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Search of human proteins with 33186925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33186925 AMP-activated protein kinase gamma2 subunit isoform
a [Homo sapiens]
(569 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33186925 AMP-activated protein kinase gamma2 subunit isoform ... 1128 0.0
gi|100913192 AMP-activated protein kinase gamma2 subunit isoform... 1043 0.0
gi|100913189 AMP-activated protein kinase gamma2 subunit isoform... 643 0.0
gi|4506061 AMP-activated protein kinase, noncatalytic gamma-1 su... 473 e-133
gi|47132577 AMP-activated protein kinase, non-catalytic gamma-3 ... 420 e-117
gi|47132575 AMP-activated protein kinase, noncatalytic gamma-1 s... 370 e-102
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 1e-05
gi|188536004 zinc finger protein 469 [Homo sapiens] 47 4e-05
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 46 8e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 1e-04
gi|146198654 zinc finger protein 768 [Homo sapiens] 45 2e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 44 4e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 4e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 44 4e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 44 4e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 44 4e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 44 4e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 7e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 43 7e-04
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 43 9e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 43 9e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 43 9e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 43 9e-04
gi|189491742 ataxin 7 isoform b [Homo sapiens] 42 0.002
gi|4506797 ataxin 7 isoform a [Homo sapiens] 42 0.002
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 42 0.002
gi|210032580 SET domain containing 1B [Homo sapiens] 41 0.003
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.003
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 40 0.006
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 40 0.006
>gi|33186925 AMP-activated protein kinase gamma2 subunit isoform a
[Homo sapiens]
Length = 569
Score = 1128 bits (2917), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Query: 1 MGSAVMDTKKKKDVSSPGGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSS 60
MGSAVMDTKKKKDVSSPGGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSS
Sbjct: 1 MGSAVMDTKKKKDVSSPGGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSS 60
Query: 61 RKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRR 120
RKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRR
Sbjct: 61 RKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRR 120
Query: 121 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 180
MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY
Sbjct: 121 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 180
Query: 181 KHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEA 240
KHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEA
Sbjct: 181 KHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEA 240
Query: 241 GMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANG 300
GMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANG
Sbjct: 241 GMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANG 300
Query: 301 VRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKP 360
VRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKP
Sbjct: 301 VRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKP 360
Query: 361 LVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAF 420
LVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAF
Sbjct: 361 LVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAF 420
Query: 421 MKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVIN 480
MKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVIN
Sbjct: 421 MKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVIN 480
Query: 481 LAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADS 540
LAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADS
Sbjct: 481 LAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADS 540
Query: 541 IVGIISLSDILQALILTPAGAKQKETETE 569
IVGIISLSDILQALILTPAGAKQKETETE
Sbjct: 541 IVGIISLSDILQALILTPAGAKQKETETE 569
>gi|100913192 AMP-activated protein kinase gamma2 subunit isoform c
[Homo sapiens]
Length = 525
Score = 1043 bits (2697), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 45 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 104
MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT
Sbjct: 1 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 60
Query: 105 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 164
VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS
Sbjct: 61 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 120
Query: 165 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 224
TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA
Sbjct: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 180
Query: 225 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 284
PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD
Sbjct: 181 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 240
Query: 285 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 344
TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH
Sbjct: 241 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 300
Query: 345 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 404
KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI
Sbjct: 301 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 360
Query: 405 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 464
LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD
Sbjct: 361 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 420
Query: 465 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 524
ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI
Sbjct: 421 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 480
Query: 525 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 569
VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE
Sbjct: 481 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 525
>gi|100913189 AMP-activated protein kinase gamma2 subunit isoform b
[Homo sapiens]
Length = 328
Score = 643 bits (1659), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 242 MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV 301
MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV
Sbjct: 1 MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV 60
Query: 302 RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL 361
RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL
Sbjct: 61 RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL 120
Query: 362 VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM 421
VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM
Sbjct: 121 VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM 180
Query: 422 KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 481
KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL
Sbjct: 181 KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 240
Query: 482 AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI 541
AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI
Sbjct: 241 AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI 300
Query: 542 VGIISLSDILQALILTPAGAKQKETETE 569
VGIISLSDILQALILTPAGAKQKETETE
Sbjct: 301 VGIISLSDILQALILTPAGAKQKETETE 328
>gi|4506061 AMP-activated protein kinase, noncatalytic gamma-1
subunit isoform 1 [Homo sapiens]
Length = 331
Score = 473 bits (1218), Expect = e-133
Identities = 233/303 (76%), Positives = 270/303 (89%)
Query: 255 DSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSF 314
+S + VY FM+SH+CYD++PTSSKLVVFDT+LQVKKAFFALV NGVRAAPLW+SKKQSF
Sbjct: 23 ESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSF 82
Query: 315 VGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAV 374
VGMLTITDFINILHRYYKS +VQIYELEEHKIETWRE+YLQ++FKPLV ISP+ASLFDAV
Sbjct: 83 VGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAV 142
Query: 375 YSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYH 434
SLI+NKIHRLPVIDP SGN LYILTHKRILKFL+LF+++ PKP FM ++L+EL IGTY
Sbjct: 143 SSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYA 202
Query: 435 NIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITV 494
NIA + TP+ AL IFV+ R+SALPVVDE G+VVDIYSKFDVINLAAEKTYNNLD++V
Sbjct: 203 NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSV 262
Query: 495 TQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQAL 554
T+ALQHRS YFEGV+KC E LETI++R+V AEVHRLVVV+E D + GI+SLSDILQAL
Sbjct: 263 TKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 322
Query: 555 ILT 557
+LT
Sbjct: 323 VLT 325
>gi|47132577 AMP-activated protein kinase, non-catalytic gamma-3
subunit [Homo sapiens]
Length = 489
Score = 420 bits (1079), Expect = e-117
Identities = 200/316 (63%), Positives = 267/316 (84%), Gaps = 1/316 (0%)
Query: 245 KLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAA 304
KL ++DE + + +YMRFM+ H CYD + TSSKLV+FDT L++KKAFFALVANGVRAA
Sbjct: 169 KLGWDDE-LRKPGAQIYMRFMQEHTCYDAMATSSKLVIFDTMLEIKKAFFALVANGVRAA 227
Query: 305 PLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNI 364
PLW+SKKQSFVGMLTITDFI +LHRYY+SP+VQIYE+E+HKIETWRE+YLQ FKPLV+I
Sbjct: 228 PLWDSKKQSFVGMLTITDFILVLHRYYRSPLVQIYEIEQHKIETWREIYLQGCFKPLVSI 287
Query: 365 SPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQN 424
SP+ SLF+AVY+LIKN+IHRLPV+DP+SGN L+ILTHKR+LKFL +F S +P+P+F+ +
Sbjct: 288 SPNDSLFEAVYTLIKNRIHRLPVLDPVSGNVLHILTHKRLLKFLHIFGSLLPRPSFLYRT 347
Query: 425 LDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAE 484
+ +LGIGT+ ++A + PI+ AL+IFV+RR+SALPVV+E G+VV +YS+FDVI+LAA+
Sbjct: 348 IQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFDVIHLAAQ 407
Query: 485 KTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGI 544
+TYN+LD++V +AL+ R+ EGV+ C E L ++DRI R +VHRLV+V+E ++G+
Sbjct: 408 QTYNHLDMSVGEALRQRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGV 467
Query: 545 ISLSDILQALILTPAG 560
+SLSDILQAL+L+PAG
Sbjct: 468 VSLSDILQALVLSPAG 483
>gi|47132575 AMP-activated protein kinase, noncatalytic gamma-1
subunit isoform 2 [Homo sapiens]
Length = 247
Score = 370 bits (950), Expect = e-102
Identities = 184/241 (76%), Positives = 213/241 (88%)
Query: 317 MLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAVYS 376
MLTITDFINILHRYYKS +VQIYELEEHKIETWRE+YLQ++FKPLV ISP+ASLFDAV S
Sbjct: 1 MLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSS 60
Query: 377 LIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNI 436
LI+NKIHRLPVIDP SGN LYILTHKRILKFL+LF+++ PKP FM ++L+EL IGTY NI
Sbjct: 61 LIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANI 120
Query: 437 AFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQ 496
A + TP+ AL IFV+ R+SALPVVDE G+VVDIYSKFDVINLAAEKTYNNLD++VT+
Sbjct: 121 AMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTK 180
Query: 497 ALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALIL 556
ALQHRS YFEGV+KC E LETI++R+V AEVHRLVVV+E D + GI+SLSDILQAL+L
Sbjct: 181 ALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 240
Query: 557 T 557
T
Sbjct: 241 T 241
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 48.9 bits (115), Expect = 1e-05
Identities = 58/196 (29%), Positives = 79/196 (40%), Gaps = 28/196 (14%)
Query: 67 FGPGSP-----SKGFFSRGPQPRPSSPMSAPVRPKTSPGSPK------TVFPFSYQESP- 114
+ P SP S + P P+SP +P P SP SP+ T P S SP
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 115 -----PRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSS--SPSTPT 167
P SP+ S + SS E +P S P SP ++ S K S S SP+TP
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1887
Query: 168 QVTKQHTFPLESYKHEPERLENRIYASSSP--PDTGQRFCPSS-FQSPTRP--PLASPTH 222
T+ S + P + Y+ +SP T ++ P+S SPT P SPT
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPK---YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1944
Query: 223 YAPSKAAALAAALGPA 238
S + + PA
Sbjct: 1945 PGYSPTSPTYSLTSPA 1960
Score = 45.1 bits (105), Expect = 2e-04
Identities = 54/161 (33%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 67 FGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQ-ESPPRSPRRMSFSG 125
+ P SPS + P P+SP +P P SP SP SY SP SP S+S
Sbjct: 1692 YSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSYSPTSPSYSP 1743
Query: 126 IFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPE 185
+ S +SPN P TSP +S + + +S TPT T P S
Sbjct: 1744 TSPNYS-PTSPNYTP-TSPS----YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSY 1797
Query: 186 RLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 226
+ Y+ SSP R+ P QSPT P +SP+ Y+PS
Sbjct: 1798 SPTSPSYSPSSP-----RYTP---QSPTYTP-SSPS-YSPS 1828
Score = 44.3 bits (103), Expect = 3e-04
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 67 FGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESP------PRSPRR 120
+ P SPS + P+ P+SP +P PK SP SPK P S SP P SP
Sbjct: 1839 YTPTSPS--YSPSSPEYTPTSPKYSPTSPKYSPTSPK-YSPTSPTYSPTTPKYSPTSPTY 1895
Query: 121 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTS-----GLSSSPSTPTQVTKQHTF 175
S ++ +S + SP S P SP ++ S S G + SP++P T+
Sbjct: 1896 SPTSPVYTPTSPKYSPTS-PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTY 1954
Query: 176 PLESYKHEPE 185
L S P+
Sbjct: 1955 SLTSPAISPD 1964
Score = 38.5 bits (88), Expect = 0.017
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 17/166 (10%)
Query: 65 SPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFS 124
SP PG S S G PS ++P SPG P SP SP S+S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 125 GIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEP 184
+SPN +P TSP S S + S SP++P+ ++ S + P
Sbjct: 1631 --------PTSPNYSP-TSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Query: 185 ERLENRIYASSSP--PDTGQRFCPSSFQSPTRPPLASPT--HYAPS 226
+ Y+ +SP T + P+S P SPT Y+P+
Sbjct: 1681 ---TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 47.4 bits (111), Expect = 4e-05
Identities = 53/180 (29%), Positives = 71/180 (39%), Gaps = 27/180 (15%)
Query: 87 SPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGG 146
SP T PG+ F + + P + + +S ES P +PAT+ G
Sbjct: 544 SPALFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSLPPPRVVGASPSES-PLPSPATNTAG 602
Query: 147 IRFFSRSRKTSGLSSSPSTPTQVTKQHTFPL--ESYKHEPERLENRIYASSSPPDTGQRF 204
S S +SSSP+ P+ Q PL ++ H P + P +TG
Sbjct: 603 ----STCSSLSPMSSSPANPSSEESQLPGPLGPSAFFHPP----------THPQETG--- 645
Query: 205 CPSSFQSPTRPPLASPTHYAPSKAAAL---AAALGPAEA-GMLEKLEFEDEAVEDSESGV 260
S F SP PP + PTHY P A A A LG A LE+ F E E G+
Sbjct: 646 --SPFPSP-EPPHSLPTHYQPEPAKAFPFPADGLGAEGAFQCLEETPFPHEGPEVGRGGL 702
Score = 30.4 bits (67), Expect = 4.6
Identities = 46/180 (25%), Positives = 60/180 (33%), Gaps = 20/180 (11%)
Query: 68 GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
G GS G S G +PR + + RP P P+T P S + PR PR +
Sbjct: 966 GSGSGGGGRAS-GLRPRRNDGLGE--RPPPRPRRPRTQAPGSRADPAPRVPRAAALPEET 1022
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 187
RSS + P P P R RK G + ++ +Q L Y E
Sbjct: 1023 RSSRRRRLP---PRKDP-------RKRKARGGAWGKELILKIVQQKN-RLREYDFASESE 1071
Query: 188 ENRIYASSSPPDTGQRFCPSS------FQSPTRPPLASPTHYAPSKAAALAAALGPAEAG 241
E+ P G+R Q P P A +A A P E G
Sbjct: 1072 EDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAPANPEEPG 1131
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 46.2 bits (108), Expect = 8e-05
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 26/225 (11%)
Query: 23 KKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSP---FGPGSPSKGFFSR 79
KK+ +K +S+ V + D + A G + RKV P +P +
Sbjct: 505 KKDGLRKIQSMGVRVMDTNWVAR---------RGSSAGRKVSCAPPSMQPPAPPAELAAP 555
Query: 80 GPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSN 139
P P P P+ +P P SP Q P R+ S + S+++ SP S+
Sbjct: 556 LPSPLPEQPLDSPAAPALSPSG------LGLQPGPERTSTTKS-KELSPGSAQKGSPGSS 608
Query: 140 PATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHE--PERLENRIYASSSP 197
T+ G + ++ G S SPS P HT S K P ++ + +
Sbjct: 609 QGTACAGTQPGAQPGAQPGASPSPSQPPADQSPHTLRKVSKKLAPIPPKVPFGQPGAMAD 668
Query: 198 PDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAAALAAA-LGPAEA 240
GQ PS SPT P SP + + +LA+ L PA A
Sbjct: 669 QSAGQ---PSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAA 710
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 45.4 bits (106), Expect = 1e-04
Identities = 45/179 (25%), Positives = 63/179 (35%), Gaps = 18/179 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P SP G + P+ P++P + P PK P +P P +PP + G+
Sbjct: 1225 PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP----PPKGAPTPPAATPPSLKGGLAT 1280
Query: 129 SSSKES---------SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 179
K + SP PATSP + SP TP P
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP----PPKGAPTPP 1336
Query: 180 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPA 238
P +++P G PSS + PT PP A+P+H + GPA
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT-PPAATPSHKGGPAMTPPSPKRGPA 1394
Score = 37.4 bits (85), Expect = 0.037
Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 23/187 (12%)
Query: 65 SPFG-PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSP---GSPKTVFPFSYQESPPRSPRR 120
SP G PG+P P P SP P P T+P G P T P +P
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 121 MSFSGIFRSSSKES----SPNSNPATSPGGIRFFSRSRKTSGLS-SSPSTPTQ--VTKQH 173
+ S K SP +P TSP I + + ++ +TP++ +T
Sbjct: 1379 KGGPAMTPPSPKRGPAIPSPKGDP-TSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Query: 174 TFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAA 233
P+ S K P A+S+P G PSS PT P + P+ P +A
Sbjct: 1438 VTPV-SLKKAP--------ATSAPK--GGPATPSSKGDPTLPAVTPPSPKEPPAPKQVAT 1486
Query: 234 ALGPAEA 240
+ P +A
Sbjct: 1487 SSSPKKA 1493
Score = 35.4 bits (80), Expect = 0.14
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 65 SPFGPGSPSKGFFSRGPQPRPSSP--MSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMS 122
SP P +P + S P+ P++P M AP P P SPK V P +P
Sbjct: 1474 SPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAP---- 1529
Query: 123 FSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGL---SSSPSTPT--QVTKQHTFPL 177
+ S ++ A P + S +KT + +P+TP+ + +
Sbjct: 1530 -TATLLSKKTPATLAPKEALIPPAMTVPS-PKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 178 ESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALG 236
+YK P E I PP PS ++PT P + P +P K A A G
Sbjct: 1588 STYKGAPSPKELLI-----PPAVTS---PSPKEAPTPPAVTPP---SPEKGPATPAPKG 1635
Score = 34.7 bits (78), Expect = 0.24
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 133 ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHT----FPLESYKHEPERLE 188
E S S A+S G + + + S G+S SP T TK+ + P+ + +E
Sbjct: 773 EDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE 832
Query: 189 NRIYASSSPPDTGQRFCPSSFQSPTRP-PLASPTHYAPSKAAALAAALGPAE 239
+S G + P++ SPT P P +PT A + + L P E
Sbjct: 833 ASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKE 884
Score = 34.7 bits (78), Expect = 0.24
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P SP G + P+ P++P + P PK +P + + P SP+ G+
Sbjct: 1133 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK----GGLAT 1188
Query: 129 SSSK--ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTP--TQVTKQHTFPLESYKHEP 184
S K ++P + P + GG+ T +P+TP T + + S K P
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGL-------ATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1241
Query: 185 ERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALA 232
A++ P G P +PT PP A+P PS LA
Sbjct: 1242 -----TTPAATPPSPKGGPATPPPKGAPT-PPAATP----PSLKGGLA 1279
Score = 33.9 bits (76), Expect = 0.41
Identities = 51/195 (26%), Positives = 68/195 (34%), Gaps = 20/195 (10%)
Query: 52 LEGSGKHSSRKVDSPFG-PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVF---- 106
+ S +R +P G P SPS P+ P+ P + P PK P +P +
Sbjct: 913 MTSSSPKKARATPAPKGIPASPS-------PKGAPTPPAATPPSPKGGPATPSPKWAPTP 965
Query: 107 PFSYQESPPRSPRRMSFSGI-FRSSSKESSPNSNPAT-SPGGIRFFSRSRKTSGLSSSPS 164
P + SP P S G ++ SP PAT SP G S S +
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025
Query: 165 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPL-ASPTHY 223
TP K + P + P+ P T PS P P L +PT
Sbjct: 1026 TP--FPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPT-- 1081
Query: 224 APSKAAALAAALGPA 238
P A + GPA
Sbjct: 1082 -PPAATPPSPKGGPA 1095
Score = 33.9 bits (76), Expect = 0.41
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 31/163 (19%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P SP G + P+ P++P + P PK +P + + P SP+ G+
Sbjct: 1156 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK----GGLAT 1211
Query: 129 SSSK--ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
S K ++P + P + GG+ T +P+TP S K P
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGL-------ATPSPKGAPTTPAATP-------PSPKGGP-- 1255
Query: 187 LENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY-APSKA 228
++PP G P++ + LA+P H AP+ A
Sbjct: 1256 --------ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Score = 33.5 bits (75), Expect = 0.54
Identities = 43/181 (23%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P SP G + P+ P+ P + P PK P +P + + P SP+ G
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK-----GGPA 1001
Query: 129 SSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE 188
+ S + +P T P + + G S+ P+ K K P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAP---- 1057
Query: 189 NRIYASSSPPDTGQRFCPSSFQSPTRP------PLASPTHYAPSKAAALAAALGPAEAGM 242
A++ P G PS +PT P P P +P A AA P+ G
Sbjct: 1058 -TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG 1116
Query: 243 L 243
L
Sbjct: 1117 L 1117
Score = 33.5 bits (75), Expect = 0.54
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 26/156 (16%)
Query: 60 SRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPR 119
S K P SP +G P+ P+SP P+ PK +P +P T
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVT--------------- 1421
Query: 120 RMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 179
G S + +P PA +P ++ ++ TS P+TP+ T P +
Sbjct: 1422 ---REGAATPSKGDLTP---PAVTPVSLK---KAPATSAPKGGPATPSS-KGDPTLPAVT 1471
Query: 180 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRP 215
E + A+SS P P+ +PT P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPA-TPAPMGAPTLP 1506
Score = 33.1 bits (74), Expect = 0.70
Identities = 47/186 (25%), Positives = 66/186 (35%), Gaps = 32/186 (17%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRM--SFSGI 126
P SP G P SP AP+ P +P SPK + P +P S G
Sbjct: 1087 PPSPKGG-------PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Query: 127 FRSSSKESSPNSNPATSP---GGIRFFSRSRKTSGLSSSPSTP--TQVTKQHTFPLESYK 181
+ + +P + AT P GG+ T +P+TP T + + S K
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGL-------ATPPPKGAPTTPAATPPSPKGGLATPSPK 1192
Query: 182 HEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY------APSKAAALAAAL 235
P A++ P G PS +PT P P+ +P A AA
Sbjct: 1193 GAP-----TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1247
Query: 236 GPAEAG 241
P+ G
Sbjct: 1248 PPSPKG 1253
Score = 32.7 bits (73), Expect = 0.92
Identities = 46/184 (25%), Positives = 62/184 (33%), Gaps = 29/184 (15%)
Query: 68 GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
GP +PS P P SP P P SPK P +PP SP+ G
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATP-----SPKGA-PMPPAATPP-SPK-----GGL 1117
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSP--STPTQVTKQHTFPLESYKHEPE 185
+ + +P + AT P GL++ P PT P P
Sbjct: 1118 ATPPHKGAPTTPAATPPS---------PKGGLATPPPKGAPTTPAATPPSPKGGLATPPP 1168
Query: 186 RLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY------APSKAAALAAALGPAE 239
+ A++ P G PS +PT P P+ +P A AA P+
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 240 AGML 243
G L
Sbjct: 1229 KGGL 1232
Score = 32.0 bits (71), Expect = 1.6
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 27/191 (14%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTV-------FPFSYQESPPR----- 116
P SP KG + P+ P+SP P K SP SP +V P + + P +
Sbjct: 1621 PPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTA 1680
Query: 117 ------SPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSG----LSSSPSTP 166
+P S I + K + ATSP S + G ++ +P P
Sbjct: 1681 LKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLP 1740
Query: 167 TQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 226
Q T + H P+ + +S P T ++F+ P ++ APS
Sbjct: 1741 VQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTA-----AAFEKVLPKPESASVSAAPS 1795
Query: 227 KAAALAAALGP 237
+L A P
Sbjct: 1796 PPVSLPLAPSP 1806
Score = 31.6 bits (70), Expect = 2.0
Identities = 46/223 (20%), Positives = 79/223 (35%), Gaps = 30/223 (13%)
Query: 44 AMPLLDGDLEGSGKHSSRKVDSPFGPGSPS-KGFFSRGPQPRP---SSPMSAPVRPKTSP 99
A PL D G +++ + SP +G S P+ P + + P+ P S
Sbjct: 647 AFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASE 706
Query: 100 GSP------KTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRS 153
P T P + P P+ + SP+ PA +P G +
Sbjct: 707 NCPVAPSPQNTCAPLATLVLAPEIPKSVP------------SPSLPPAGTPPGTKKVDGI 754
Query: 154 RKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPT 213
TS L+ S+P + + + + + Y + SP G P + + PT
Sbjct: 755 SHTSALAPVASSPKECPTEDSGASATASSK----GTLTYLADSPSPLGVSVSPQTKRPPT 810
Query: 214 RPPLASPTHYAPSKAAALAAALGPAEAGMLEKLEFEDEAVEDS 256
+ A P + L++ + P EA L + + +DS
Sbjct: 811 KKGSAGP----DTPIGNLSSPVSPVEASFLPENSLSFQGSKDS 849
Score = 31.6 bits (70), Expect = 2.0
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 83 PRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSF--SGIFRSSSKESSPNSNP 140
P P SP AP +P SPK V +E+P S + F G + K++ S
Sbjct: 856 PTPPSPKGAPTPSAVTPLSPKGV-TLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMT 914
Query: 141 ATSPGGIRFFSRSRKTSGLSSSPS---TPTQVTKQHTFPLESYKHEPERLENRIYASSSP 197
++SP R + G+ +SPS PT P + A++ P
Sbjct: 915 SSSPKKAR---ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 198 PDTGQRFCPSSFQSPTRPPLASP 220
G PS +PT PP A+P
Sbjct: 972 SPKGGPATPSPKGAPT-PPAATP 993
>gi|146198654 zinc finger protein 768 [Homo sapiens]
Length = 540
Score = 44.7 bits (104), Expect = 2e-04
Identities = 62/211 (29%), Positives = 77/211 (36%), Gaps = 27/211 (12%)
Query: 53 EGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQE 112
EGSG + ++ PFG S GF + P+ P SP P P SP V P E
Sbjct: 44 EGSGDYEVEEI--PFGLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPP--SPE 99
Query: 113 SPPRSPRRMSFSGIFRSSS---KESSPNSNPAT------SPGGIRFFSR--SRKTSGLSS 161
PRSP S S F S S + SP P + SPG SR S+ T +
Sbjct: 100 FAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQ 159
Query: 162 SPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD----------TGQRFCPSSFQS 211
SP Q +K E + E+ I P D TG F+
Sbjct: 160 SPEFEAQSSKFQE-GAEMLLNPEEKSPLNISVGVHPLDSFTQGFGEQPTGDLPIGPPFEM 218
Query: 212 PTRPPLASPTHYAPSKAAALAAAL-GPAEAG 241
PT L++P L AL GP G
Sbjct: 219 PTGALLSTPQFEMLQNPLGLTGALRGPGRRG 249
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/199 (24%), Positives = 70/199 (35%), Gaps = 42/199 (21%)
Query: 52 LEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQ 111
L+GS +S+KV P GPGSP + + + PV PK P
Sbjct: 1239 LQGSPTPTSKKVPLP-GPGSP---------EVKRAHGTPPPVSPKPPP------------ 1276
Query: 112 ESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTK 171
PP +P+ + S S SP +PA P + L+ P TP +
Sbjct: 1277 --PPTAPKPVKAVAGLPSGSAGPSPAPSPARQP-----------PAALAKPPGTPPSLGA 1323
Query: 172 QHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAAL 231
P P ++ + PP ++ P P ASP A K
Sbjct: 1324 SPAKP-------PSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEET 1376
Query: 232 AAALGPAEAGMLEKLEFED 250
+A L A + EK+ ED
Sbjct: 1377 SACLAAALQAVEEKIRQED 1395
Score = 32.3 bits (72), Expect = 1.2
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 39/173 (22%)
Query: 81 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKES------ 134
P P P P +P SP T Q SP + +++ G K +
Sbjct: 1210 PLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPP 1269
Query: 135 -SPN-SNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIY 192
SP P T+P + + +GL S + P+ P S +P
Sbjct: 1270 VSPKPPPPPTAPKPV------KAVAGLPSGSAGPS--------PAPSPARQPPA------ 1309
Query: 193 ASSSPPDTGQRFCPSSFQSPTRPPL-ASPTHYAPSK------AAALAAALGPA 238
A + PP T PS SP +PP +P + P+K AAA AAA PA
Sbjct: 1310 ALAKPPGTP----PSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPA 1358
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 126
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 540 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 599
Query: 127 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 600 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 659
Query: 187 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 221
+ +P T G S +PT P +PT
Sbjct: 660 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 695
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 59 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 118
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 375 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 431
Query: 119 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 178
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 432 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 486
Query: 179 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
K P E A ++P P T + P++ + PT P P AA
Sbjct: 487 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 539
Score = 36.6 bits (83), Expect = 0.064
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 46/235 (19%)
Query: 8 TKKKKDVSSPGG---SGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKH-SSRKV 63
T K S+ G + K+ S ++ S + P A P + G ++ K
Sbjct: 156 TTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKE 215
Query: 64 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPP 115
+P P P+ + +P P++ SAP PK ++P +PK P + +E P
Sbjct: 216 PTPTTPKEPAS---TTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 272
Query: 116 RSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+P+ + +++KE +P + ++S T+ +P+TP + T
Sbjct: 273 TTPKEPA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TT 313
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 229
P E P+ P T + P++ + +PT P +PT AP K A
Sbjct: 314 PKEPAPTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 357
Score = 35.8 bits (81), Expect = 0.11
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 120
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 508 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 567
Query: 121 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 627
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 226
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 628 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 671
Score = 34.3 bits (77), Expect = 0.32
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 311 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 365
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 187
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 366 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 421
Query: 188 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 221
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 422 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 461
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 126
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 581 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 640
Query: 127 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 641 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 700
Query: 187 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 221
+ +P T G S +PT P +PT
Sbjct: 701 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 736
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 59 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 118
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 416 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 472
Query: 119 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 178
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 473 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 527
Query: 179 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
K P E A ++P P T + P++ + PT P P AA
Sbjct: 528 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 580
Score = 36.6 bits (83), Expect = 0.064
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 46/235 (19%)
Query: 8 TKKKKDVSSPGG---SGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKH-SSRKV 63
T K S+ G + K+ S ++ S + P A P + G ++ K
Sbjct: 197 TTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKE 256
Query: 64 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPP 115
+P P P+ + +P P++ SAP PK ++P +PK P + +E P
Sbjct: 257 PTPTTPKEPAS---TTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 313
Query: 116 RSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+P+ + +++KE +P + ++S T+ +P+TP + T
Sbjct: 314 TTPKEPA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TT 354
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 229
P E P+ P T + P++ + +PT P +PT AP K A
Sbjct: 355 PKEPAPTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 398
Score = 35.8 bits (81), Expect = 0.11
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 120
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 549 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 608
Query: 121 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 668
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 226
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 669 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 712
Score = 34.3 bits (77), Expect = 0.32
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 352 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 406
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 187
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 407 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 462
Query: 188 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 221
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 463 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 502
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 126
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 633 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 692
Query: 127 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 693 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 752
Query: 187 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 221
+ +P T G S +PT P +PT
Sbjct: 753 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 788
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 59 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 118
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 468 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 524
Query: 119 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 178
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 525 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 579
Query: 179 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
K P E A ++P P T + P++ + PT P P AA
Sbjct: 580 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 632
Score = 36.6 bits (83), Expect = 0.064
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 46/235 (19%)
Query: 8 TKKKKDVSSPGG---SGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKH-SSRKV 63
T K S+ G + K+ S ++ S + P A P + G ++ K
Sbjct: 249 TTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKE 308
Query: 64 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPP 115
+P P P+ + +P P++ SAP PK ++P +PK P + +E P
Sbjct: 309 PTPTTPKEPAS---TTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 365
Query: 116 RSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+P+ + +++KE +P + ++S T+ +P+TP + T
Sbjct: 366 TTPKEPA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TT 406
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 229
P E P+ P T + P++ + +PT P +PT AP K A
Sbjct: 407 PKEPAPTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 450
Score = 35.8 bits (81), Expect = 0.11
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 120
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 601 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 660
Query: 121 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 720
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 226
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 721 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 764
Score = 34.3 bits (77), Expect = 0.32
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 404 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 458
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 187
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 459 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 514
Query: 188 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 221
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 515 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 554
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 126
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 674 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 733
Query: 127 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 734 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 793
Query: 187 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 221
+ +P T G S +PT P +PT
Sbjct: 794 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 829
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 59 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 118
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 509 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Query: 119 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 178
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 566 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 620
Query: 179 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
K P E A ++P P T + P++ + PT P P AA
Sbjct: 621 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 673
Score = 36.6 bits (83), Expect = 0.064
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 46/235 (19%)
Query: 8 TKKKKDVSSPGG---SGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKH-SSRKV 63
T K S+ G + K+ S ++ S + P A P + G ++ K
Sbjct: 290 TTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKE 349
Query: 64 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPP 115
+P P P+ + +P P++ SAP PK ++P +PK P + +E P
Sbjct: 350 PTPTTPKEPAS---TTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP 406
Query: 116 RSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+P+ + +++KE +P + ++S T+ +P+TP + T
Sbjct: 407 TTPKEPA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TT 447
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 229
P E P+ P T + P++ + +PT P +PT AP K A
Sbjct: 448 PKEPAPTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 491
Score = 35.8 bits (81), Expect = 0.11
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 120
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 642 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Query: 121 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 175
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 761
Query: 176 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 226
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 762 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 805
Score = 34.3 bits (77), Expect = 0.32
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 445 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 499
Query: 128 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 187
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 500 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 555
Query: 188 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 221
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 595
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 43.9 bits (102), Expect = 4e-04
Identities = 63/244 (25%), Positives = 87/244 (35%), Gaps = 47/244 (19%)
Query: 9 KKKKDVSSPGGSGGKKNASQKRRS---------LRVHIPDLSSFAMPLLDGDLEGSGKHS 59
++ + SS GS + +RS R H P S+ P E S +
Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR-KRQKETSPRGR 545
Query: 60 SRKVDSPF--------GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQ 111
R+ SP P P + + P PR +P P R SP Y
Sbjct: 546 RRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYS 605
Query: 112 ESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRS------------RKTSGL 159
SPP P+R R++S P + SP R S S R++ L
Sbjct: 606 PSPP--PKR-------RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSL 656
Query: 160 SS---SPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDT--GQRFCPSSFQSP-- 212
SS S+P++ T++ P + +H P SSSPP G P QSP
Sbjct: 657 SSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSP 716
Query: 213 -TRP 215
TRP
Sbjct: 717 STRP 720
Score = 35.4 bits (80), Expect = 0.14
Identities = 47/166 (28%), Positives = 61/166 (36%), Gaps = 23/166 (13%)
Query: 81 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNP 140
P+ RPS P P+ P P+ SP R RR S S SSS SS + +P
Sbjct: 317 PRRRPSPRRRTP--PRRMPPPPR----HRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSP 370
Query: 141 ATSPGGIRFFSRSRKTSGLS------------SSPSTPTQVTKQHTFPLESYKHEPERLE 188
P R S RKT LS S P+TP T+ P +S + R+
Sbjct: 371 PKKPPK-RTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVS 429
Query: 189 NRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAA 230
+S T +R PS P + L+ K AA
Sbjct: 430 VSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAA 475
Score = 35.0 bits (79), Expect = 0.18
Identities = 42/163 (25%), Positives = 60/163 (36%), Gaps = 15/163 (9%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P P K S P P+ S P + ++SP + + S + SP R +
Sbjct: 617 PPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSP 676
Query: 129 SSSKESSPNSNP-----ATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHE 183
+K SP+ P ++SP +R G SSSP Q T P+
Sbjct: 677 QPNKRHSPSPRPRAPQTSSSPPPVR--------RGASSSPQR-RQSPSPSTRPIRRVSRT 727
Query: 184 PERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 226
PE + + AS SP +R S S + P A PS
Sbjct: 728 PEPKKIKKAASPSPQSV-RRVSSSRSVSGSPEPAAKKPPAPPS 769
Score = 30.0 bits (66), Expect = 5.9
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 21/156 (13%)
Query: 55 SGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESP 114
S SS + SP P P K S + R SP ++P R + P P T P +
Sbjct: 359 SSSSSSSRSRSP--PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT 416
Query: 115 PRSPRRMSFSGIF----RSSSK-------ESSPNSNPATSPGGIRFFSRSRKTSGLSSSP 163
P+ R S + R+S K E + +PA P + S S + G +
Sbjct: 417 PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE-LSESEEDKGGKMAA 475
Query: 164 STPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD 199
+ Q +Q Y+ + ++ + +SSS D
Sbjct: 476 ADSVQQRRQ-------YRRQNQQSSSDSGSSSSSED 504
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 43.1 bits (100), Expect = 7e-04
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 18/182 (9%)
Query: 58 HSSRKVD-SPFGPGSPSKGFFSRGPQPRPSSPMS-APVRP-KTSPGSPKTVFPFSYQESP 114
H SR ++ SP P P + S P+ P SP+ +P+ P + SP SP P S P
Sbjct: 484 HLSRPLEESPLSP-PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLS----P 538
Query: 115 PRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLS----SSPSTPTQVT 170
P P S F S P P + P S + S +S SP +P
Sbjct: 539 P--PEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Query: 171 KQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAA 230
+ P E P E+ + SPP R P SP PP P + +
Sbjct: 597 SRLFPPFEESPLSPPPEESPL----SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSR 652
Query: 231 LA 232
L+
Sbjct: 653 LS 654
Score = 39.3 bits (90), Expect = 0.010
Identities = 45/144 (31%), Positives = 57/144 (39%), Gaps = 17/144 (11%)
Query: 78 SRGPQPRPSSPMSAPVRPKTSPGSP----KTVFPFSYQESPPRSPRRMS-FSGIFRSSSK 132
SR P SPMS P P+ SP SP +FP ++ESP P S S +S
Sbjct: 570 SRLSPPPEESPMSPP--PEESPMSPPPEASRLFP-PFEESPLSPPPEESPLSPPPEASRL 626
Query: 133 ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIY 192
P +P + P S + S LS P V + + P E P E+
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPPEVSRLS-----PLPVVSRLSPPPEESPLSPPPEES--- 678
Query: 193 ASSSPPDTGQRFCPSSFQSPTRPP 216
+SPP R P SPT PP
Sbjct: 679 -PTSPPPEASRLSPPPEDSPTSPP 701
Score = 35.0 bits (79), Expect = 0.18
Identities = 48/172 (27%), Positives = 62/172 (36%), Gaps = 31/172 (18%)
Query: 64 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPV---RP-KTSPGSPKTVFPFSYQESPPRSPR 119
+SP P P S P+ P+SP+ + RP + SP SP P SPP P
Sbjct: 455 ESPTSP-PPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPP---PEESPLSPP--PE 508
Query: 120 RMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 179
FS + E SP S P SP S +P +P + P E
Sbjct: 509 SSPFSPL------EESPLSPPEESP-----------PSPALETPLSPPPEASPLSPPFEE 551
Query: 180 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAAL 231
P E +SPP R P +SP PP P +A+ L
Sbjct: 552 SPLSPPPEE----LPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRL 599
Score = 32.0 bits (71), Expect = 1.6
Identities = 48/197 (24%), Positives = 70/197 (35%), Gaps = 41/197 (20%)
Query: 71 SPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTV-FPFSYQESPPR---SPRRMSFSGI 126
SPS G G + + AP+ P+ S P++ QE PP +P S I
Sbjct: 2309 SPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDI 2368
Query: 127 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 186
FR S + P + P +P P + P + + P
Sbjct: 2369 FRPGS-YTDPYAQPPLTPRP-------------QPPPPESCCALPPRSLPSDPFSRVPAS 2414
Query: 187 LENRIYASSSP----PDTGQRFCPS----SFQSP---TRP-----------PLASPTHYA 224
+++ +S SP P + + FCPS FQSP +RP PL P
Sbjct: 2415 PQSQ-SSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQ 2473
Query: 225 PSKAAALAAALGPAEAG 241
P + A A +L G
Sbjct: 2474 PPEVAFKAGSLAHTSLG 2490
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.1 bits (100), Expect = 7e-04
Identities = 68/260 (26%), Positives = 94/260 (36%), Gaps = 30/260 (11%)
Query: 1 MGSAVMDTKKKKDVSSPGGSGGKKNASQKRRSLRVHIPDLSS-FAMPLLDGDLEGSGKHS 59
+ S D++ +S G+K SQ+ R P S + P +G GSG+ S
Sbjct: 265 LSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNG---GSGQRS 321
Query: 60 SRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPR 119
P SP S P+ R + +AP P SP P S S R R
Sbjct: 322 GAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPS---PRSAPSSQGRGGR 378
Query: 120 RMSFSG--------IFRSSSKESSP------NSNPATSPGGIRFFSRSRKTSGLSS---- 161
+G RS S S+P PA G R SR+R +S S
Sbjct: 379 AAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGA 438
Query: 162 -SPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCP---SSFQSPTRPPL 217
P + H + K P R S SP G+R P SS +SP P
Sbjct: 439 PGPGPEPGSERGHGGHGKRAKERPPR-ARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPR 497
Query: 218 ASPTHYAPSKAAALAAALGP 237
+ + +PSK+ + +A P
Sbjct: 498 SWSSSRSPSKSRSRSAEKRP 517
Score = 40.8 bits (94), Expect = 0.003
Identities = 59/229 (25%), Positives = 85/229 (37%), Gaps = 31/229 (13%)
Query: 18 GGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLE-------GSGKHSSR---KVDSPF 67
GG+G ++ ++RR R SS + P G GS + SR DS
Sbjct: 381 GGAGRRRRRRRRRRRSR------SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS 434
Query: 68 GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 127
G G+P GP P P S K + P P S SP RR G
Sbjct: 435 GRGAP-------GPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEG-- 485
Query: 128 RSSSKESSPNS---NPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEP 184
+SSS+ P+ + + SP R S ++ S SPS +++ + E
Sbjct: 486 KSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEA 545
Query: 185 ERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASP---THYAPSKAAA 230
E R + S P +R SF P R A +Y PS +++
Sbjct: 546 EATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSS 594
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 42.7 bits (99), Expect = 9e-04
Identities = 62/257 (24%), Positives = 98/257 (38%), Gaps = 34/257 (13%)
Query: 3 SAVMDTKKKKDVSSPGGSGGKKNASQ--KRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSS 60
+++ T + +SP G+ + + S SL +P S M + S
Sbjct: 272 ASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGM---------LSRTSL 322
Query: 61 RKVDSPFGPG-SPSKGFFSRGP-------QPRPSSPMSAPVRPKTSPGSPKT--VFPFSY 110
K+DS +P + +R P +P +SP P R + GSP T + S
Sbjct: 323 TKMDSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPT-GSPSTASLTGLSS 381
Query: 111 QESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVT 170
SP +P R S +G ++S P P SP G+ + K +S TP + +
Sbjct: 382 TASPTGTPPRASPTGTPSTASLTRKP---PRASPTGMLSRTSITKMDSTASPTRTPPRAS 438
Query: 171 KQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAA 230
T P S P R +SP T P+ S T P SP+ +P+ + +
Sbjct: 439 PTGTPPRASPTGTPSR--------ASPTGTQSTASPTGSPS-TASPTGSPSTASPTGSPS 489
Query: 231 LAAALGPAEAGMLEKLE 247
A+ L K+E
Sbjct: 490 RASLTRTPSRASLTKME 506
Score = 32.3 bits (72), Expect = 1.2
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 28/160 (17%)
Query: 70 GSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRS 129
GSPS+ +R P R S + T+P + S R+P + + + S
Sbjct: 540 GSPSRAALTRTPS-RASLTRTPSRASLTTPS----------RASLTRTPSTVLLTRMPPS 588
Query: 130 SSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 189
+S P+ TSP G+ + K +S TP + + T P S P R
Sbjct: 589 ASPTGMPSR---TSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPR--- 642
Query: 190 RIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
+SP T R P+ PP ASPT PS+A+
Sbjct: 643 -----ASPTGTPPRASPTG-----TPPRASPTG-TPSRAS 671
Score = 31.2 bits (69), Expect = 2.7
Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 83 PRPSSPMSAPVRPKTSP-GSPKTVFPFSYQE--SPPRSPRRMSFSGIFRSSSKESSPNSN 139
P +SP P P+ SP G+P P Q SP SP S +G ++S SP+
Sbjct: 434 PPRASPTGTP--PRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRA 491
Query: 140 PATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD 199
T ++ T+ ++ +PS + T P + A SP
Sbjct: 492 SLTRTPSRASLTKMESTASITRTPSRASPTWTPST-------ASPTGSPSTALAMGSPSR 544
Query: 200 TGQRFCPSSFQSPTRPPLASPTHYAPSKAA 229
PS P AS T PS+A+
Sbjct: 545 AALTRTPSRASLTRTPSRASLT--TPSRAS 572
Score = 30.8 bits (68), Expect = 3.5
Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 12/152 (7%)
Query: 72 PSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSY--QESPPRSPRRMSFSGIFRS 129
PS +R P +S + P R S +P T + + S R+P R S + +
Sbjct: 116 PSTASLTRSPSR--ASLTTTPSRASLSM-TPSTAAALTMPSRASLTRTPPRASLTMTPST 172
Query: 130 SSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 189
+S +P P SP G+ SR+ T S++ T T T L + P
Sbjct: 173 ASLTRTP---PRASPTGMP--SRTSPTGMPSTASLTKMDSTASITRTLS--RASPTGTPP 225
Query: 190 RIYASSSPPDTGQRFCPSSFQSPTRPPLASPT 221
R + SPP PS+ PP ASPT
Sbjct: 226 RASPTGSPPRASLSMMPSTALLIRTPPRASPT 257
Score = 30.0 bits (66), Expect = 5.9
Identities = 43/164 (26%), Positives = 58/164 (35%), Gaps = 14/164 (8%)
Query: 70 GSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPK-----TVFPFSYQESPPRSP--RRMS 122
G+PS+ S P +S M P R + P+ T S SP R+ R S
Sbjct: 24 GTPSRA--SLTGTPSTASLMGTPSRASLTGTPPRASLKGTTSMASLMVSPSRASLTRMQS 81
Query: 123 FSGIFRSSSKESSPNSNPATSPGGI---RFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 179
S + R+ S S P S R T+ L+ SPS + T L
Sbjct: 82 SSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRSPSRASLTTTPSRASLSM 141
Query: 180 YKHEPERLE--NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPT 221
L +R + +PP PS+ PP ASPT
Sbjct: 142 TPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPT 185
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 42.7 bits (99), Expect = 9e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 82 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 134
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 362 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 421
Query: 135 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 188
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 422 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 478
Query: 189 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 243
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 479 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 534
Query: 244 EKLEFEDEAVEDSE 257
++ ++EA++D+E
Sbjct: 535 PTVQIKEEALDDAE 548
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.7 bits (99), Expect = 9e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 82 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 134
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 916 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 135 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 188
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 976 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 189 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 243
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 1088
Query: 244 EKLEFEDEAVEDSE 257
++ ++EA++D+E
Sbjct: 1089 PTVQIKEEALDDAE 1102
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.7 bits (99), Expect = 9e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 82 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 134
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 916 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 135 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 188
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 976 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 189 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 243
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 1088
Query: 244 EKLEFEDEAVEDSE 257
++ ++EA++D+E
Sbjct: 1089 PTVQIKEEALDDAE 1102
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 42.0 bits (97), Expect = 0.002
Identities = 46/179 (25%), Positives = 65/179 (36%), Gaps = 12/179 (6%)
Query: 27 SQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPS 86
S +S+ H L+ A P G ++ SR+V S S G S P
Sbjct: 612 SPNSKSVPAHGTTLN--AQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSR 669
Query: 87 SPM----SAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPAT 142
P S +RPK S G+ S S +R + S + SS SS +S+ +
Sbjct: 670 KPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHSSSSSSSSSSSSH 729
Query: 143 SPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTG 201
S RK S P P+ VT H+ L ++ + R S P TG
Sbjct: 730 S------MESFRKNCVAHSGPPYPSTVTSSHSIGLNCVTNKANAVNVRHDQSGRGPPTG 782
Score = 33.1 bits (74), Expect = 0.70
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 81 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSP---- 136
P P +SP+S + +T+ P + SY + S + S S + +S P
Sbjct: 565 PVPSTTSPISTRIPHRTN-SVPTSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGT 623
Query: 137 --NSNPATSPGGIRFFS-RSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 189
N+ PA S S +SR+ S SSSPSTP+ ++ + P+ +P++L++
Sbjct: 624 TLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPM---SRKPQKLKS 676
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 42.0 bits (97), Expect = 0.002
Identities = 46/179 (25%), Positives = 65/179 (36%), Gaps = 12/179 (6%)
Query: 27 SQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPS 86
S +S+ H L+ A P G ++ SR+V S S G S P
Sbjct: 612 SPNSKSVPAHGTTLN--AQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSR 669
Query: 87 SPM----SAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPAT 142
P S +RPK S G+ S S +R + S + SS SS +S+ +
Sbjct: 670 KPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHSSSSSSSSSSSSH 729
Query: 143 SPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTG 201
S RK S P P+ VT H+ L ++ + R S P TG
Sbjct: 730 S------MESFRKNCVAHSGPPYPSTVTSSHSIGLNCVTNKANAVNVRHDQSGRGPPTG 782
Score = 33.1 bits (74), Expect = 0.70
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 81 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSP---- 136
P P +SP+S + +T+ P + SY + S + S S + +S P
Sbjct: 565 PVPSTTSPISTRIPHRTN-SVPTSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGT 623
Query: 137 --NSNPATSPGGIRFFS-RSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 189
N+ PA S S +SR+ S SSSPSTP+ ++ + P+ +P++L++
Sbjct: 624 TLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPM---SRKPQKLKS 676
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 71 SPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSS 130
+PS+G S+G + S+ ++P + TS GSP V P S R S + + S
Sbjct: 652 NPSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNP---------SQRSTSHANSSQGS 702
Query: 131 SKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENR 190
+ SP+ + + R T G+ + S+P H+FP P L +
Sbjct: 703 PSQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHSFP-PGATDGPLALPGQ 761
Query: 191 IYASSSPPDTGQRFCPSSFQSPTRPP 216
+ +S P S+ SPT P
Sbjct: 762 LQGNSIME-------PPSWPSPTEDP 780
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 41.2 bits (95), Expect = 0.003
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 81 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQES-PPRSPRRMSFSGIFRSSSKESSPNSN 139
P PRP P S P P+T+ S +V P E PP +P G+ S +K S +
Sbjct: 1283 PPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTP------GLCGSLAKSQSTETV 1336
Query: 140 PATSPGGIRFFSRSRKTSGLS-SSPSTP 166
PAT PGG S +SGLS SSP P
Sbjct: 1337 PAT-PGGEPPLSGG--SSGLSLSSPQVP 1361
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 0.003
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 19/196 (9%)
Query: 54 GSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQES 113
GS SS V + G S P P P S P S G+ + P +
Sbjct: 2471 GSQSLSSGAVATTTSSAGDHNGMLS---VPAPGVPHSDVGEPPASTGAQQ---PSALAAL 2524
Query: 114 PPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQH 173
P RR S S SSS SS +S+ ++S G S S + G SS P P K+
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSG----SSSSDSEG-SSLPVQPEVALKRV 2579
Query: 174 TFPLESYKH--------EPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP 225
P + K EP + + +SSS + SS S + +S + +
Sbjct: 2580 PSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Query: 226 SKAAALAAALGPAEAG 241
S +++ +++ PA+ G
Sbjct: 2640 SSSSSSSSSPSPAKPG 2655
Score = 40.4 bits (93), Expect = 0.004
Identities = 50/179 (27%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 46 PLLDGDLEGSGKHSSRKVDSPFG------PGSPSKGFFSR---GPQPRPSSPMS------ 90
P D D + K ++R SP P +P+ R PQP ++P+S
Sbjct: 334 PYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNP 393
Query: 91 ----APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGG 146
+P R ++ P SP+ + S ES P SP+ S +SS SP PA +PG
Sbjct: 394 PSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSR--HASSSPESP--KPAPAPGS 449
Query: 147 IRFFSRSRKTSGLSSSPSTPTQVTKQHTFPL--ESYKHEPERLENRIYASSSPPDTGQR 203
R S S+PT + H +S+ H P R R S P T +R
Sbjct: 450 HREIS------------SSPTSKNRSHGRAKRDKSHSHTPSRRMGR----SRSPATAKR 492
Score = 39.3 bits (90), Expect = 0.010
Identities = 58/197 (29%), Positives = 81/197 (41%), Gaps = 21/197 (10%)
Query: 23 KKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQ 82
K +AS + RS PD + L + S SS +VDS SP + P+
Sbjct: 1548 KPSASPQERSESDSSPDSKAKTRTPLR---QRSRSGSSPEVDSK-SRLSPRRSRSGSSPE 1603
Query: 83 PRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPAT 142
+ P +AP S SP+ P PR+ R S SG SSSK P+ ++
Sbjct: 1604 VK-DKPRAAPRAQSGSDSSPEPKAP------APRALPRRSRSG---SSSKGRGPSPEGSS 1653
Query: 143 SPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE-SYKHEPE-----RLENRIYASSS 196
S +T+ S S+P TK T P S + PE RL R ++SS
Sbjct: 1654 STESSPEHPPKSRTARRGSR-SSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASS 1712
Query: 197 PPDTGQRFCPSSFQSPT 213
P+T R P +SP+
Sbjct: 1713 SPETRSRTPPRHRRSPS 1729
Score = 38.9 bits (89), Expect = 0.013
Identities = 45/155 (29%), Positives = 60/155 (38%), Gaps = 11/155 (7%)
Query: 55 SGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTS---PGSPKTVFPFSYQ 111
S SS S S S S G S S PV+P+ + SP + +
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVR 2591
Query: 112 ESPPRSP------RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPST 165
E P P RR S S SSS SS +S+ ++S S S +S SSSPS
Sbjct: 2592 EGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS- 2650
Query: 166 PTQVTKQHTFPLESYKHEPERLENRIYASSSPPDT 200
P + Q P + +P E R + P D+
Sbjct: 2651 PAKPGPQ-ALPKPASPKKPPPGERRSRSPRKPIDS 2684
Score = 36.2 bits (82), Expect = 0.083
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 69 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 128
P +PS+G P P + P SP SP+ + +P+R R
Sbjct: 1470 PRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPEL-------NNKCLTPQRE------R 1516
Query: 129 SSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE 188
S S+ S A +P G R SRS + L PS Q + +S L
Sbjct: 1517 SGSESSVDQKTVARTPLGQR--SRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLR 1574
Query: 189 NRIYASSSPP-DTGQRFCPSSFQSPTRPPLASPTHYAP 225
R + SSP D+ R P +S + P + AP
Sbjct: 1575 QRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Score = 33.5 bits (75), Expect = 0.54
Identities = 42/136 (30%), Positives = 55/136 (40%), Gaps = 31/136 (22%)
Query: 70 GSPSKGFFSRGPQPRPSSPM-SAPVRPKTSP----GSPKTVFPFSYQESPPRSPRRMSFS 124
GS SKG RGP P SS S+P P S GS + P + +PPR
Sbjct: 1639 GSSSKG---RGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPR-------- 1687
Query: 125 GIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEP 184
R SS+ +SP R SR++ SSSP T ++ +H EP
Sbjct: 1688 ---RRSSR---------SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEP 1735
Query: 185 ---ERLENRIYASSSP 197
R R ++SSP
Sbjct: 1736 AEKSRSSRRRRSASSP 1751
Score = 32.7 bits (73), Expect = 0.92
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 12/141 (8%)
Query: 26 ASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQ--P 83
A +KRRS SS + S SS S S S GPQ P
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALP 2660
Query: 84 RPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATS 143
+P+SP P PG ++ P +S R R +S+S + R + SP +P
Sbjct: 2661 KPASPKKPP------PGERRSRSPRKPIDS-LRDSRSLSYSPVER---RRPSPQPSPRDQ 2710
Query: 144 PGGIRFFSRSRKTSGLSSSPS 164
R G S SPS
Sbjct: 2711 QSSSSERGSRRGQRGDSRSPS 2731
Score = 32.0 bits (71), Expect = 1.6
Identities = 40/147 (27%), Positives = 55/147 (37%), Gaps = 13/147 (8%)
Query: 42 SFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGS 101
S A P D S + + S P SP SR P SP AP +PGS
Sbjct: 395 SEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAP-----APGS 449
Query: 102 PKTV--FPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGL 159
+ + P S S R+ R S S + S+ + +PAT+ G SRSR +
Sbjct: 450 HREISSSPTSKNRSHGRAKRDKSHS---HTPSRRMGRSRSPATAKRG---RSRSRTPTKR 503
Query: 160 SSSPSTPTQVTKQHTFPLESYKHEPER 186
S S Q + + P+R
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQR 530
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.006
Identities = 66/274 (24%), Positives = 96/274 (35%), Gaps = 35/274 (12%)
Query: 3 SAVMDTKK------KKDVSSPGGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSG 56
SA D KK KD + K + K R S + L+ + S
Sbjct: 167 SAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPRKDSESKSSSKELEREQAKSS 226
Query: 57 KHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPR 116
K +SRK+ G G K + P+ P A K SPK P PP
Sbjct: 227 KDTSRKL----GEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPP----PPPPP 278
Query: 117 SPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSS----SPSTPTQVTKQ 172
PR S S K S+ ++S G S +TS SS P+ T+
Sbjct: 279 PPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRG 338
Query: 173 HTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALA 232
ES EP + + S + F S QS SP++ + S ++
Sbjct: 339 EKVKAES---EPREAKKALEVEESNSEDEASFKSESAQS-------SPSNSSSSSDSSSD 388
Query: 233 AALGPAE-------AGMLEKLEFEDEAVEDSESG 259
+ P++ M+E L+ E+ +DS SG
Sbjct: 389 SDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSG 422
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 40.0 bits (92), Expect = 0.006
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 76 FFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESS 135
+ SR PRPSSP+S P P + P+++ PRSPR S RS S+ S
Sbjct: 2 YMSRLSLPRPSSPLSWPPPPPRASSLPRSL---------PRSPRLCS-----RSRSRSRS 47
Query: 136 PNSNPATSPGGIRFFSRSRKTSGLSSSPSTPT 167
+ + S +R SRSR + SS PS P+
Sbjct: 48 RSRRRSRSLRWLRRRSRSR-SRPFSSGPSGPS 78
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,752,613
Number of Sequences: 37866
Number of extensions: 1298339
Number of successful extensions: 8550
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 7286
Number of HSP's gapped (non-prelim): 1306
length of query: 569
length of database: 18,247,518
effective HSP length: 108
effective length of query: 461
effective length of database: 14,157,990
effective search space: 6526833390
effective search space used: 6526833390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.