PALM 37393

Name: PALM	Sequence: fasta or formatted (387aa)		NCBI GI: 93141031
Description: paralemmin isoform 1		Referenced in: Synapses
Other entries for this name: alt prot [343aa] paralemmin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 41 3 C cysteine 0.8 3 2 D aspartate 5.2 20 2 E glutamate 12.7 49 2 F phenylalanine 0.3 1 1 G glycine 5.7 22 1 H histidine 1.3 5 1 I isoleucine 3.4 13 1 K lysine 6.2 24 2 L leucine 6.7 26 2 M methionine 2.6 10 2 N asparagine 2.1 8 1 P proline 7.8 30 2 Q glutamine 5.4 21 2 R arginine 6.7 26 2 S serine 7.0 27 3 T threonine 8.0 31 2 V valine 6.7 26 2 W tryptophan 0.3 1 1 Y tyrosine 0.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paralemmin isoform 1 PALM 0.856 paralemmin isoform 2 PALM2 0.290 paralemmin 2 isoform a PALM2 0.282 paralemmin 2 isoform b PALMD 0.142 palmdelphin PALM2-AKAP2 0.116 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.116 PALM2-AKAP2 protein isoform 1 PALM3 0.062 hypothetical protein LOC342979 KIAA1598 0.044 shootin1 isoform a MAP7D1 0.040 MAP7 domain containing 1 PLEC1 0.040 plectin 1 isoform 11 PLEC1 0.040 plectin 1 isoform 10 PLEC1 0.040 plectin 1 isoform 8 PLEC1 0.040 plectin 1 isoform 7 PLEC1 0.040 plectin 1 isoform 6 PLEC1 0.040 plectin 1 isoform 3 PLEC1 0.040 plectin 1 isoform 2 PLEC1 0.040 plectin 1 isoform 1 MAP4K4 0.034 mitogen-activated protein kinase kinase kinase kinas... ACBD3 0.030 acyl-Coenzyme A binding domain containing 3 MYH11 0.029 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.029 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.029 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.029 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... KIAA1598 0.029 shootin1 isoform b MAP4K4 0.027 mitogen-activated protein kinase kinase kinase kinas... TNIK 0.027 TRAF2 and NCK interacting kinase isoform 6 TNIK 0.027 TRAF2 and NCK interacting kinase isoform 5 ENAH 0.026 enabled homolog isoform a ENAH 0.026 enabled homolog isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.