Guide to the Human Genome
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Name: PRKAG2 Sequence: fasta or formatted (569aa) NCBI GI: 33186925
Description:

AMP-activated protein kinase gamma2 subunit isoform a

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [328aa] AMP-activated protein kinase gamma2 subunit isoform b
alt prot [525aa] AMP-activated protein kinase gamma2 subunit isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         37           3
 C cysteine            0.5          3           1
 D aspartate           4.4         25           1
 E glutamate           5.8         33           2
 F phenylalanine       5.1         29           2
 G glycine             5.3         30           2
 H histidine           2.5         14           1
 I isoleucine          6.2         35           2
 K lysine              7.2         41           4
 L leucine             7.9         45           2
 M methionine          2.3         13           1
 N asparagine          3.0         17           2
 P proline             8.3         47           2
 Q glutamine           3.2         18           1
 R arginine            5.4         31           2
 S serine             12.0         68           3
 T threonine           5.1         29           2
 V valine              6.3         36           3
 W tryptophan          0.4          2           1
 Y tyrosine            2.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AMP-activated protein kinase gamma2 subunit isoform ... 
PRKAG2                0.923   AMP-activated protein kinase gamma2 subunit isoform...
PRKAG2                0.560   AMP-activated protein kinase gamma2 subunit isoform...
PRKAG1                0.406   AMP-activated protein kinase, noncatalytic gamma-1 su...
PRKAG3                0.358   AMP-activated protein kinase, non-catalytic gamma-3 ...
PRKAG1                0.313   AMP-activated protein kinase, noncatalytic gamma-1 s...
POLR2A                0.022   DNA-directed RNA polymerase II A 
ZNF469                0.020   zinc finger protein 469 
RICH2                 0.019   Rho GTPase-activating protein RICH2 
NACA                  0.018   nascent polypeptide-associated complex alpha subuni...
ZNF768                0.018   zinc finger protein 768 
CASKIN1               0.017   CASK interacting protein 1 
PRG4                  0.017   proteoglycan 4 isoform D 
PRG4                  0.017   proteoglycan 4 isoform C 
PRG4                  0.017   proteoglycan 4 isoform B 
PRG4                  0.017   proteoglycan 4 isoform A 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
MLL2                  0.016   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ37078              0.016   hypothetical protein LOC222183 
LOC100133756          0.016   PREDICTED: hypothetical protein, partial 
RERE                  0.016   atrophin-1 like protein isoform b 
RERE                  0.016   atrophin-1 like protein isoform a 
RERE                  0.016   atrophin-1 like protein isoform a 
ATXN7                 0.015   ataxin 7 isoform b 
ATXN7                 0.015   ataxin 7 isoform a 
UMODL1                0.015   uromodulin-like 1 isoform 2 precursor 
SETD1B                0.015   SET domain containing 1B 
SRRM2                 0.015   splicing coactivator subunit SRm300 
MLLT1                 0.014   myeloid/lymphoid or mixed-lineage leukemia (trithora...
LOC100293644          0.014   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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