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Name: KCNC4 Sequence: fasta or formatted (635aa) NCBI GI: 24497462
Description:

Shaw-related voltage-gated potassium channel protein 4 isoform a

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [582aa] Shaw-related voltage-gated potassium channel protein 4 isoform b
alt prot [626aa] Shaw-related voltage-gated potassium channel protein 4 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         50           3
 C cysteine            2.8         18           2
 D aspartate           5.0         32           2
 E glutamate           6.6         42           3
 F phenylalanine       5.0         32           3
 G glycine             9.8         62           4
 H histidine           2.2         14           1
 I isoleucine          4.6         29           3
 K lysine              3.8         24           2
 L leucine             9.6         61           3
 M methionine          2.0         13           1
 N asparagine          2.5         16           2
 P proline             6.0         38           2
 Q glutamine           1.3          8           1
 R arginine            7.4         47           2
 S serine              6.6         42           2
 T threonine           6.5         41           2
 V valine              6.3         40           2
 W tryptophan          1.4          9           2
 Y tyrosine            2.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Shaw-related voltage-gated potassium channel protein... 
KCNC4                 0.953   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.847   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.599   Shaw-related voltage-gated potassium channel protei...
KCNC2                 0.598   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.596   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.568   Shaw-related voltage-gated potassium channel protein ...
KCNC2                 0.561   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.540   Shaw-related voltage-gated potassium channel protein...
KCNB1                 0.214   potassium voltage-gated channel, Shab-related subfami...
KCNB2                 0.213   potassium voltage-gated channel, Shab-related subfam...
KCNA1                 0.192   potassium voltage-gated channel subfamily A member ...
KCND1                 0.187   potassium voltage-gated channel, Shal-related subfam...
KCNA7                 0.185   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.184   potassium voltage-gated channel, shaker-related subfa...
KCNA10                0.184   potassium voltage-gated channel, shaker-related subfa...
KCND2                 0.183   potassium voltage-gated channel, Shal-related subfami...
KCNA2                 0.182   potassium voltage-gated channel, shaker-related subfa...
KCNA3                 0.180   potassium voltage-gated channel, shaker-related subf...
KCNA6                 0.179   potassium voltage-gated channel, shaker-related subfa...
KCND3                 0.176   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.176   potassium voltage-gated channel, Shal-related subfam...
KCNA5                 0.173   potassium voltage-gated channel, shaker-related subf...
KCNS3                 0.169   potassium voltage-gated channel delayed-rectifier pr...
KCNV1                 0.168   potassium channel, subfamily V, member 1 
KCNF1                 0.165   potassium voltage-gated channel, subfamily F, member...
KCNS1                 0.161   potassium voltage-gated channel delayed-rectifier pr...
KCNG1                 0.149   potassium voltage-gated channel, subfamily G, member...
KCNS2                 0.147   potassium voltage-gated channel, delayed-rectifier, ...
KCNG3                 0.145   potassium voltage-gated channel, subfamily G, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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