Guide to the Human Genome
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Name: KRTAP15-1 Sequence: fasta or formatted (137aa) NCBI GI: 31790998
Description:

keratin associated protein 15-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.2          3           1
 C cysteine           10.9         15           2
 D aspartate           0.7          1           1
 E glutamate           1.5          2           1
 F phenylalanine       5.8          8           1
 G glycine             8.8         12           1
 H histidine           0.7          1           1
 I isoleucine          2.2          3           1
 K lysine              0.7          1           1
 L leucine             6.6          9           1
 M methionine          0.7          1           1
 N asparagine          7.3         10           1
 P proline             5.1          7           1
 Q glutamine           5.1          7           1
 R arginine            3.6          5           1
 S serine             18.2         25           2
 T threonine           9.5         13           2
 V valine              0.7          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            9.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 15-1 
KRTAP13-2             0.462   keratin associated protein 13-2 
KRTAP13-1             0.452   keratin associated protein 13-1 
KRTAP13-3             0.376   keratin associated protein 13-3 
KRTAP13-4             0.301   keratin associated protein 13-4 
KRTAP11-1             0.129   keratin associated protein 11-1 
LOC732428             0.097   PREDICTED: keratin-associated protein 9-2-like 2-li...
LOC728318             0.082   PREDICTED: hypothetical protein 
LOC728318             0.082   PREDICTED: hypothetical protein 
LOC728318             0.079   PREDICTED: hypothetical protein 
LOC728341             0.065   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.065   keratin associated protein 9.2 
KRTAP4-8              0.061   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.061   PREDICTED: similar to keratin associated protein 4-...
LOC100131696          0.061   PREDICTED: keratin associated protein 
LOC100131696          0.061   PREDICTED: keratin associated protein 
LOC100288060          0.061   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-8              0.061   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.057   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.057   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.057   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.057   keratin associated protein 4.8 
KRTAP4-3              0.054   keratin associated protein 4-3 
KRTAP4-7              0.050   keratin associated protein 4-7 
KRTAP4-7              0.050   PREDICTED: keratin associated protein 4-7 
KRTAP9-8              0.050   keratin associated protein 9.8 
KRTAP10-8             0.047   keratin associated protein 10-8 
KRTAP4-4              0.047   keratin associated protein 4.4 
KRTAP26-1             0.047   keratin associated protein 26-1 
KRTAP17-1             0.047   keratin associated protein 17-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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