Guide to the Human Genome
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Name: WARS2 Sequence: fasta or formatted (360aa) NCBI GI: 7710154
Description:

mitochondrial tryptophanyl tRNA synthetase 2 isoform 1 precursor

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [220aa] mitochondrial tryptophanyl tRNA synthetase 2 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         32           3
 C cysteine            0.8          3           1
 D aspartate           5.3         19           1
 E glutamate           5.6         20           2
 F phenylalanine       2.8         10           2
 G glycine             4.7         17           1
 H histidine           3.3         12           1
 I isoleucine          5.3         19           1
 K lysine              8.9         32           2
 L leucine            10.6         38           2
 M methionine          2.2          8           1
 N asparagine          1.4          5           1
 P proline             4.2         15           1
 Q glutamine           5.6         20           2
 R arginine            4.7         17           2
 S serine              7.8         28           1
 T threonine           5.0         18           2
 V valine              9.4         34           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial tryptophanyl tRNA synthetase 2 isoform ... 
WARS2                 0.588   mitochondrial tryptophanyl tRNA synthetase 2 isoform...
RRP12                 0.013   ribosomal RNA processing 12 homolog isoform 1 [Homo...
HTR1F                 0.010   5-hydroxytryptamine (serotonin) receptor 1F 
PLCL1                 0.009   phospholipase C-like 1 isoform a 
PLCL1                 0.009   phospholipase C-like 1 isoform b 
NUP62                 0.007   nucleoporin 62kDa 
NUP62                 0.007   nucleoporin 62kDa 
NUP62                 0.007   nucleoporin 62kDa 
NUP62                 0.007   nucleoporin 62kDa 
DMWD                  0.007   dystrophia myotonica-containing WD repeat motif prot...
IQCK                  0.007   IQ motif containing K 
DUOX1                 0.006   dual oxidase 1 precursor 
DUOX1                 0.006   dual oxidase 1 precursor 
CHD4                  0.006   chromodomain helicase DNA binding protein 4 
KIN                   0.006   HsKin17 protein 
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform ...
CHD3                  0.006   chromodomain helicase DNA binding protein 3 isoform...
DNAJC8                0.006   DnaJ (Hsp40) homolog, subfamily C, member 8 
HIP1R                 0.004   huntingtin interacting protein-1-related 
LOC100294412          0.004   PREDICTED: similar to KIAA0655 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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