AUP1 25676

Name: AUP1	Sequence: fasta or formatted (410aa)		NCBI GI: 31712030
Description: ancient ubiquitous protein 1		Referenced in: Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 27 1 C cysteine 2.0 8 1 D aspartate 3.4 14 1 E glutamate 5.9 24 3 F phenylalanine 5.1 21 1 G glycine 5.1 21 1 H histidine 2.2 9 1 I isoleucine 1.7 7 1 K lysine 2.4 10 1 L leucine 14.1 58 3 M methionine 1.5 6 1 N asparagine 2.0 8 1 P proline 8.5 35 2 Q glutamine 5.4 22 2 R arginine 8.3 34 3 S serine 8.3 34 2 T threonine 6.1 25 2 V valine 9.0 37 2 W tryptophan 1.5 6 1 Y tyrosine 1.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ancient ubiquitous protein 1 AMFR 0.024 autocrine motility factor receptor PPP1R15A 0.010 protein phosphatase 1, regulatory subunit 15A [Homo... LPCAT4 0.010 lysophosphatidylcholine acyltransferase 4 LOC100292122 0.009 PREDICTED: hypothetical protein XP_002345138 LOC100286986 0.009 PREDICTED: hypothetical protein XP_002344191 ATF7IP 0.009 activating transcription factor 7 interacting protei... CEP350 0.009 centrosome-associated protein 350 ATF2 0.008 activating transcription factor 2 ZSCAN18 0.008 zinc finger and SCAN domain containing 18 isoform 3... ZSCAN18 0.008 zinc finger and SCAN domain containing 18 isoform 3... MAVS 0.008 virus-induced signaling adapter ZSCAN18 0.008 zinc finger and SCAN domain containing 18 isoform 1... UBAP2L 0.008 ubiquitin associated protein 2-like isoform a [Homo... UBAP2L 0.008 ubiquitin associated protein 2-like isoform b [Homo... TAF4 0.006 TBP-associated factor 4 GLT25D2 0.006 glycosyltransferase 25 domain containing 2 ZFHX3 0.006 AT-binding transcription factor 1 CLCN2 0.006 chloride channel 2 PDZD2 0.006 PDZ domain containing 2 KIAA0774 0.006 hypothetical protein LOC23281 isoform a PAGE5 0.006 P antigen family, member 5 isoform 1 LOC100292454 0.006 PREDICTED: similar to hCG2019076 LOC100287166 0.006 PREDICTED: similar to hCG2019076 LOC100287166 0.006 PREDICTED: hypothetical protein XP_002344224 TFEC 0.006 transcription factor EC isoform b TFEC 0.006 transcription factor EC isoform a LOC100129697 0.005 PREDICTED: hypothetical protein WIBG 0.005 within bgcn homolog isoform 2 WIBG 0.005 within bgcn homolog isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.