Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 32469495
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32469495 potassium channel, subfamily K, member 18 [Homo
sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32469495 potassium channel, subfamily K, member 18 [Homo sapi... 786 0.0
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 76 6e-14
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 76 6e-14
gi|10863961 potassium channel, subfamily K, member 10 isoform 1 ... 76 6e-14
gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens] 74 2e-13
gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens] 72 1e-12
gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens] 67 2e-11
gi|14589851 potassium channel, subfamily K, member 2 isoform b [... 67 3e-11
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 67 3e-11
gi|62912487 potassium channel, subfamily K, member 2 isoform a [... 67 3e-11
gi|205360983 potassium channel, subfamily K, member 16 isoform 3... 63 4e-10
gi|205360973 potassium channel, subfamily K, member 16 isoform 4... 63 4e-10
gi|205360971 potassium channel, subfamily K, member 16 isoform 1... 63 4e-10
gi|14149764 potassium channel, subfamily K, member 16 isoform 2 ... 63 4e-10
gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens] 60 3e-09
gi|15718767 TRAAK [Homo sapiens] 58 1e-08
gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens] 58 1e-08
gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens] 52 1e-06
gi|205361107 potassium channel, subfamily K, member 17 isoform 2... 49 8e-06
gi|17025230 potassium channel, subfamily K, member 17 isoform 1 ... 49 8e-06
gi|5031821 potassium channel, subfamily K, member 7 isoform C [H... 47 2e-05
gi|16118231 potassium channel, subfamily K, member 7 isoform A [... 47 2e-05
gi|16118235 potassium channel, subfamily K, member 7 isoform B [... 47 2e-05
gi|16118233 potassium channel, subfamily K, member 7 isoform B [... 47 2e-05
gi|16306555 potassium channel, subfamily K, member 13 [Homo sapi... 46 5e-05
gi|11545761 potassium channel, subfamily K, member 12 [Homo sapi... 40 0.003
gi|19424136 potassium channel, subfamily V, member 2 [Homo sapiens] 38 0.013
gi|88758576 Shaw-related voltage-gated potassium channel protein... 37 0.030
gi|24497462 Shaw-related voltage-gated potassium channel protein... 37 0.030
gi|41349443 potassium channel, subfamily T, member 2 [Homo sapiens] 37 0.039
>gi|32469495 potassium channel, subfamily K, member 18 [Homo
sapiens]
Length = 384
Score = 786 bits (2031), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MEVSGHPQARRCCPEALGKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK 60
MEVSGHPQARRCCPEALGKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK
Sbjct: 1 MEVSGHPQARRCCPEALGKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK 60
Query: 61 FLEELCRILNCSETVVEDRKQDLQGHLQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYG 120
FLEELCRILNCSETVVEDRKQDLQGHLQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYG
Sbjct: 61 FLEELCRILNCSETVVEDRKQDLQGHLQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYG 120
Query: 121 YIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNRFRKFPFFTRPLLSKW 180
YIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNRFRKFPFFTRPLLSKW
Sbjct: 121 YIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNRFRKFPFFTRPLLSKW 180
Query: 181 CPKSLFKKKPDPKPADEAVPQIIISAEELPGPKLGTCPSRPSCSMELFERSHALEKQNTL 240
CPKSLFKKKPDPKPADEAVPQIIISAEELPGPKLGTCPSRPSCSMELFERSHALEKQNTL
Sbjct: 181 CPKSLFKKKPDPKPADEAVPQIIISAEELPGPKLGTCPSRPSCSMELFERSHALEKQNTL 240
Query: 241 QLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCAAAI 300
QLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCAAAI
Sbjct: 241 QLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCAAAI 300
Query: 301 LPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQN 360
LPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQN
Sbjct: 301 LPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQN 360
Query: 361 RLIDIYKNVMLFFAKGKFYHLVKK 384
RLIDIYKNVMLFFAKGKFYHLVKK
Sbjct: 361 RLIDIYKNVMLFFAKGKFYHLVKK 384
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 75.9 bits (185), Expect = 6e-14
Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 30 LVTYALVGAVVFSAIEDG-----QVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDLQ 84
+V Y + G +VF A+E + +A + EF + + +C ET+++ L
Sbjct: 84 VVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLR--DHVCVSPQELETLIQHA---LD 138
Query: 85 GHLQKVKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIP 142
V P N ++HW S+ FF TV +T+GYG I P T GK C+LYA+FGIP
Sbjct: 139 ADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIP 198
Query: 143 LMFLVLTDTGDILATILSTSYNRFRK 168
L +L GD L TI S R K
Sbjct: 199 LFGFLLAGIGDQLGTIFGKSIARVEK 224
Score = 34.3 bits (77), Expect = 0.19
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 258 LGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCA------AAILPFWETQLDFE 311
LG + I+ +++V ++ + + +I+ I+F C A I + E E
Sbjct: 211 LGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALE 270
Query: 312 NAFYFCFVTLTTIGFGDTV 330
+ YF VTLTT+GFGD V
Sbjct: 271 S-IYFVVVTLTTVGFGDFV 288
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 309 DFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEI 350
D +AF+F +TTIG+G+ +F +Y I G+ +
Sbjct: 158 DLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPL 199
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 75.9 bits (185), Expect = 6e-14
Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 30 LVTYALVGAVVFSAIEDG-----QVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDLQ 84
+V Y + G +VF A+E + +A + EF + + +C ET+++ L
Sbjct: 84 VVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLR--DHVCVSPQELETLIQHA---LD 138
Query: 85 GHLQKVKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIP 142
V P N ++HW S+ FF TV +T+GYG I P T GK C+LYA+FGIP
Sbjct: 139 ADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIP 198
Query: 143 LMFLVLTDTGDILATILSTSYNRFRK 168
L +L GD L TI S R K
Sbjct: 199 LFGFLLAGIGDQLGTIFGKSIARVEK 224
Score = 34.3 bits (77), Expect = 0.19
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 258 LGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCA------AAILPFWETQLDFE 311
LG + I+ +++V ++ + + +I+ I+F C A I + E E
Sbjct: 211 LGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALE 270
Query: 312 NAFYFCFVTLTTIGFGDTV 330
+ YF VTLTT+GFGD V
Sbjct: 271 S-IYFVVVTLTTVGFGDFV 288
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 309 DFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEI 350
D +AF+F +TTIG+G+ +F +Y I G+ +
Sbjct: 158 DLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPL 199
>gi|10863961 potassium channel, subfamily K, member 10 isoform 1
[Homo sapiens]
Length = 538
Score = 75.9 bits (185), Expect = 6e-14
Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 30 LVTYALVGAVVFSAIEDG-----QVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDLQ 84
+V Y + G +VF A+E + +A + EF + + +C ET+++ L
Sbjct: 79 VVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLR--DHVCVSPQELETLIQHA---LD 133
Query: 85 GHLQKVKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIP 142
V P N ++HW S+ FF TV +T+GYG I P T GK C+LYA+FGIP
Sbjct: 134 ADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIP 193
Query: 143 LMFLVLTDTGDILATILSTSYNRFRK 168
L +L GD L TI S R K
Sbjct: 194 LFGFLLAGIGDQLGTIFGKSIARVEK 219
Score = 34.3 bits (77), Expect = 0.19
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 258 LGRLSYSIISNLDEVGQQVERLDIPLPIIALIVFAYISCA------AAILPFWETQLDFE 311
LG + I+ +++V ++ + + +I+ I+F C A I + E E
Sbjct: 206 LGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALE 265
Query: 312 NAFYFCFVTLTTIGFGDTV 330
+ YF VTLTT+GFGD V
Sbjct: 266 S-IYFVVVTLTTVGFGDFV 283
Score = 28.9 bits (63), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 309 DFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEI 350
D +AF+F +TTIG+G+ +F +Y I G+ +
Sbjct: 153 DLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPL 194
>gi|4504849 potassium channel, subfamily K, member 3 [Homo sapiens]
Length = 394
Score = 74.3 bits (181), Expect = 2e-13
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 24 LCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDL 83
L + TY LVGA VF A+E L+ E + +EL N S+ E+ L
Sbjct: 9 LALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQ--QELRARYNLSQGGYEE----L 62
Query: 84 QGHLQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPL 143
+ + ++KP W F S +F TV +T+GYG+ P T GK CM YAL GIPL
Sbjct: 63 ERVVLRLKPH--KAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPL 120
Query: 144 MFLVLTDTGDILATILSTSYNRFRK 168
++ G+ + T++ +R +K
Sbjct: 121 TLVMFQSLGERINTLVRYLLHRAKK 145
Score = 48.5 bits (114), Expect = 1e-05
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 273 GQQVERLDIPLPIIALIVF----AYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGD 328
G + R D+ + + LI F + + AA +E F+ A+Y+CF+TLTTIGFGD
Sbjct: 146 GLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQ-AYYYCFITLTTIGFGD 204
Query: 329 TVL--------EHPNFFLFFSIYIIVGMEIVFIAFKLVQNRLI 363
V P + F +YI+ G+ ++ LV R +
Sbjct: 205 YVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNLVVLRFM 247
Score = 35.4 bits (80), Expect = 0.087
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 307 QLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQNRLIDIY 366
Q F +FYF +TTIG+G +F Y ++G+ + + F+ + R+ +
Sbjct: 77 QWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLV 136
Query: 367 KNVMLFFAKG 376
+ ++ KG
Sbjct: 137 RYLLHRAKKG 146
Score = 30.0 bits (66), Expect = 3.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 95 FNRTTHWSFLSSLFFCCTVFSTVGYG 120
F+ HW+F + ++C +T+G+G
Sbjct: 178 FSHYEHWTFFQAYYYCFITLTTIGFG 203
>gi|7706135 potassium channel, subfamily K, member 9 [Homo sapiens]
Length = 374
Score = 71.6 bits (174), Expect = 1e-12
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 32 TYALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDLQGHLQKVK 91
TY LVGA VF A+E + E EK E RI ED +Q L+ + + +
Sbjct: 17 TYLLVGAAVFDALESDHEM-----REEEKLKAEEIRIKGKYNISSEDYRQ-LELVILQSE 70
Query: 92 PQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDT 151
P W F S +F TV +T+GYG+ P T GK CM YA+ GIPL ++
Sbjct: 71 PH--RAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSL 128
Query: 152 GDILATILSTSYNRFRK 168
G+ + T + R +K
Sbjct: 129 GERMNTFVRYLLKRIKK 145
Score = 47.0 bits (110), Expect = 3e-05
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 310 FENAFYFCFVTLTTIGFGDTVL--------EHPNFFLFFSIYIIVGMEIVFIAFKLVQNR 361
F +A+Y+CF+TLTTIGFGD V + P + F +YI+VG+ ++ LV R
Sbjct: 186 FFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLR 245
Query: 362 LI 363
+
Sbjct: 246 FL 247
Score = 33.1 bits (74), Expect = 0.43
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 307 QLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQNRL 362
Q F +FYF +TTIG+G F Y ++G+ + + F+ + R+
Sbjct: 77 QWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERM 132
Score = 32.3 bits (72), Expect = 0.74
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 95 FNRTTHWSFLSSLFFCCTVFSTVGYG-YIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGD 153
F++ WSF + ++C +T+G+G Y+ T+ LY F + + LT G
Sbjct: 178 FSQCEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGA 237
Query: 154 ILATIL 159
L ++
Sbjct: 238 FLNLVV 243
>gi|11641275 potassium family, subfamily K, member 15 [Homo sapiens]
Length = 330
Score = 67.4 bits (163), Expect = 2e-11
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 24 LCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDL 83
LC LC+L LVGA VF A+E A+ G +++ + ED ++ L
Sbjct: 13 LCTLCYL----LVGAAVFDALES-----EAESGRQRLLVQKRGALRRKFGFSAEDYRE-L 62
Query: 84 QGHLQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPL 143
+ + +P R W F S +F TV +T+GYG+ P T GK CM YAL GIPL
Sbjct: 63 ERLALQAEPHRAGR--QWKFPGSFYFAITVITTIGYGHAAPGTDSGKVFCMFYALLGIPL 120
Query: 144 MFLVLTDTGDILATIL 159
+ G+ L ++
Sbjct: 121 TLVTFQSLGERLNAVV 136
Score = 45.1 bits (105), Expect = 1e-04
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 288 LIVFAYISCAAAILPFWETQLDFE-----NAFYFCFVTLTTIGFGDTV-------LEHPN 335
L+V ++CAA + FE +A+Y+CF+TLTTIGFGD V L+
Sbjct: 159 LVVAGLLACAATLALGAVAFSHFEGWTFFHAYYYCFITLTTIGFGDFVALQSGEALQRKL 218
Query: 336 FFLFFS-IYIIVGMEIVFIAFKLVQNRLI 363
++ FS +YI++G+ ++ LV R +
Sbjct: 219 PYVAFSFLYILLGLTVIGAFLNLVVLRFL 247
Score = 38.1 bits (87), Expect = 0.013
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 307 QLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQNRLIDIY 366
Q F +FYF +TTIG+G + +F Y ++G+ + + F+ + RL +
Sbjct: 77 QWKFPGSFYFAITVITTIGYGHAAPGTDSGKVFCMFYALLGIPLTLVTFQSLGERLNAVV 136
Query: 367 KNVML 371
+ ++L
Sbjct: 137 RRLLL 141
>gi|14589851 potassium channel, subfamily K, member 2 isoform b
[Homo sapiens]
Length = 411
Score = 67.0 bits (162), Expect = 3e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 30 LVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETVVEDRKQDLQGHL 87
+V Y ++GA VF A+E + +K F+ + + + T +++ Q + +
Sbjct: 54 VVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCV---NSTELDELIQQIVAAI 110
Query: 88 QK-VKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLM 144
+ P N+ +HW SS FF TV +T+G+G I P T GK C++YAL GIPL
Sbjct: 111 NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLF 170
Query: 145 FLVLTDTGDILATI 158
+L GD L TI
Sbjct: 171 GFLLAGVGDQLGTI 184
Score = 32.7 bits (73), Expect = 0.56
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 31/127 (24%)
Query: 229 ERSHALEKQNTLQLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIAL 288
E+ H + ++ T+ + Q +SC + LDE+ QQ I+A
Sbjct: 69 EQPHEISQRTTIVIQKQTFISQHSCVNS----------TELDELIQQ---------IVAA 109
Query: 289 IVFAYISCAAAILPFWETQ-----LDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIY 343
I A I+P T D ++F+F +TTIGFG+ +F IY
Sbjct: 110 I-------NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 162
Query: 344 IIVGMEI 350
++G+ +
Sbjct: 163 ALLGIPL 169
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Query: 312 NAFYFCFVTLTTIGFGDTV-----LEHPNFFL-FFSIYIIVGM 348
+A YF +TLTTIGFGD V +E+ +F+ +I+VG+
Sbjct: 240 DAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVWFWILVGL 282
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 67.0 bits (162), Expect = 3e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 30 LVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETVVEDRKQDLQGHL 87
+V Y ++GA VF A+E + +K F+ + + + T +++ Q + +
Sbjct: 69 VVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCV---NSTELDELIQQIVAAI 125
Query: 88 QK-VKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLM 144
+ P N+ +HW SS FF TV +T+G+G I P T GK C++YAL GIPL
Sbjct: 126 NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLF 185
Query: 145 FLVLTDTGDILATI 158
+L GD L TI
Sbjct: 186 GFLLAGVGDQLGTI 199
Score = 32.7 bits (73), Expect = 0.56
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 31/127 (24%)
Query: 229 ERSHALEKQNTLQLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIAL 288
E+ H + ++ T+ + Q +SC + LDE+ QQ I+A
Sbjct: 84 EQPHEISQRTTIVIQKQTFISQHSCVNS----------TELDELIQQ---------IVAA 124
Query: 289 IVFAYISCAAAILPFWETQ-----LDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIY 343
I A I+P T D ++F+F +TTIGFG+ +F IY
Sbjct: 125 I-------NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 177
Query: 344 IIVGMEI 350
++G+ +
Sbjct: 178 ALLGIPL 184
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Query: 312 NAFYFCFVTLTTIGFGDTV-----LEHPNFFL-FFSIYIIVGM 348
+A YF +TLTTIGFGD V +E+ +F+ +I+VG+
Sbjct: 255 DAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVWFWILVGL 297
>gi|62912487 potassium channel, subfamily K, member 2 isoform a
[Homo sapiens]
Length = 422
Score = 67.0 bits (162), Expect = 3e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 30 LVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETVVEDRKQDLQGHL 87
+V Y ++GA VF A+E + +K F+ + + + T +++ Q + +
Sbjct: 65 VVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCV---NSTELDELIQQIVAAI 121
Query: 88 QK-VKP--QWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLM 144
+ P N+ +HW SS FF TV +T+G+G I P T GK C++YAL GIPL
Sbjct: 122 NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLF 181
Query: 145 FLVLTDTGDILATI 158
+L GD L TI
Sbjct: 182 GFLLAGVGDQLGTI 195
Score = 32.7 bits (73), Expect = 0.56
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 31/127 (24%)
Query: 229 ERSHALEKQNTLQLPPQAMERSNSCPELVLGRLSYSIISNLDEVGQQVERLDIPLPIIAL 288
E+ H + ++ T+ + Q +SC + LDE+ QQ I+A
Sbjct: 80 EQPHEISQRTTIVIQKQTFISQHSCVNS----------TELDELIQQ---------IVAA 120
Query: 289 IVFAYISCAAAILPFWETQ-----LDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIY 343
I A I+P T D ++F+F +TTIGFG+ +F IY
Sbjct: 121 I-------NAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGKIFCIIY 173
Query: 344 IIVGMEI 350
++G+ +
Sbjct: 174 ALLGIPL 180
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Query: 312 NAFYFCFVTLTTIGFGDTV-----LEHPNFFL-FFSIYIIVGM 348
+A YF +TLTTIGFGD V +E+ +F+ +I+VG+
Sbjct: 251 DAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVWFWILVGL 293
>gi|205360983 potassium channel, subfamily K, member 16 isoform 3
[Homo sapiens]
Length = 294
Score = 63.2 bits (152), Expect = 4e-10
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 18 GKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETV 75
G++ P L V Y L+GA +F +E + D + EK FLE + +
Sbjct: 12 GRVLP---LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL---DQWA 65
Query: 76 VEDRKQDL-QGHLQKVKPQWFNRT-THWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLC 133
+E Q + + ++ V P+ + ++W F SS FF TV +T+GYG + P T G+ C
Sbjct: 66 MEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFC 125
Query: 134 MLYALFGIPLMFLVLTDTG 152
+ YAL GIPL + L G
Sbjct: 126 VFYALLGIPLNVIFLNHLG 144
Score = 36.6 bits (83), Expect = 0.039
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 275 QVERLDIPLPIIALIVFAYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHP 334
QV L + L + L++ + + + W F FYF F+TL+TIGFGD V+
Sbjct: 168 QVLGLALFLTLGTLVILIFPPMVFSHVEGWS----FSEGFYFAFITLSTIGFGDYVVGTD 223
Query: 335 NFFLFFSIY 343
+ S+Y
Sbjct: 224 PSKHYISVY 232
Score = 29.6 bits (65), Expect = 4.8
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 92 PQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKY-------LCMLYALFGIPLM 144
P F+ WSF +F ST+G+G T K+ L ++ L G+ +
Sbjct: 188 PMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVYRSLAAIWILLGLAWL 247
Query: 145 FLVL 148
L+L
Sbjct: 248 ALIL 251
>gi|205360973 potassium channel, subfamily K, member 16 isoform 4
[Homo sapiens]
Length = 262
Score = 63.2 bits (152), Expect = 4e-10
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 18 GKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETV 75
G++ P L V Y L+GA +F +E + D + EK FLE + +
Sbjct: 12 GRVLP---LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL---DQWA 65
Query: 76 VEDRKQDL-QGHLQKVKPQWFNRT-THWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLC 133
+E Q + + ++ V P+ + ++W F SS FF TV +T+GYG + P T G+ C
Sbjct: 66 MEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFC 125
Query: 134 MLYALFGIPLMFLVLTDTG 152
+ YAL GIPL + L G
Sbjct: 126 VFYALLGIPLNVIFLNHLG 144
Score = 35.8 bits (81), Expect = 0.067
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 275 QVERLDIPLPIIALIVFAYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTVL 331
QV L + L + L++ + + + W F FYF F+TL+TIGFGD V+
Sbjct: 168 QVLGLALFLTLGTLVILIFPPMVFSHVEGWS----FSEGFYFAFITLSTIGFGDYVV 220
>gi|205360971 potassium channel, subfamily K, member 16 isoform 1
[Homo sapiens]
Length = 322
Score = 63.2 bits (152), Expect = 4e-10
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 18 GKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETV 75
G++ P L V Y L+GA +F +E + D + EK FLE + +
Sbjct: 12 GRVLP---LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL---DQWA 65
Query: 76 VEDRKQDL-QGHLQKVKPQWFNRT-THWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLC 133
+E Q + + ++ V P+ + ++W F SS FF TV +T+GYG + P T G+ C
Sbjct: 66 MEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFC 125
Query: 134 MLYALFGIPLMFLVLTDTG 152
+ YAL GIPL + L G
Sbjct: 126 VFYALLGIPLNVIFLNHLG 144
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 275 QVERLDIPLPIIALIVFAYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHP 334
QV L + L + L++ + + + W F FYF F+TL+TIGFGD V+ HP
Sbjct: 168 QVLGLALFLTLGTLVILIFPPMVFSHVEGWS----FSEGFYFAFITLSTIGFGDYVVGHP 223
Query: 335 NFFL 338
F+
Sbjct: 224 LNFI 227
>gi|14149764 potassium channel, subfamily K, member 16 isoform 2
[Homo sapiens]
Length = 309
Score = 63.2 bits (152), Expect = 4e-10
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 18 GKLFPGLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEK--FLEELCRILNCSETV 75
G++ P L V Y L+GA +F +E + D + EK FLE + +
Sbjct: 12 GRVLP---LLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTCL---DQWA 65
Query: 76 VEDRKQDL-QGHLQKVKPQWFNRT-THWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLC 133
+E Q + + ++ V P+ + ++W F SS FF TV +T+GYG + P T G+ C
Sbjct: 66 MEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFC 125
Query: 134 MLYALFGIPLMFLVLTDTG 152
+ YAL GIPL + L G
Sbjct: 126 VFYALLGIPLNVIFLNHLG 144
Score = 36.6 bits (83), Expect = 0.039
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 275 QVERLDIPLPIIALIVFAYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHP 334
QV L + L + L++ + + + W F FYF F+TL+TIGFGD V+
Sbjct: 168 QVLGLALFLTLGTLVILIFPPMVFSHVEGWS----FSEGFYFAFITLSTIGFGDYVVGTD 223
Query: 335 NFFLFFSIY 343
+ S+Y
Sbjct: 224 PSKHYISVY 232
Score = 29.6 bits (65), Expect = 4.8
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 92 PQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKY-------LCMLYALFGIPLM 144
P F+ WSF +F ST+G+G T K+ L ++ L G+ +
Sbjct: 188 PMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVYRSLAAIWILLGLAWL 247
Query: 145 FLVL 148
L+L
Sbjct: 248 ALIL 251
>gi|4504847 potassium channel, subfamily K, member 1 [Homo sapiens]
Length = 336
Score = 60.5 bits (145), Expect = 3e-09
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 23 GLCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQD 82
G L +L+ Y + GAVVFS++E + +D ++ + R L E + E + +
Sbjct: 24 GFLVLGYLL-YLVFGAVVFSSVE-----LPYEDLLRQELRKLKRRFLEEHECLSEQQLEQ 77
Query: 83 LQGHLQKVKPQWFNRTTH------WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLY 136
G + + + ++ W F S+LFF TV ST GYG+ P++ GK C++Y
Sbjct: 78 FLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIY 137
Query: 137 ALFGIPLMFLVLT 149
++ GIP L LT
Sbjct: 138 SVIGIPFTLLFLT 150
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 288 LIVFAYISC----AAAILPFWETQLDFENAFYFCFVTLTTIGFGDTV 330
L+ F +SC AA+ E +F +FYFCF++L+TIG GD V
Sbjct: 186 LLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYV 232
Score = 33.5 bits (75), Expect = 0.33
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 309 DFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQNRL-IDIYK 367
DF +A +F L+T G+G TV F IY ++G+ + V R+ + + +
Sbjct: 103 DFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTR 162
Query: 368 NVMLFF 373
+L+F
Sbjct: 163 RPVLYF 168
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 101 WSFLSSLFFCCTVFSTVGY-------GYIYPVTRLGKYLCMLYALFGIPLMFLVL 148
W+FL S +FC ST+G GY L K Y L G+ M +VL
Sbjct: 210 WNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVL 264
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 58.2 bits (139), Expect = 1e-08
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 24 LCFLCFLVTYALVGAVVFSAIEDGQVLVAADD-GEF-EKFLEELCRILNCSETVVEDRKQ 81
L L ++ Y + GA+VF A+E A + GE EKFL + + ++
Sbjct: 7 LALLALVLLYLVSGALVFRALEQPHEQQAQRELGEVREKFLRAHPCVSDQELGLLIKEVA 66
Query: 82 DLQGHLQKVKPQWFNRTTH--WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALF 139
D G + + ++H W S+ FF T+ +T+GYG + T G+ C+ YAL
Sbjct: 67 DALGGGADPETNSTSNSSHSAWDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALV 126
Query: 140 GIPLMFLVLTDTGDILATIL 159
GIPL ++L GD L + L
Sbjct: 127 GIPLFGILLAGVGDRLGSSL 146
Score = 33.9 bits (76), Expect = 0.25
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 309 DFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQNRL 362
D +AF+F +TTIG+G+ L LF Y +VG+ + I V +RL
Sbjct: 89 DLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRL 142
Score = 32.0 bits (71), Expect = 0.96
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 285 IIALIVFAYISCAAAILP------FWETQLDFENAFYFCFVTLTTIGFGDTV 330
+++ ++F I C +L + E E A YF VTLTT+GFGD V
Sbjct: 169 VLSAMLFLLIGCLLFVLTPTFVFCYMEDWSKLE-AIYFVIVTLTTVGFGDYV 219
>gi|4758624 potassium channel, subfamily K, member 6 [Homo sapiens]
Length = 313
Score = 58.2 bits (139), Expect = 1e-08
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
W F S+LFF T+ +TVGYGY P+T GK + +AL G+P L+LT + L+ +L+
Sbjct: 91 WDFASALFFASTLITTVGYGYTTPLTDAGKAFSIAFALLGVPTTMLLLTASAQRLSLLLT 150
Score = 38.9 bits (89), Expect = 0.008
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 285 IIALIVFAYISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTV 330
++ ++V A I E F +AFYFCF++L+TIG GD V
Sbjct: 176 LLGVVVTVCFLVPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYV 221
Score = 35.8 bits (81), Expect = 0.067
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 101 WSFLSSLFFCCTVFSTVGYG-YI------YPVTRLGKYLCMLYALFGIPLMFLVL 148
WSFL + +FC ST+G G Y+ P L K L +Y G+ M LVL
Sbjct: 199 WSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYRALYKVLVTVYLFLGLVAMVLVL 253
>gi|4504851 potassium channel, subfamily K, member 5 [Homo sapiens]
Length = 499
Score = 51.6 bits (122), Expect = 1e-06
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 30 LVTYALVGAVVFSAIEDGQVLVAADDGEFEKF--LEEL-CRILNCSETVVEDRKQDLQGH 86
++ Y +GA +F +E+ A + +K L+E C + ++E
Sbjct: 12 IIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHLLKEFPCLGQEGLDKILEVVSDAAGQG 71
Query: 87 LQKVKPQWFNRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFL 146
+ Q FN +W++ +++ F TV +T+GYG + P T G+ C+ Y LFG+PL
Sbjct: 72 VAITGNQTFN---NWNWPNAMIFAATVITTIGYGNVAPKTPAGRLFCVFYGLFGVPLCLT 128
Query: 147 VLTDTG 152
++ G
Sbjct: 129 WISALG 134
Score = 31.6 bits (70), Expect = 1.3
Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 269 LDEVGQQVERLDIPLPIIALIVFAYISCAAAILPFWETQ-LDFENAFYFCFVTLTTIGFG 327
L + G + + I +I ++ + F T+ ++ Y+ F+T++TIGFG
Sbjct: 148 LTKRGVSLRKAQITCTVIFIVWGVLVHLVIPPFVFMVTEGWNYIEGLYYSFITISTIGFG 207
Query: 328 DTVL-------EHPNFFLFFSIYIIVGMEIVFIAFKLVQNRLIDIYKNV 369
D V H + F ++I +G+ + + + ++++K +
Sbjct: 208 DFVAGVNPSANYHALYRYFVELWIYLGLAWLSLFVNWKVSMFVEVHKAI 256
>gi|205361107 potassium channel, subfamily K, member 17 isoform 2
[Homo sapiens]
Length = 271
Score = 48.9 bits (115), Expect = 8e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDIL 155
W + S FF + +T+GYG + P T + C+ +AL GIPL +VL G ++
Sbjct: 101 WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLM 155
Score = 33.9 bits (76), Expect = 0.25
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 310 FENAFYFCFVTLTTIGFGDTVL 331
+ FYF F+TL+T+GFGD V+
Sbjct: 208 YTEGFYFAFITLSTVGFGDYVI 229
>gi|17025230 potassium channel, subfamily K, member 17 isoform 1
[Homo sapiens]
Length = 332
Score = 48.9 bits (115), Expect = 8e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDIL 155
W + S FF + +T+GYG + P T + C+ +AL GIPL +VL G ++
Sbjct: 101 WELVGSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLM 155
Score = 39.3 bits (90), Expect = 0.006
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 310 FENAFYFCFVTLTTIGFGDTVL------EHPNFFL-FFSIYIIVGMEIVFIAFKLVQNRL 362
+ FYF F+TL+T+GFGD V+ +P ++ S++I+ GM + + KL+ ++L
Sbjct: 208 YTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALIIKLILSQL 267
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 92 PQWFNRTTHWSFLSSLFFCCTVFSTVGYG-YIYPVTRLGKY------LCMLYALFGIPLM 144
P F+ WS+ +F STVG+G Y+ + +Y + L+ LFG+ +
Sbjct: 197 PLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWL 256
Query: 145 FLVL 148
L++
Sbjct: 257 ALII 260
>gi|5031821 potassium channel, subfamily K, member 7 isoform C [Homo
sapiens]
Length = 257
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
W S+L F ++ +T GYG++ P++ GK CM+YA G+P ++ L +LS
Sbjct: 90 WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLS 149
>gi|16118231 potassium channel, subfamily K, member 7 isoform A
[Homo sapiens]
Length = 307
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
W S+L F ++ +T GYG++ P++ GK CM+YA G+P ++ L +LS
Sbjct: 90 WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLS 149
>gi|16118235 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
W S+L F ++ +T GYG++ P++ GK CM+YA G+P ++ L +LS
Sbjct: 90 WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLS 149
>gi|16118233 potassium channel, subfamily K, member 7 isoform B
[Homo sapiens]
Length = 252
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILS 160
W S+L F ++ +T GYG++ P++ GK CM+YA G+P ++ L +LS
Sbjct: 90 WDLPSALLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLS 149
>gi|16306555 potassium channel, subfamily K, member 13 [Homo
sapiens]
Length = 408
Score = 46.2 bits (108), Expect = 5e-05
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 9/140 (6%)
Query: 24 LCFLCFLVTYALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDL 83
L +V Y L GA VFSA+E A + + ++ EE + + D +
Sbjct: 21 LLLAALIVLYLLGGAAVFSALE------LAHERQAKQRWEERLANFSRGHNLSRDELRGF 74
Query: 84 QGHLQKVKPQWF---NRTTHWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFG 140
H ++ N W F + +F TV ST+G+G P T GK + Y L G
Sbjct: 75 LRHYEEATRAGIRVDNVRPRWDFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGLVG 134
Query: 141 IPLMFLVLTDTGDILATILS 160
L + L TI++
Sbjct: 135 CSSTILFFNLFLERLITIIA 154
Score = 40.4 bits (93), Expect = 0.003
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 300 ILPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFKLVQ 359
+ P W DF AFYF ++TIGFG T +F Y +VG + F L
Sbjct: 91 VRPRW----DFTGAFYFVGTVVSTIGFGMTTPATVGGKIFLIFYGLVGCSSTILFFNLFL 146
Query: 360 NRLIDIYKNVM 370
RLI I +M
Sbjct: 147 ERLITIIAYIM 157
Score = 38.1 bits (87), Expect = 0.013
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 20/164 (12%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYI-------YPVTRLGKYLCMLYALFGIPLMFLVLTDTGD 153
WS+ SL+FC FST+G+G + Y L ++ ++ L G+ ++ + +
Sbjct: 222 WSYFDSLYFCFVAFSTIGFGDLVSSQNAHYESQGLYRFANFVFILMGVCCIYSLF----N 277
Query: 154 ILATILSTSYNRFRKFPFFTRPLLSKWCP---KSLFKKKPDPKPADEAVPQIIISAEELP 210
+++ ++ S N + R + S CP + L + + + + IS E
Sbjct: 278 VISILIKQSLN------WILRKMDSGCCPQCQRGLLRSRRNVVMPGSVRNRCNISIETDG 331
Query: 211 GPKLGTCPSRPSCSMELFERSHALEKQNTLQLPPQAMERSNSCP 254
+ T R S M + A K + L Q E +N CP
Sbjct: 332 VAESDTDGRRLSGEMISMKDLLAANKASLAILQKQLSEMANGCP 375
Score = 37.0 bits (84), Expect = 0.030
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 294 ISCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTV------LEHPNFFLFFS-IYIIV 346
ISC A+ + + ++ YFCFV +TIGFGD V E + F + ++I++
Sbjct: 208 ISCCASAMYTPIEGWSYFDSLYFCFVAFSTIGFGDLVSSQNAHYESQGLYRFANFVFILM 267
Query: 347 GMEIVFIAFKLV 358
G+ ++ F ++
Sbjct: 268 GVCCIYSLFNVI 279
>gi|11545761 potassium channel, subfamily K, member 12 [Homo
sapiens]
Length = 430
Score = 40.4 bits (93), Expect = 0.003
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 33 YALVGAVVFSAIEDGQVLVAADDGEFEKFLEELCRILNCSETVVEDRKQDLQGHLQKVKP 92
Y + GA VFSA+E + + E R + + V E + H +
Sbjct: 49 YLVAGATVFSALE------SPGEAEARARWGATLRNFSAAHGVAEPELRAFLRHYEAALA 102
Query: 93 QWFNRTT---HWSFLSSLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFG 140
W F + +F TV ST+G+G P T GK + Y LFG
Sbjct: 103 AGVRADALRPRWDFPGAFYFVGTVVSTIGFGMTTPATVGGKAFLIAYGLFG 153
Score = 39.3 bits (90), Expect = 0.006
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 285 IIALIVFAYI-SCAAAILPFWETQLDFENAFYFCFVTLTTIGFGDTV 330
++ L +FA + SC A+ + D+ ++ YFCFVT +TIGFGD V
Sbjct: 217 LLILGLFAVLLSCCASAMYTSVEGWDYVDSLYFCFVTFSTIGFGDLV 263
Score = 36.6 bits (83), Expect = 0.039
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 16/57 (28%)
Query: 101 WSFLSSLFFCCTVFSTVGYGYIYP----------VTRLGKYL------CMLYALFGI 141
W ++ SL+FC FST+G+G + + RLG +L C +Y+LF +
Sbjct: 241 WDYVDSLYFCFVTFSTIGFGDLVSSQHAAYRNQGLYRLGNFLFILLGVCCIYSLFNV 297
Score = 36.2 bits (82), Expect = 0.051
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 297 AAAILPFWETQLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFK 356
A A+ P W DF AFYF ++TIGFG T F Y + G + F
Sbjct: 107 ADALRPRW----DFPGAFYFVGTVVSTIGFGMTTPATVGGKAFLIAYGLFGCAGTILFFN 162
Query: 357 LVQNRLIDIYKNVM 370
L R+I + +M
Sbjct: 163 LFLERIISLLAFIM 176
>gi|19424136 potassium channel, subfamily V, member 2 [Homo sapiens]
Length = 545
Score = 38.1 bits (87), Expect = 0.013
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 106 SLFFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNR 165
S ++ STVGYG +YP T LG++ L FGI L + ++ IL S Y++
Sbjct: 447 SWWWAAVSISTVGYGDMYPETHLGRFFAFLCIAFGIILNGMPIS----ILYNKFSDYYSK 502
Query: 166 FRKFPFFT 173
+ + + T
Sbjct: 503 LKAYEYTT 510
>gi|88758576 Shaw-related voltage-gated potassium channel protein 4
isoform c [Homo sapiens]
Length = 626
Score = 37.0 bits (84), Expect = 0.030
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 108 FFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNRFR 167
++ +T+GYG +YP T G + L AL G VLT +A + N F
Sbjct: 428 WWAVVTMTTLGYGDMYPKTWSGMLVGALCALAG------VLT-----IAMPVPVIVNNFG 476
Query: 168 KFPFFTRPLLSKWCPKSLFKKKPDPKPADEAVPQIIISAEELPGPKLGTCPSRPSCSMEL 227
+ ++ + + PK +KK P+PA P S E P + S P+ +
Sbjct: 477 MY--YSLAMAKQKLPKK--RKKHVPRPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGM 532
Query: 228 FERSHALEKQN 238
ER A KQN
Sbjct: 533 IERKRADSKQN 543
>gi|24497462 Shaw-related voltage-gated potassium channel protein 4
isoform a [Homo sapiens]
Length = 635
Score = 37.0 bits (84), Expect = 0.030
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 108 FFCCTVFSTVGYGYIYPVTRLGKYLCMLYALFGIPLMFLVLTDTGDILATILSTSYNRFR 167
++ +T+GYG +YP T G + L AL G VLT +A + N F
Sbjct: 428 WWAVVTMTTLGYGDMYPKTWSGMLVGALCALAG------VLT-----IAMPVPVIVNNFG 476
Query: 168 KFPFFTRPLLSKWCPKSLFKKKPDPKPADEAVPQIIISAEELPGPKLGTCPSRPSCSMEL 227
+ ++ + + PK +KK P+PA P S E P + S P+ +
Sbjct: 477 MY--YSLAMAKQKLPKK--RKKHVPRPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGM 532
Query: 228 FERSHALEKQN 238
ER A KQN
Sbjct: 533 IERKRADSKQN 543
>gi|41349443 potassium channel, subfamily T, member 2 [Homo sapiens]
Length = 1135
Score = 36.6 bits (83), Expect = 0.039
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 307 QLDFENAFYFCFVTLTTIGFGDTVLEHPNFFLFFSIYIIVGMEIVFIAFK 356
+L+ ++ YFC VT +T+GFGD E + LF I V + ++ I F+
Sbjct: 226 KLNLFDSLYFCIVTFSTVGFGDVTPETWSSKLFVVAMICVALVVLPIQFE 275
Score = 32.3 bits (72), Expect = 0.74
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 102 SFLSSLFFCCTVFSTVGYGYIYPVT---RLGKYLCMLYALFGIPLMF 145
+ SL+FC FSTVG+G + P T +L + AL +P+ F
Sbjct: 228 NLFDSLYFCIVTFSTVGFGDVTPETWSSKLFVVAMICVALVVLPIQF 274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.143 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,750,695
Number of Sequences: 37866
Number of extensions: 685590
Number of successful extensions: 2650
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2430
Number of HSP's gapped (non-prelim): 226
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.