Guide to the Human Genome
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Name: KRTAP13-4 Sequence: fasta or formatted (160aa) NCBI GI: 31791004
Description:

keratin associated protein 13-4

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5          4           1
 C cysteine           12.5         20           2
 D aspartate           0.6          1           1
 E glutamate           0.6          1           1
 F phenylalanine       5.6          9           1
 G glycine            10.0         16           2
 H histidine           0.0          0           0
 I isoleucine          1.2          2           1
 K lysine              1.9          3           1
 L leucine             6.9         11           1
 M methionine          0.6          1           1
 N asparagine          2.5          4           1
 P proline             5.6          9           1
 Q glutamine           4.4          7           1
 R arginine            8.1         13           1
 S serine             20.6         33           3
 T threonine           4.4          7           2
 V valine              0.6          1           1
 W tryptophan          1.2          2           1
 Y tyrosine           10.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 13-4 
KRTAP13-1             0.686   keratin associated protein 13-1 
KRTAP13-2             0.647   keratin associated protein 13-2 
KRTAP13-3             0.518   keratin associated protein 13-3 
KRTAP15-1             0.251   keratin associated protein 15-1 
KRTAP11-1             0.162   keratin associated protein 11-1 
KRTAP4-4              0.099   keratin associated protein 4.4 
KRTAP4-12             0.096   keratin associated protein 4-12 
KRTAP4-2              0.090   keratin associated protein 4-2 
LOC728318             0.081   PREDICTED: hypothetical protein 
KRTAP10-5             0.081   keratin associated protein 10-5 
KRTAP9-4              0.081   keratin associated protein 9-4 
KRTAP4-8              0.081   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.081   keratin associated protein 4-9 
KRTAP4-7              0.081   keratin associated protein 4-7 
KRTAP4-7              0.081   PREDICTED: keratin associated protein 4-7 
LOC728318             0.078   PREDICTED: hypothetical protein 
LOC728318             0.078   PREDICTED: hypothetical protein 
KRTAP4-9              0.078   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.078   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.078   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.078   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.075   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.075   keratin associated protein 4.8 
KRTAP4-5              0.075   keratin associated protein 4-5 
KRTAP2-1              0.075   keratin associated protein KRTAP2.1A 
KRTAP4-8              0.075   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.075   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.072   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.072   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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