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Search of human proteins with 33186901
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33186901 hypothetical protein LOC359845 [Homo sapiens]
(214 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33186901 hypothetical protein LOC359845 [Homo sapiens] 442 e-124
gi|116268099 hypothetical protein LOC144347 [Homo sapiens] 103 1e-22
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|13994190 frizzled 8 [Homo sapiens] 41 9e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 37 0.010
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 37 0.010
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 37 0.013
gi|13376611 zinc finger protein 703 [Homo sapiens] 36 0.028
gi|239754709 PREDICTED: hypothetical protein [Homo sapiens] 35 0.037
gi|239749260 PREDICTED: hypothetical protein [Homo sapiens] 35 0.037
gi|239743356 PREDICTED: hypothetical protein XP_002342826 [Homo ... 35 0.037
gi|239509045 PREDICTED: hypothetical protein [Homo sapiens] 35 0.037
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 35 0.048
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 35 0.048
gi|49087132 sal-like 2 [Homo sapiens] 35 0.048
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.062
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 35 0.062
gi|23821044 zinc finger/RING finger 2 [Homo sapiens] 35 0.062
gi|147902746 MEX3A protein [Homo sapiens] 35 0.062
gi|226498192 atonal homolog 8 [Homo sapiens] 34 0.081
gi|15029506 homeobox D8 [Homo sapiens] 34 0.081
gi|12707580 paired-like homeobox 2b [Homo sapiens] 34 0.081
gi|225690502 junctophilin 4 [Homo sapiens] 34 0.081
gi|225690500 junctophilin 4 [Homo sapiens] 34 0.081
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 34 0.081
gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens] 34 0.081
gi|117938759 GNAS complex locus XLas [Homo sapiens] 33 0.14
gi|239757383 PREDICTED: hypothetical protein XP_002345268 [Homo ... 33 0.14
>gi|33186901 hypothetical protein LOC359845 [Homo sapiens]
Length = 214
Score = 442 bits (1137), Expect = e-124
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MVGRLSLQDVPELVDAKKKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEP 60
MVGRLSLQDVPELVDAKKKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEP
Sbjct: 1 MVGRLSLQDVPELVDAKKKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEP 60
Query: 61 DAAAATPAAPSPASLPLAPGCALRLCPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFID 120
DAAAATPAAPSPASLPLAPGCALRLCPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFID
Sbjct: 61 DAAAATPAAPSPASLPLAPGCALRLCPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFID 120
Query: 121 DVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFEPRHRPTRFLSTTIVYPKYPKAVYTT 180
DVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFEPRHRPTRFLSTTIVYPKYPKAVYTT
Sbjct: 121 DVQLPLGLAVASCSQTVTCVPNGTWRNYKAEVRFEPRHRPTRFLSTTIVYPKYPKAVYTT 180
Query: 181 TLDYNCRKTLRRFLSSVELEAAELPGSDDLSDEC 214
TLDYNCRKTLRRFLSSVELEAAELPGSDDLSDEC
Sbjct: 181 TLDYNCRKTLRRFLSSVELEAAELPGSDDLSDEC 214
>gi|116268099 hypothetical protein LOC144347 [Homo sapiens]
Length = 135
Score = 103 bits (256), Expect = 1e-22
Identities = 50/122 (40%), Positives = 76/122 (62%)
Query: 84 RLCPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFIDDVQLPLGLAVASCSQTVTCVPNG 143
R+ P+ FGE ++ +P P E+R S VKY SE+HF D V V + S+T+ PN
Sbjct: 4 RMLPVFFGESIKVNPEPTHEIRCNSEVKYASEKHFQDKVFYAPVPTVTAYSETIVAAPNC 63
Query: 144 TWRNYKAEVRFEPRHRPTRFLSTTIVYPKYPKAVYTTTLDYNCRKTLRRFLSSVELEAAE 203
TWRNY++++ EPR R RF STTI++PK+ ++ + TTL + + R F +SV+L+ +
Sbjct: 64 TWRNYRSQLTLEPRPRALRFRSTTIIFPKHARSTFRTTLHCSLGRPSRWFTASVQLQLCQ 123
Query: 204 LP 205
P
Sbjct: 124 DP 125
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 43.5 bits (101), Expect = 1e-04
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 17/76 (22%)
Query: 21 DGVLDSPDSGLPPSPS--PSHWGLAA--------------GGGGGERAAA-PGTLEPDAA 63
DG+ +P + PP+P P+ L+A GGGGG+ A+ P L+P A
Sbjct: 46 DGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGA 105
Query: 64 AATPAAPSPASLPLAP 79
A PAAPSP LP P
Sbjct: 106 PAVPAAPSPGPLPARP 121
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 43.5 bits (101), Expect = 1e-04
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 17/76 (22%)
Query: 21 DGVLDSPDSGLPPSPS--PSHWGLAA--------------GGGGGERAAA-PGTLEPDAA 63
DG+ +P + PP+P P+ L+A GGGGG+ A+ P L+P A
Sbjct: 46 DGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGA 105
Query: 64 AATPAAPSPASLPLAP 79
A PAAPSP LP P
Sbjct: 106 PAVPAAPSPGPLPARP 121
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 43.5 bits (101), Expect = 1e-04
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 17/76 (22%)
Query: 21 DGVLDSPDSGLPPSPS--PSHWGLAA--------------GGGGGERAAA-PGTLEPDAA 63
DG+ +P + PP+P P+ L+A GGGGG+ A+ P L+P A
Sbjct: 46 DGIRPAPAAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGA 105
Query: 64 AATPAAPSPASLPLAP 79
A PAAPSP LP P
Sbjct: 106 PAVPAAPSPGPLPARP 121
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 40.8 bits (94), Expect = 9e-04
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 30 GLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALR 84
G PP P H G GGGGG+ AA P A P P + P PGC R
Sbjct: 183 GRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKARP--PGGGAAPCEPGCQCR 235
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 37.4 bits (85), Expect = 0.010
Identities = 31/73 (42%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 20 GDGVLDSPDSG-LPPSPSPSHWGLAAGGGGGERAAAPGT-------LEPDAAAATPAAPS 71
G L P S LP SPS S A G G R APGT P AAAA+ A P
Sbjct: 166 GSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPP 225
Query: 72 PASLPLAPGCALR 84
PA + AP A R
Sbjct: 226 PA-VAGAPAAAFR 237
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 37.4 bits (85), Expect = 0.010
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 29 SGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPA------SLPLAPGCA 82
SG PP P G G ++ PG P AA+ P PSP L + G A
Sbjct: 447 SGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQSPSEGLGMGAGPA 506
Query: 83 LRLCPLSFGEGVEF 96
L PL+ GE F
Sbjct: 507 CPLPPLAGGEAFPF 520
Score = 28.9 bits (63), Expect = 3.4
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 13/51 (25%)
Query: 32 PPSPSPSH--WGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPG 80
PPSP +H +G+ GGGG P+ P P P PLAPG
Sbjct: 551 PPSPLLNHSLFGVLTGGGGQP--------PPEPLLPPPGGPGP---PLAPG 590
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
[Homo sapiens]
Length = 1636
Score = 37.0 bits (84), Expect = 0.013
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 11 PELVDAKKKGDGVLDSPDS-GLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAA 69
P++V + D L S PPSP PS G G PGT P A
Sbjct: 750 PDMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGP--LPPGTYSGPTQLIQPRA 807
Query: 70 PSPASLPLAPGCALRLCP 87
P P ++P+APG AL P
Sbjct: 808 PGPHAMPVAPGPALYPAP 825
>gi|13376611 zinc finger protein 703 [Homo sapiens]
Length = 590
Score = 35.8 bits (81), Expect = 0.028
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 20 GDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAP 79
G G LD D PSP P+ + GGGGE PG + A+ P S +
Sbjct: 238 GGGELDKKDQEPKPSPEPA---AVSRGGGGE----PGAHGGAESGASGRKSEPPSALVGA 290
Query: 80 GCALRLCPLSFGEGVEFDPLPPKEVRY 106
G + P G V PLPP + Y
Sbjct: 291 GHVAPVSPYKPGHSV--FPLPPSSIGY 315
Score = 31.2 bits (69), Expect = 0.69
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 25 DSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALR 84
DSP P +P S G GGGG+R A P A + P A P L+
Sbjct: 3 DSPAGSNPRTPESSGSG---SGGGGKRPAVPA-----AVSLLPPADPLRQANRLPIRVLK 54
Query: 85 LCPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFIDDVQLPLGLAVASCSQ 135
+ G + + L P S ++ D+++ PL L +CSQ
Sbjct: 55 MLSAHTGHLLHPEYLQPLSSTPVSPIELDAKKS-------PLALLAQTCSQ 98
>gi|239754709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 35.4 bits (80), Expect = 0.037
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 28/92 (30%)
Query: 24 LDSPDSGLPPSPSPSHWGLA-------------------AGGG---------GGERAAAP 55
L S GL P PS +HW A AG G G +++P
Sbjct: 5 LPSRAQGLLPEPSSAHWRAAVERVLAQRRQLGSGPRWAPAGPGPPSLTVQDPGRGHSSSP 64
Query: 56 GTLEPDAAAATPAAPSPASLPLAPGCALRLCP 87
L PDA P PSP S P+ LR P
Sbjct: 65 DALLPDARCPCPGVPSPGSQPVLLSLPLRRSP 96
>gi|239749260 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 35.4 bits (80), Expect = 0.037
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 28/92 (30%)
Query: 24 LDSPDSGLPPSPSPSHWGLA-------------------AGGG---------GGERAAAP 55
L S GL P PS +HW A AG G G +++P
Sbjct: 5 LPSRAQGLLPEPSSAHWRAAVERVLAQRRQLGSGPRWAPAGPGPPSLTVQDPGRGHSSSP 64
Query: 56 GTLEPDAAAATPAAPSPASLPLAPGCALRLCP 87
L PDA P PSP S P+ LR P
Sbjct: 65 DALLPDARCPCPGVPSPGSQPVLLSLPLRRSP 96
>gi|239743356 PREDICTED: hypothetical protein XP_002342826 [Homo
sapiens]
Length = 112
Score = 35.4 bits (80), Expect = 0.037
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 28/92 (30%)
Query: 24 LDSPDSGLPPSPSPSHWGLA-------------------AGGG---------GGERAAAP 55
L S GL P PS +HW A AG G G +++P
Sbjct: 5 LPSRAQGLLPEPSSAHWRAAVERVLAQRRQLGSGPRWAPAGPGPPSLTVQDPGRGHSSSP 64
Query: 56 GTLEPDAAAATPAAPSPASLPLAPGCALRLCP 87
L PDA P PSP S P+ LR P
Sbjct: 65 DALLPDARCPCPGVPSPGSQPVLLSLPLRRSP 96
>gi|239509045 PREDICTED: hypothetical protein [Homo sapiens]
Length = 112
Score = 35.4 bits (80), Expect = 0.037
Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 28/92 (30%)
Query: 24 LDSPDSGLPPSPSPSHWGLA-------------------AGGG---------GGERAAAP 55
L S GL P PS +HW A AG G G +++P
Sbjct: 5 LPSRAQGLLPEPSSAHWRAAVERVLAQRRQLGSGPRWAPAGPGPPSLTVQDPGRGHSSSP 64
Query: 56 GTLEPDAAAATPAAPSPASLPLAPGCALRLCP 87
L PDA P PSP S P+ LR P
Sbjct: 65 DALLPDARCPCPGVPSPGSQPVLLSLPLRRSP 96
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 35.0 bits (79), Expect = 0.048
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 18 KKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERA------AAP-----GTLEPDAAAAT 66
+KG G LPP P P G GGGGG RA A P L + A
Sbjct: 335 RKGQGTRLGAPHSLPPPP-PFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQRSGAR 393
Query: 67 PAAPSPASLPLAPGCAL 83
P AP+P LP P A+
Sbjct: 394 PGAPAP-PLPCLPPAAV 409
>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
sapiens]
Length = 492
Score = 35.0 bits (79), Expect = 0.048
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 18 KKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGERA------AAP-----GTLEPDAAAAT 66
+KG G LPP P P G GGGGG RA A P L + A
Sbjct: 335 RKGQGTRLGAPHSLPPPP-PFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQRSGAR 393
Query: 67 PAAPSPASLPLAPGCAL 83
P AP+P LP P A+
Sbjct: 394 PGAPAP-PLPCLPPAAV 409
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 35.0 bits (79), Expect = 0.048
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 11 PELVDAKKKGDGVLDSPDSG--LPPSP----------SPSHW-----GLAAGGGGGERAA 53
P+++D + + PDSG +P P SP H+ G AAGGGGG A
Sbjct: 89 PQVMDTEHS-----NPPDSGSSVPTDPTWGPERRGEESPGHFLVAATGTAAGGGGGLILA 143
Query: 54 APGT-LEPDAAAATPAAPSPASLPLAPG 80
+P P +TPA P P P PG
Sbjct: 144 SPKLGATPLPPESTPAPPPPPPPPPPPG 171
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.7 bits (78), Expect = 0.062
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 27 PDSGLPPSPSPS--HWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALR 84
P +G PP P P GL A AAAP T+ ATP AP+P++ A +
Sbjct: 279 PAAGGPPQPGPHLPPLGLPAPAASAATAAAPSTVS-SGPPATPVAPAPSADGSAAPAGVG 337
Query: 85 LCPLSFGEG 93
+ P + G G
Sbjct: 338 VPPPATGGG 346
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.7 bits (78), Expect = 0.062
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 27 PDSGLPPSPSPS--HWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALR 84
P +G PP P P GL A AAAP T+ ATP AP+P++ A +
Sbjct: 279 PAAGGPPQPGPHLPPLGLPAPAASAATAAAPSTVS-SGPPATPVAPAPSADGSAAPAGVG 337
Query: 85 LCPLSFGEG 93
+ P + G G
Sbjct: 338 VPPPATGGG 346
>gi|23821044 zinc finger/RING finger 2 [Homo sapiens]
Length = 242
Score = 34.7 bits (78), Expect = 0.062
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 29 SGLPPSPSPSHWGLAAGGGGGERAAA-------PGTLEPDAAAATPAAPSPASLPLAP 79
S LP S S G A GGGG AAA P +P A+ AA + + P AP
Sbjct: 21 SDLPSSSSGGANGTAGGGGGARAAAAGRFPAQVPSAHQPSASGGAAAAAAAPAAPAAP 78
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 34.7 bits (78), Expect = 0.062
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 30 GLPPSPSPSHWGLAAGGGGG---ERAAAPGTLEPDAAAATPAAPSPASLPLAP 79
G PP+P+ G GGGGG + AA P P AA PAAP+ A P
Sbjct: 51 GEPPAPTAGEDG--GGGGGGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTP 101
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 34.3 bits (77), Expect = 0.081
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 11 PELVDAKKKGDGVLDSPDSGLP---PSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATP 67
PE+ DA+K+ L + GLP P P P+ A GG + PG A P
Sbjct: 102 PEVSDARKRCFA-LGAVGPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPP 160
Query: 68 AAPSPASLPLAP 79
A P+P++ P P
Sbjct: 161 ARPAPSAPPAPP 172
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 34.3 bits (77), Expect = 0.081
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 33 PSPSPSHWGLAAGGGGGERAAAPGTLEPDAA--AATPAAPSPASLPLAPGCALRLCPLSF 90
PSP PS G G G+ PG P AA AA P P P P P C C
Sbjct: 74 PSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPPCGGIAC---H 130
Query: 91 GEGVEF 96
GE +F
Sbjct: 131 GEPAKF 136
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 34.3 bits (77), Expect = 0.081
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 17/73 (23%)
Query: 27 PDS----GLPPSPSPSHWGLAAGGGGGERAAAPGTLEPD-------------AAAATPAA 69
PDS G P+P+PS GGGG A APG P AAAA AA
Sbjct: 192 PDSTGGPGPNPNPTPSCGANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAA 251
Query: 70 PSPASLPLAPGCA 82
+ A+ A G A
Sbjct: 252 AAAAAAAAAGGLA 264
>gi|225690502 junctophilin 4 [Homo sapiens]
Length = 628
Score = 34.3 bits (77), Expect = 0.081
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 27 PDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALRLC 86
P P SP W GG G + G D A P S PL GC+
Sbjct: 482 PGGDQGPFSSPKAWPEEWGGAGAQAEELAGYEAEDEAGMQGPGPRDGS-PLLGGCSDSSG 540
Query: 87 PLSFGEGVEFDPLPP 101
L EG + +PLPP
Sbjct: 541 SLREEEGEDEEPLPP 555
>gi|225690500 junctophilin 4 [Homo sapiens]
Length = 628
Score = 34.3 bits (77), Expect = 0.081
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 27 PDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAPGCALRLC 86
P P SP W GG G + G D A P S PL GC+
Sbjct: 482 PGGDQGPFSSPKAWPEEWGGAGAQAEELAGYEAEDEAGMQGPGPRDGS-PLLGGCSDSSG 540
Query: 87 PLSFGEGVEFDPLPP 101
L EG + +PLPP
Sbjct: 541 SLREEEGEDEEPLPP 555
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 34.3 bits (77), Expect = 0.081
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 29 SGLPPSPSPSHWGLAAGGGGGERAAAPG--TLEPDAAAATPAAPS 71
S P +PSPSH G A GGGG + A L P AA+A P+
Sbjct: 1056 SPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPA 1100
Score = 29.6 bits (65), Expect = 2.0
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 26 SPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAP 79
S ++ P P P+ GGGGG + +P A + P +PSP P +P
Sbjct: 1176 STEAEPPTQPEPT-----GGGGGGGSSPSPA----PAMSPVPPSPSPVPTPASP 1220
Score = 28.1 bits (61), Expect = 5.8
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 12 ELVDAKKKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGER---AAAPGTLEPDAA----- 63
E VD++ D L++ S S + G +AGGGGG A+ P L+ A
Sbjct: 1676 EEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYLDGQ 1735
Query: 64 ----AATPAAPSPASL 75
++TP P P L
Sbjct: 1736 AFGGSSTPGPPYPPQL 1751
>gi|28376656 zinc finger, X-linked, duplicated B [Homo sapiens]
Length = 803
Score = 34.3 bits (77), Expect = 0.081
Identities = 38/123 (30%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 28 DSGLPPSPSPSHWGLAAGGGGGERAAAPGT---LEPDAAAATPAAPSPASLP--LAPGCA 82
+ G P+ P L A G AA PG L PD A PA P+PA P A G A
Sbjct: 196 EPGAAPAQQPGC--LIAPQAGFPHAAHPGDCPELPPDLLLAEPAEPAPAPAPEEEAEGPA 253
Query: 83 LRL---CPLSFGEGVEFDPLPPKEVRYTSLVKYDSERHFI----DDVQLPLGLAVASCSQ 135
L PL G GV P + T K+ + H + Q P + C
Sbjct: 254 AALGPRGPLGSGPGVVLYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLGGCGW 313
Query: 136 TVT 138
T T
Sbjct: 314 TFT 316
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 33.5 bits (75), Expect = 0.14
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 25 DSPDSGLPPSPSPSHWGLAAGGGGGERAAAPGTLEPDAAAATPAAPSPASLPLAP 79
+ PDSG P+ P AA G AAP + AA PA P + P AP
Sbjct: 409 EDPDSGTAPA-DPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAP 462
Score = 31.2 bits (69), Expect = 0.69
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 27 PDSGLPP-SPSPSHWGLAA-------GGGGGERAAAPGTLEPDAAAATPAAPSPASLPLA 78
PDSG P +P+ G A G E AAP E AA PAAP A P A
Sbjct: 441 PDSGAAPDAPADPDSGAAPDAPADPDAGAAPEAPAAPAAAETRAAHVAPAAPD-AGAPTA 499
Query: 79 PGCA 82
P +
Sbjct: 500 PAAS 503
Score = 30.4 bits (67), Expect = 1.2
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 11 PELVDAKKKGDGVLDSPDSGLPPSPSPSHWGLAAGGGGGE---RAAAPGTLEPDAAAATP 67
P + + + +G D+ + G PSP + AAG + RAA +PD + ATP
Sbjct: 352 PPVEEEAAEMEGAADAAEGG--KVPSPGYGSPAAGAASADTAARAAPAAPADPD-SGATP 408
Query: 68 AAPSPASLPLAP 79
P + P P
Sbjct: 409 EDPDSGTAPADP 420
>gi|239757383 PREDICTED: hypothetical protein XP_002345268 [Homo
sapiens]
Length = 247
Score = 33.5 bits (75), Expect = 0.14
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 27 PDSGLPPSPSPSHW-GLAAGGGGGERAAAPGTLEPDAA--AATPAA 69
P G P PS W G A GGGE+ PGT+ P A TP+A
Sbjct: 106 PAPGASARPPPSDWVGKAGSKGGGEQCRYPGTVVPIPALVRVTPSA 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,326,228
Number of Sequences: 37866
Number of extensions: 607438
Number of successful extensions: 4902
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 4189
Number of HSP's gapped (non-prelim): 930
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.