQTRVNLSSDTESTDL-PSSTPVANSGTKPK-------TT 438
E + S ++ VN R + + D + L P P S +PK T+
Sbjct: 566 EVSNSVSNVTIPSTPQSVGVNTRRSSQAGDIAAEKLVPKPPPAKPSRPRPKSRISRYRTS 625
Query: 439 AIQGISEKEKAAVKSVKL 456
+ Q + +++A + +L
Sbjct: 626 SAQRLKRQKQANAQQAEL 643
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 34.3 bits (77), Expect = 0.27
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 374 STSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGT 433
ST ++P TPT SG+ + S N+T +L S T ST P TP + +
Sbjct: 1495 STHTAPPITPTT---------SGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTI 1545
Query: 434 KPKTTA 439
P T+
Sbjct: 1546 TPNPTS 1551
Score = 32.3 bits (72), Expect = 1.0
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 374 STSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGT 433
ST ++P TPT SG+ + S +T +L T ST P TP + +
Sbjct: 1888 STHTAPPMTPTT---------SGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNI 1938
Query: 434 KPKTTA 439
PK T+
Sbjct: 1939 TPKHTS 1944
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 33.9 bits (76), Expect = 0.35
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 394 ESGSESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTAIQGISEKEKAAVKS 453
ESGSESG S + N S +S+ S SG + K TA + K K+ +
Sbjct: 695 ESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSED 754
Query: 454 VKLEVDEDKSTKGSNFSNSEV 474
+ E ++ K++ SN +S +
Sbjct: 755 GEKENEKSKTSDSSNDESSSI 775
>gi|93141031 paralemmin isoform 1 [Homo sapiens]
Length = 387
Score = 33.9 bits (76), Expect = 0.35
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 340 RKEIREDRDRARL--DSMVLLIMKLDQLDQDIENALSTSSSPSGTPTNLRRHVPDLESGS 397
R+++++D + RL DS+ L +++ L++ ++A +T+ + P+ +R P
Sbjct: 71 RRQMQDDEQKTRLLEDSVSRLEKEIEVLERG-DSAPATAKENAAAPSPVRAPAPSPAKEE 129
Query: 398 ESGADTISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTAIQGISEKEKAAVKSVKLE 457
++ QT V D ++ P T + G S KAA+ SV++
Sbjct: 130 RKTEVVMNSQQTPVGTPKDKRVSNTPLRT-------------VDG-SPMMKAAMYSVEIT 175
Query: 458 VDEDKSTKGSNFSNSEVAIGLSP 480
V++DK T + +S + P
Sbjct: 176 VEKDKVTGETRVLSSTTLLPRQP 198
>gi|66529203 hypothetical protein LOC57714 [Homo sapiens]
Length = 1063
Score = 33.9 bits (76), Expect = 0.35
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 383 PTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSSTP-----VANSGTKPKT 437
PT + ++ E+G T S Q+ TE D +S P ++ GT P T
Sbjct: 166 PTEVGDSPLQAQALGEAGVATGSEAQSSPQFQDHTEGEDQDASIPSGGRGLSQEGTGPPT 225
Query: 438 TAIQGISEKEKAAVKSVKLEVDEDKSTKGSNFSNSEVAIGLS 479
+A +G S E AA + + E S G+ +E G S
Sbjct: 226 SAGEGHSRTEDAAQELLLPESKGGSSEPGTELQTTEQQAGAS 267
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 33.5 bits (75), Expect = 0.46
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 367 QDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSST 426
Q + S SSP+ TP + + +P SGS+ T + + +R +L+ DT ++ P+ST
Sbjct: 5790 QSNHSCTSMPSSPA-TPASGTKVIPS--SGSKLKRPTPTFHSSRTSLAGDTSNSSSPAST 5846
Query: 427 PVANSGTKPKTTA 439
+ PK +A
Sbjct: 5847 GAKTNRADPKKSA 5859
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 33.5 bits (75), Expect = 0.46
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 367 QDIENALSTSSSPSGTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDTESTDLPSST 426
Q + S SSP+ TP + + +P SGS+ T + + +R +L+ DT ++ P+ST
Sbjct: 5282 QSNHSCTSMPSSPA-TPASGTKVIPS--SGSKLKRPTPTFHSSRTSLAGDTSNSSSPAST 5338
Query: 427 PVANSGTKPKTTA 439
+ PK +A
Sbjct: 5339 GAKTNRADPKKSA 5351
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 33.1 bits (74), Expect = 0.60
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 306 SPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIMKLDQL 365
+PP K+ G C QE T Q+ R+ +E+ + D V + + +
Sbjct: 1288 TPPGQKSPSGPFCTPQSPVSLAQEGTA-QIWKRQSQEVEAGGIQTVEDEHVAELTLMGE- 1345
Query: 366 DQDIENALSTSSSPSGTP------------TNLRRHVP-------DLESGSESGADT--- 403
DI + ST P TP T+ R +P DL +GS G D
Sbjct: 1346 -GDISSPNSTLLPPPSTPQEVPGPSRPGSGTHGSRDLPVNRIIDVDLVTGSAPGRDGGIA 1404
Query: 404 -ISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTA 439
R S ++DLP PV KPKT+A
Sbjct: 1405 GAQAGPGRSQASGGPPTSDLPGLGPVPGEPAKPKTSA 1441
>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
sapiens]
Length = 799
Score = 33.1 bits (74), Expect = 0.60
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 306 SPPKVKAEDGMQCLQLKETLATQEPTDNQVRLRKRKEIREDRDRARLDSMVLLIMKLDQL 365
+PP K+ G C QE T Q+ R+ +E+ + D V + + +
Sbjct: 640 TPPGQKSPSGPFCTPQSPVSLAQEGTA-QIWKRQSQEVEAGGIQTVEDEHVAELTLMGE- 697
Query: 366 DQDIENALSTSSSPSGTP------------TNLRRHVP-------DLESGSESGADT--- 403
DI + ST P TP T+ R +P DL +GS G D
Sbjct: 698 -GDISSPNSTLLPPPSTPQEVPGPSRPGSGTHGSRDLPVNRIIDVDLVTGSAPGRDGGIA 756
Query: 404 -ISVNQTRVNLSSDTESTDLPSSTPVANSGTKPKTTA 439
R S ++DLP PV KPKT+A
Sbjct: 757 GAQAGPGRSQASGGPPTSDLPGLGPVPGEPAKPKTSA 793
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 32.7 bits (73), Expect = 0.78
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 72 DFPGRPMGHLSKDVDENDSHEGEDQFLS--LEASTETLVHVSDEDNNADLCLTDDKQVLN 129
D PG + DE+ E ED L L + + +SDE+ N DL +D++ N
Sbjct: 22 DKPGAERSWRRRAADEDWDSELEDDLLGEDLLSGKKNQSDLSDEELNDDLLQSDNEDEEN 81
Query: 130 TQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELALVKESGERKVTDSISK 189
Q + SL ++ S ++S N+ +GE E +E GE ++ S
Sbjct: 82 FSSQGVTI--------SLNATSGMVTSFELSDNTNDQSGEQESEYEQEQGEDELVYHKSD 133
Query: 190 SLEL 193
EL
Sbjct: 134 GSEL 137
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 32.7 bits (73), Expect = 0.78
Identities = 88/435 (20%), Positives = 169/435 (38%), Gaps = 60/435 (13%)
Query: 66 HGSELRDFPGRPMGHLSKDVD---------ENDSHE---GEDQFLSLEASTETLVHVSDE 113
H ++L P+ HL+KD++ EN + + GE LS AS+ + +
Sbjct: 936 HSAQLSSDHIIPLMHLAKDLNSQERSIPPSENQNSQESNGEGNCLSSSASSALAISSLAD 995
Query: 114 DNNADLCLTDDKQVLNTQGQKTSGQHMIQGAGSLEKALPIIQSNQVSSNSWGIAGETELA 173
C + +Q GQ + G GS P + S + + I G+ E +
Sbjct: 996 AATDSSCTSGAEQ---NDGQSIRKKRRATGDGSS----PELPSLERKNKRRKIKGKKERS 1048
Query: 174 LVKESGERKVTDS-ISKSLELCNEISLSEIKDAPKVNAVDTLNVKDIAPEKQLLNSAV-- 230
V + + + +SKSL+ C + +L + + A + V+ + + + + SA+
Sbjct: 1049 QVDQLLNISLREEELSKSLQ-CMDNNLLQARAALQTAYVEVQRLLMLKQQITMEMSALRT 1107
Query: 231 ----IAQQRRKPDPPKDENERSTCNVVQNEFLDTPCTNRGLPLLKTDFGSCLLQPPS--- 283
I Q ++ P + ++ C++ + T+ LL T F L+PPS
Sbjct: 1108 HRIQILQGLQETYEPSEHPDQVPCSLTRERRNSRSQTSIDAALLPTPFFPLFLEPPSSHV 1167
Query: 284 --CPNGMSAE---------NGLEKSGFSQHQNKSPPKVKAED--------GMQCLQLKET 324
P G S + +G + S Q K P +D C KE
Sbjct: 1168 SPSPTGASLQITTSPTFQTHGSVPAPDSSVQIKQEPMSPEQDENVNAVPPSSACNVSKEL 1227
Query: 325 L-ATQEPTDN---QVRLRKRKEIREDRDRARLDSMVLLIMKLDQLDQDIENALSTSSSPS 380
L A +E +D+ + R + E + S L K ++ N ++ SS S
Sbjct: 1228 LEANREISDSCPVYPVITARLSLPESTESFHEPSQEL---KFSVEQRNTRNRENSPSSQS 1284
Query: 381 GTPTNLRRHVPDLESGSESGADTISVNQTRVNLSSDT---ESTDLPSSTPVANSGTKPKT 437
+++ + + G+ SG++ + + R++ +S+T + P+ P + + +
Sbjct: 1285 AGLSSINKEGEEPTKGN-SGSEACTSSFLRLSFASETPLEKEPHSPADQPEQQAESTLTS 1343
Query: 438 TAIQGISEKEKAAVK 452
+G +K+K K
Sbjct: 1344 AETRGSKKKKKLRKK 1358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,392,710
Number of Sequences: 37866
Number of extensions: 885959
Number of successful extensions: 3106
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2937
Number of HSP's gapped (non-prelim): 198
length of query: 498
length of database: 18,247,518
effective HSP length: 106
effective length of query: 392
effective length of database: 14,233,722
effective search space: 5579619024
effective search space used: 5579619024
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.