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Search of human proteins with 32455260
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32455260 peroxiredoxin 5 isoform b precursor [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32455260 peroxiredoxin 5 isoform b precursor [Homo sapiens] 335 9e-93
gi|6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens] 314 2e-86
gi|32455262 peroxiredoxin 5 isoform c precursor [Homo sapiens] 223 8e-59
gi|126352608 elastin isoform e precursor [Homo sapiens] 31 0.59
gi|126352446 elastin isoform d precursor [Homo sapiens] 31 0.59
gi|126352322 elastin isoform c precursor [Homo sapiens] 31 0.59
gi|126352700 elastin isoform b precursor [Homo sapiens] 31 0.59
gi|126352440 elastin isoform a precursor [Homo sapiens] 31 0.59
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 30 0.77
gi|239742765 PREDICTED: hypothetical protein XP_002342631 [Homo ... 30 0.77
gi|239740976 PREDICTED: hypothetical protein XP_002344291 [Homo ... 30 0.77
gi|27544941 myosin IF [Homo sapiens] 30 1.0
gi|4503011 carboxypeptidase N, polypeptide 1 precursor [Homo sap... 29 1.7
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 29 1.7
gi|38708309 PPPDE peptidase domain containing 1 [Homo sapiens] 29 2.2
gi|7706435 headcase [Homo sapiens] 28 2.9
gi|150378478 PR domain containing 8 [Homo sapiens] 28 2.9
gi|150378439 PR domain containing 8 [Homo sapiens] 28 2.9
gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens] 28 3.8
gi|4557529 post-synaptic density protein 95 isoform 1 [Homo sapi... 28 5.0
gi|192447426 post-synaptic density protein 95 isoform 2 [Homo sa... 28 5.0
gi|150170699 kinesin family member 26A [Homo sapiens] 28 5.0
gi|148746189 multiple PDZ domain protein [Homo sapiens] 27 6.5
gi|189571647 hypothetical protein LOC79684 [Homo sapiens] 27 6.5
gi|7710154 mitochondrial tryptophanyl tRNA synthetase 2 isoform ... 27 6.5
gi|7706607 LEM domain containing 3 [Homo sapiens] 27 6.5
gi|197333809 joined to JAZF1 [Homo sapiens] 27 8.5
gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo ... 27 8.5
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 27 8.5
gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo ... 27 8.5
>gi|32455260 peroxiredoxin 5 isoform b precursor [Homo sapiens]
Length = 170
Score = 335 bits (860), Expect = 9e-93
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD
Sbjct: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
Query: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLL 120
AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLL
Sbjct: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLL 120
Query: 121 LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 170
LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL
Sbjct: 121 LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 170
>gi|6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens]
Length = 214
Score = 314 bits (805), Expect = 2e-86
Identities = 170/214 (79%), Positives = 170/214 (79%), Gaps = 44/214 (20%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD
Sbjct: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
Query: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSK------------------ 102
AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSK
Sbjct: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGV 120
Query: 103 --------------------------VRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKR 136
VRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKR
Sbjct: 121 QVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKR 180
Query: 137 FSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 170
FSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL
Sbjct: 181 FSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 214
>gi|32455262 peroxiredoxin 5 isoform c precursor [Homo sapiens]
Length = 125
Score = 223 bits (567), Expect = 8e-59
Identities = 125/170 (73%), Positives = 125/170 (73%), Gaps = 45/170 (26%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIK
Sbjct: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIK--- 57
Query: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLL 120
VRLLADPTGAFGKETDLL
Sbjct: 58 ------------------------------------------VRLLADPTGAFGKETDLL 75
Query: 121 LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 170
LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL
Sbjct: 76 LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 125
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 30.8 bits (68), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
G GV AGY G G Q+AAAAA + + ++ +G A P V A
Sbjct: 231 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVP-GVPGA 288
Query: 62 IPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPG 99
IP + G G A K +G PG
Sbjct: 289 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPG 325
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 30.8 bits (68), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
G GV AGY G G Q+AAAAA + + ++ +G A P V A
Sbjct: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVP-GVPGA 293
Query: 62 IPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPG 99
IP + G G A K +G PG
Sbjct: 294 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPG 330
Score = 27.3 bits (59), Expect = 6.5
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 22 GGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAEL 81
GG + AAAA + ++ GGV + AP G +P +PG V ++
Sbjct: 94 GGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP-------QPGAGVKPGKV 146
Query: 82 -FKGKKGVLFG--VPGAFTPGCSKVRLLADPTGA 112
G GV G +PGA PG L PTGA
Sbjct: 147 PGVGLPGVYPGGVLPGARFPGVGV--LPGVPTGA 178
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 30.8 bits (68), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
G GV AGY G G Q+AAAAA + + ++ +G A P V A
Sbjct: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVP-GVPGA 293
Query: 62 IPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPG 99
IP + G G A K +G PG
Sbjct: 294 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPG 330
Score = 27.3 bits (59), Expect = 6.5
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 22 GGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAEL 81
GG + AAAA + ++ GGV + AP G +P +PG V ++
Sbjct: 94 GGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVP-------QPGAGVKPGKV 146
Query: 82 -FKGKKGVLFG--VPGAFTPGCSKVRLLADPTGA 112
G GV G +PGA PG L PTGA
Sbjct: 147 PGVGLPGVYPGGVLPGARFPGVGV--LPGVPTGA 178
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 30.8 bits (68), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
G GV AGY G G Q+AAAAA + + ++ +G A P V A
Sbjct: 221 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVP-GVPGA 278
Query: 62 IPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPG 99
IP + G G A K +G PG
Sbjct: 279 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPG 315
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 30.8 bits (68), Expect = 0.59
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
G GV AGY G G Q+AAAAA + + ++ +G A P V A
Sbjct: 231 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAA-AKFGAGAAGVLPGVGGAGVP-GVPGA 288
Query: 62 IPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPG 99
IP + G G A K +G PG
Sbjct: 289 IPGIGGIAG-VGTPAAAAAAAAAAKAAKYGAAAGLVPG 325
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 30.4 bits (67), Expect = 0.77
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAA-------AMA 54
G AG + A IL GG GG AAAAA E A AAA A
Sbjct: 205 GGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKART 264
Query: 55 PIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFG 114
P A A +LAE K K+ LFG G + V ADP+ G
Sbjct: 265 PSASASASSAASASAALAAPGKHLAEK-KVKRVYLFGGLGTSSSPVGGVGAGADPSDPLG 323
Score = 26.9 bits (58), Expect = 8.5
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 8 ALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
A ++S G + GGAGG + A+ G GG ++ + AAA+ A + G A
Sbjct: 194 AQKKSCGSKVAGGAGGGVSKPHAKLILAG--GGGGGKAAAAAAASFAAEQAGAA 245
>gi|239742765 PREDICTED: hypothetical protein XP_002342631 [Homo
sapiens]
Length = 149
Score = 30.4 bits (67), Expect = 0.77
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMA 54
G + C R AG + GG A+ A R C E E +G V++F R A A
Sbjct: 16 GRSWTCRSGRKAGALDWGGRSEARASWAWRVCCEAEAEAGPVQAFERQEAGPA 68
>gi|239740976 PREDICTED: hypothetical protein XP_002344291 [Homo
sapiens]
Length = 149
Score = 30.4 bits (67), Expect = 0.77
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 2 GLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMA 54
G + C R AG + GG A+ A R C E E +G V++F R A A
Sbjct: 16 GRSWTCRSGRKAGALDWGGRSEARASWAWRVCCEAEAEAGPVQAFERQEAGPA 68
>gi|27544941 myosin IF [Homo sapiens]
Length = 1098
Score = 30.0 bits (66), Expect = 1.0
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 32 RCSEGEWASGGVRS--FSRAAAAMAPIKVGDAIPAVEVFEGEP-GNKVNLAELFKGK 85
R + W GG RS FSR +A +KVG V V +G P +K + KGK
Sbjct: 878 RVKKEGWGGGGTRSVTFSRGFGDLAVLKVGGRTLTVSVGDGLPKSSKPTRKGMAKGK 934
>gi|4503011 carboxypeptidase N, polypeptide 1 precursor [Homo
sapiens]
Length = 458
Score = 29.3 bits (64), Expect = 1.7
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 93 PGAFTPGCSKVRLLADPTG--AFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKAL- 149
PG P +V+ + + G A G+E L L + L F NR +R ++QD + L
Sbjct: 69 PGIHEPLEPEVKYVGNMHGNEALGRELMLQLSEFLCEEFRNRN-QRIVQLIQDTRIHILP 127
Query: 150 NVEPDGTGLTCSLAPN 165
++ PDG + + PN
Sbjct: 128 SMNPDGYEVAAAQGPN 143
>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
membrane-bound form [Homo sapiens]
Length = 398
Score = 29.3 bits (64), Expect = 1.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 22 GGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGN 74
GG ++AAA + S GE +GG R A+ P GD+ P V+ G N
Sbjct: 62 GGSNSAAAIGQ-SSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASN 113
>gi|38708309 PPPDE peptidase domain containing 1 [Homo sapiens]
Length = 194
Score = 28.9 bits (63), Expect = 2.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 59 GDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFG 91
G P +FE PGN L E FK K+ V+ G
Sbjct: 44 GHPYPFSGIFEISPGNASELGETFKFKEAVVLG 76
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 28.5 bits (62), Expect = 2.9
Identities = 21/59 (35%), Positives = 24/59 (40%)
Query: 3 LAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGDA 61
LA A +AG L AG +AAA A A G + AAAA GDA
Sbjct: 30 LAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAGGAGTGAANAAAAAGAAAAGDA 88
>gi|150378478 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 28.5 bits (62), Expect = 2.9
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
+G AG + G GGAGG AA+ R S S RSFS+ ++P+ +G
Sbjct: 466 LGSAGSTSGGGGTGAGAAGGAGGGQGAASDERKSA---FSQPARSFSQ----LSPLVLGQ 518
Query: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFG 114
+ A+E P + V L+ P A P K++ AD G G
Sbjct: 519 KLGALE--PCHPADGVGPTRLY----------PAAADPLAVKLQGAADLNGGCG 560
>gi|150378439 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 28.5 bits (62), Expect = 2.9
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVGD 60
+G AG + G GGAGG AA+ R S S RSFS+ ++P+ +G
Sbjct: 466 LGSAGSTSGGGGTGAGAAGGAGGGQGAASDERKSA---FSQPARSFSQ----LSPLVLGQ 518
Query: 61 AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFG 114
+ A+E P + V L+ P A P K++ AD G G
Sbjct: 519 KLGALE--PCHPADGVGPTRLY----------PAAADPLAVKLQGAADLNGGCG 560
>gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens]
Length = 486
Score = 28.1 bits (61), Expect = 3.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 69 EGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLLLDDSL 125
+G+PG + E + + GV GAF G V A P G +G L ++S+
Sbjct: 17 KGKPGPR---KEQLPARGSLSRGVLGAFEVGSQGVEAAASPNGQYGPSWGLAAEESV 70
>gi|4557529 post-synaptic density protein 95 isoform 1 [Homo
sapiens]
Length = 767
Score = 27.7 bits (60), Expect = 5.0
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 43 VRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGA----FTP 98
VR + +AA A + G + + P KV +L KG KG+ F + G P
Sbjct: 168 VREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIP 227
Query: 99 GCSKVRLL-ADPTGAFGKETDLLLDDSLVSI 128
G + + + GA K+ L + D ++++
Sbjct: 228 GDNSIYVTKIIEGGAAHKDGRLQIGDKILAV 258
>gi|192447426 post-synaptic density protein 95 isoform 2 [Homo
sapiens]
Length = 721
Score = 27.7 bits (60), Expect = 5.0
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 43 VRSFSRAAAAMAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGA----FTP 98
VR + +AA A + G + + P KV +L KG KG+ F + G P
Sbjct: 122 VREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIP 181
Query: 99 GCSKVRLL-ADPTGAFGKETDLLLDDSLVSI 128
G + + + GA K+ L + D ++++
Sbjct: 182 GDNSIYVTKIIEGGAAHKDGRLQIGDKILAV 212
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 27.7 bits (60), Expect = 5.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 20 GAGG--QSAAAAARRCSEGEWASGGVRSF----SRAAAAMAPIKVGDAIPAVEVFEGEPG 73
G GG + A++C EG W+ V SF A AA+A + V D + G G
Sbjct: 211 GLGGALSTVTIQAQQCLEGMWSVSRVNSFLPPACLAEAAVAAVAVADTVRECPPVAGPDG 270
>gi|148746189 multiple PDZ domain protein [Homo sapiens]
Length = 2041
Score = 27.3 bits (59), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 75 KVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLA-DPTGAFGKETDLLLDDSLVSIFG 130
++++ EL KG G+ + G V ++ DP GA GK+ L + D L+ I G
Sbjct: 1347 ELHMIELEKGHSGLGLSLAGNKDRSRMSVFIVGIDPNGAAGKDGRLQIADELLEING 1403
>gi|189571647 hypothetical protein LOC79684 [Homo sapiens]
Length = 507
Score = 27.3 bits (59), Expect = 6.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 1 MGLAGVCALRRSAGYILVGGAGGQSAAAAARRCSEGEW 38
+GL G A S + GG GG +AAAAA C W
Sbjct: 68 LGLGGRSAASSSVSFSPGGGGGGAAAAAAA-ACRGMSW 104
>gi|7710154 mitochondrial tryptophanyl tRNA synthetase 2 isoform 1
precursor [Homo sapiens]
Length = 360
Score = 27.3 bits (59), Expect = 6.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 77 NLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGK 115
+LA+ F K G F VP + KV+ L DP+ K
Sbjct: 191 DLAQGFNKKYGEFFPVPESILTSMKKVKSLRDPSAKMSK 229
>gi|7706607 LEM domain containing 3 [Homo sapiens]
Length = 911
Score = 27.3 bits (59), Expect = 6.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 5 GVCALRRSAGYILVGGAGGQSAAAAA 30
G+C + S L+GG GG SAA AA
Sbjct: 106 GLCRISASGPESLLGGPGGASAAPAA 131
>gi|197333809 joined to JAZF1 [Homo sapiens]
Length = 739
Score = 26.9 bits (58), Expect = 8.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 19 GGAGGQSAAAAARRCS--EGEWASGGVRSFSRAAAAMAPIKVGDAIPAVE 66
GG GG +A AAA G + GG S+S ++++ A G A+ V+
Sbjct: 23 GGFGGSAAVAAATASGGKSGGGSCGGGGSYSASSSSSAAAAAGAAVLPVK 72
>gi|239754415 PREDICTED: hypothetical protein XP_002345991 [Homo
sapiens]
Length = 205
Score = 26.9 bits (58), Expect = 8.5
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 11 RSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVG-DAIPAVEVFE 69
R G +L GG+ AA R CS A G F+R A + +P + G A PA
Sbjct: 49 RVPGSVLGVQGGGEDRKAAPRGCSAAGEARGS--GFTRQALSRSPAEPGPGAQPA--ALR 104
Query: 70 GEPGNKVNLA 79
+PG ++++
Sbjct: 105 SQPGTWLSVS 114
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 26.9 bits (58), Expect = 8.5
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 22 GGQSAAAAARRCSEGEWASGGVRSFS-RAAAAMAPIKVGDAIPAV 65
GG AAAAA RC G G R FS R++ A P++ A PA+
Sbjct: 237 GGSVAAAAAARCL-GLSPPGRSRLFSPRSSLARPPLRFPPARPAL 280
>gi|239748949 PREDICTED: hypothetical protein XP_002346841 [Homo
sapiens]
Length = 205
Score = 26.9 bits (58), Expect = 8.5
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 11 RSAGYILVGGAGGQSAAAAARRCSEGEWASGGVRSFSRAAAAMAPIKVG-DAIPAVEVFE 69
R G +L GG+ AA R CS A G F+R A + +P + G A PA
Sbjct: 49 RVPGSVLGVQGGGEDRKAAPRGCSAAGEARGS--GFTRQALSRSPAEPGPGAQPA--ALR 104
Query: 70 GEPGNKVNLA 79
+PG ++++
Sbjct: 105 SQPGTWLSVS 114
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,621,353
Number of Sequences: 37866
Number of extensions: 285524
Number of successful extensions: 871
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 832
Number of HSP's gapped (non-prelim): 53
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.