Search of human proteins with 31581534

Search of human proteins with 31581534

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31581534 tRNA isopentenyltransferase 1 [Homo sapiens]
         (467 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31581534 tRNA isopentenyltransferase 1 [Homo sapiens]              937   0.0  
gi|62750354 matrin 3 [Homo sapiens]                                    33   0.42 
gi|21626466 matrin 3 [Homo sapiens]                                    33   0.42 
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               33   0.72 
gi|50428935 BPY2 interacting protein 1 [Homo sapiens]                  32   0.94 
gi|34101286 zinc finger RNA binding protein [Homo sapiens]             32   0.94 
gi|27414497 zinc finger CCCH-type containing 7A [Homo sapiens]         32   0.94 
gi|50962882 G patch domain containing 8 [Homo sapiens]                 32   1.2  
gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens]          32   1.6  
gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens]          32   1.6  
gi|4758648 kinesin family member 5B [Homo sapiens]                     32   1.6  
gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens]          32   1.6  
gi|31563534 replication factor C 2 isoform 1 [Homo sapiens]            32   1.6  
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ...    32   1.6  
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ...    32   1.6  
gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1 ...    32   1.6  
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ...    32   1.6  
gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1 [...    32   1.6  
gi|109134347 NY-REN-58 antigen [Homo sapiens]                          32   1.6  
gi|109134355 NY-REN-58 antigen [Homo sapiens]                          32   1.6  
gi|157364939 phosphodiesterase 6C [Homo sapiens]                       31   2.1  
gi|4758894 PET112-like [Homo sapiens]                                  31   2.1  
gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens]         31   2.7  
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ...    31   2.7  
gi|153792148 threonine synthase-like 1 [Homo sapiens]                  31   2.7  
gi|7706212 TAF9 RNA polymerase II, TATA box binding protein-asso...    30   3.6  
gi|6912440 zinc finger protein 346 [Homo sapiens]                      30   3.6  
gi|24430132 WW domain binding protein 2 [Homo sapiens]                 30   3.6  
gi|44681484 cell division cycle associated 2 [Homo sapiens]            30   3.6  
gi|28827813 NLR family, pyrin domain containing 14 [Homo sapiens]      30   4.7  

>gi|31581534 tRNA isopentenyltransferase 1 [Homo sapiens]
          Length = 467

 Score =  937 bits (2422), Expect = 0.0
 Identities = 467/467 (100%), Positives = 467/467 (100%)

Query: 1   MASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVY 60
           MASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVY
Sbjct: 1   MASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVY 60

Query: 61  EGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVG 120
           EGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVG
Sbjct: 61  EGLDIITNKVSAQEQRICRHHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVG 120

Query: 121 GTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPH 180
           GTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPH
Sbjct: 121 GTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPH 180

Query: 181 DKRKVARSLQVFEETGISHSEFLHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERL 240
           DKRKVARSLQVFEETGISHSEFLHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERL
Sbjct: 181 DKRKVARSLQVFEETGISHSEFLHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERL 240

Query: 241 DKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTL 300
           DKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTL
Sbjct: 241 DKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTL 300

Query: 301 ETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSKWEESVL 360
           ETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSKWEESVL
Sbjct: 301 ETSNQLLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSKWEESVL 360

Query: 361 EPALEIVQSFIQGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSHL 420
           EPALEIVQSFIQGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSHL
Sbjct: 361 EPALEIVQSFIQGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSHL 420

Query: 421 NQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELKCSV 467
           NQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELKCSV
Sbjct: 421 NQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELKCSV 467


>gi|62750354 matrin 3 [Homo sapiens]
          Length = 847

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 395 HLCDLCDRIIIGDREWAAHIKSKSH 419
           HLC +CD  +  ++EW+ HI   SH
Sbjct: 291 HLCSICDLPVHSNKEWSQHINGASH 315


>gi|21626466 matrin 3 [Homo sapiens]
          Length = 847

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 395 HLCDLCDRIIIGDREWAAHIKSKSH 419
           HLC +CD  +  ++EW+ HI   SH
Sbjct: 291 HLCSICDLPVHSNKEWSQHINGASH 315


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 395 HLCDLCDRIIIGDREWAAHIKSKSH 419
           H+C +CD+ +   ++W  H+K K H
Sbjct: 412 HICSICDKKVFDLKDWELHVKGKLH 436


>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
          Length = 1059

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 11/102 (10%)

Query: 289 HEYLITEGKCTLETSNQLLKKG---IEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVY 345
           H+ L+  G C  ET   LL+ G        QV K      +R +++   + P P+ PP+ 
Sbjct: 112 HKLLVLAGPCLEETGELLLQTGGFSPHHFLQVLK------DREIRDILATTPPPVQPPIL 165

Query: 346 GLEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNE 387
            +       W +  L PA+  +Q  ++       P ++P +E
Sbjct: 166 TITCPTFGDWAQ--LAPAVPGLQGALRLQLRLNPPAQLPNSE 205


>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
          Length = 1074

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 372 QGHKPTATPIKMPYNEAENKRSYH------LCDLCDRIIIGDREWAAHIKSKSHLNQLKK 425
           Q HK     +K   N + +  S         C+LCD    G   +AAHI+   H   +K 
Sbjct: 353 QKHKKKEAALKASQNTSSSNSSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL 412

Query: 426 RRRLDSDAVNT---IESQSVSPDHNKEPKEKGSP 456
             +L     +T   + SQ+ S       K   SP
Sbjct: 413 HTKLGKPIPSTEPNVVSQATSSTAVSASKPTASP 446


>gi|27414497 zinc finger CCCH-type containing 7A [Homo sapiens]
          Length = 971

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 372 QGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSH 419
           Q +K     I MP + AE    +H C +C +    +++W  HI S+ H
Sbjct: 835 QSNKENGKQIHMPTDYAEVTVDFH-CWMCGKNCNSEKQWQGHISSEKH 881


>gi|50962882 G patch domain containing 8 [Homo sapiens]
          Length = 1502

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/103 (21%), Positives = 43/103 (41%)

Query: 347 LEVSDVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNEAENKRSYHLCDLCDRIIIG 406
           L+ ++ +     VLE   E  +   Q +K      K      E+ R+   C+LCD+    
Sbjct: 88  LDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQK 147

Query: 407 DREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPDHNKE 449
            +E+  HI S  H ++ + +     +    + S+S   +  +E
Sbjct: 148 HQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQE 190


>gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens]
          Length = 1660

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 389 ENKRSYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSD----AVNTIESQSVSP 444
           E    + LC  C+   + +++   H  ++ H+N L + + L S      + T+   ++  
Sbjct: 609 EKHNMHFLCTPCNLFFLSEKDVEEHKATEKHINSLVQPKTLQSSNSDLVLQTLPLSTLES 668

Query: 445 DHNKEPKEKGSPGQNDQELKCSV 467
           ++ KE  +       ++ LK  V
Sbjct: 669 ENAKESMDDSGKASQEEPLKSRV 691


>gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens]
          Length = 1815

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 389 ENKRSYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSD----AVNTIESQSVSP 444
           E    + LC  C+   + +++   H  ++ H+N L + + L S      + T+   ++  
Sbjct: 609 EKHNMHFLCTPCNLFFLSEKDVEEHKATEKHINSLVQPKTLQSSNSDLVLQTLPLSTLES 668

Query: 445 DHNKEPKEKGSPGQNDQELKCSV 467
           ++ KE  +       ++ LK  V
Sbjct: 669 ENAKESMDDSGKASQEEPLKSRV 691


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 149 DRKVELEKEDGLVLHKRLSQVDPEMAAKLHP----HDKRKVAR-SLQVFEETGISHSEFL 203
           ++K+ LE+E   V H++L   D E + KLH      D+R+ AR  L+  EET     + L
Sbjct: 737 NQKMMLEQERLRVEHEKLKATDQEKSRKLHELTVMQDRREQARQDLKGLEETVAKELQTL 796

Query: 204 H 204
           H
Sbjct: 797 H 797


>gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens]
          Length = 2248

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 389 ENKRSYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSD----AVNTIESQSVSP 444
           E    + LC  C+   + +++   H  ++ H+N L + + L S      + T+   ++  
Sbjct: 609 EKHNMHFLCTPCNLFFLSEKDVEEHKATEKHINSLVQPKTLQSSNSDLVLQTLPLSTLES 668

Query: 445 DHNKEPKEKGSPGQNDQELKCSV 467
           ++ KE  +       ++ LK  V
Sbjct: 669 ENAKESMDDSGKASQEEPLKSRV 691


>gi|31563534 replication factor C 2 isoform 1 [Homo sapiens]
          Length = 354

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 23  LPLVVILGATGTGKSTLALQLGQRLGGEIVSADSMQVY----EGLDIITNKVSAQEQR 76
           +P ++I G  GTGK+T  L L + L G  +    +++      G+D++ NK+    Q+
Sbjct: 69  VPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQ 126


>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
           [Homo sapiens]
          Length = 818

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPD 445
           C +C+R     R++  H+KS+ H ++ K+ + L+ +     E   ++ D
Sbjct: 607 CTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVD 655


>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
           [Homo sapiens]
          Length = 837

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPD 445
           C +C+R     R++  H+KS+ H ++ K+ + L+ +     E   ++ D
Sbjct: 626 CTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVD 674


>gi|196115147 CDKN1A interacting zinc finger protein 1 isoform 1
           [Homo sapiens]
          Length = 898

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPD 445
           C +C+R     R++  H+KS+ H ++ K+ + L+ +     E   ++ D
Sbjct: 687 CTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVD 735


>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
           [Homo sapiens]
          Length = 842

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPD 445
           C +C+R     R++  H+KS+ H ++ K+ + L+ +     E   ++ D
Sbjct: 631 CTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVD 679


>gi|42544179 CDKN1A interacting zinc finger protein 1 isoform 1
           [Homo sapiens]
          Length = 898

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPD 445
           C +C+R     R++  H+KS+ H ++ K+ + L+ +     E   ++ D
Sbjct: 687 CTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHFITVD 735


>gi|109134347 NY-REN-58 antigen [Homo sapiens]
          Length = 701

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 151 KVELEKE--------DGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEF 202
           K ELE+E        DGL     + +   E    L     R++ R +Q  +E G      
Sbjct: 334 KSELERERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVV 393

Query: 203 LHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRR 262
           L  +  E     L    K      +W  +++   +E+L  R   M      +EL+    +
Sbjct: 394 LQDEKLELENR-LADLEKMKVEHDVWRQSEKDQYEEKL--RASQMAEEITRKELQSVRLK 450

Query: 263 YNQKNVS----ENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVT 318
             Q+ V+    E  ++    + Q I   +     + + +  L  SNQ+LK+ +E LKQ  
Sbjct: 451 LQQQIVTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQEC 510

Query: 319 KRY 321
           + +
Sbjct: 511 RNF 513


>gi|109134355 NY-REN-58 antigen [Homo sapiens]
          Length = 701

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 151 KVELEKE--------DGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEF 202
           K ELE+E        DGL     + +   E    L     R++ R +Q  +E G      
Sbjct: 334 KSELERERNKIQSELDGLQSDNEILKAAVEHHKVLLVEKDRELIRKVQAAKEEGYQKLVV 393

Query: 203 LHRQHTEEGGGPLGGPLKFSNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRR 262
           L  +  E     L    K      +W  +++   +E+L  R   M      +EL+    +
Sbjct: 394 LQDEKLELENR-LADLEKMKVEHDVWRQSEKDQYEEKL--RASQMAEEITRKELQSVRLK 450

Query: 263 YNQKNVS----ENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVT 318
             Q+ V+    E  ++    + Q I   +     + + +  L  SNQ+LK+ +E LKQ  
Sbjct: 451 LQQQIVTIENAEKEKNENSDLKQQISSLQIQVTSLAQSENDLLNSNQMLKEMVERLKQEC 510

Query: 319 KRY 321
           + +
Sbjct: 511 RNF 513


>gi|157364939 phosphodiesterase 6C [Homo sapiens]
          Length = 858

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 7/149 (4%)

Query: 259 FHRRYNQKNVSENSQDYQHGIFQSIGFKEFHEYLITEGKCTLETSNQLLKKGIEALKQVT 318
           F R+   + + E  ++ Q  +  S+ F E  +  + E    LE    + ++G    + V 
Sbjct: 24  FDRKLRVEVLGEIFKNSQVPVQSSMSFSELTQ--VEESALCLELLWTVQEEGGTPEQGVH 81

Query: 319 KRYARKQNRWVKNR---FLSRPGPIVPPVYG--LEVSDVSKWEESVLEPALEIVQSFIQG 373
           +   R  +    +R   FL R    +P V    L+V+  SK+E++++ P  E+V     G
Sbjct: 82  RALQRLAHLLQADRCSMFLCRSRNGIPEVASRLLDVTPTSKFEDNLVGPDKEVVFPLDIG 141

Query: 374 HKPTATPIKMPYNEAENKRSYHLCDLCDR 402
               A   K  +N  + K++ H  D  D+
Sbjct: 142 IVGWAAHTKKTHNVPDVKKNSHFSDFMDK 170


>gi|4758894 PET112-like [Homo sapiens]
          Length = 557

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 40/194 (20%)

Query: 112 RDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGTEKVIDRKVELEKEDGLVLHKRLSQ--- 168
           + ++PI V G      SL++ V    K  ++  + V  ++++LE++ G  LH  L     
Sbjct: 154 QQRLPIAVNG------SLIYGVCAGKKQSQVIPKTVRIKQIQLEQDSGKSLHDNLRSQTL 207

Query: 169 --------------VDPEMAAKLHPHDKRKVARSLQ-VFEETGISHSEFLHRQ------- 206
                         ++P+M+      +     R LQ + +  G S +     Q       
Sbjct: 208 IDLNRAGVGLLEVVLEPDMSC---GEEAATAVRELQLILQALGTSQANMAEGQLRVDANI 264

Query: 207 HTEEGGGPLGGPLKFSNPCILWLHADQAVLDERLDKRVDDMLAAG-LLEELRDFHRRYN- 264
                G PLG   +  N   +   A    +D  + ++++++   G +L E R FH +   
Sbjct: 265 SVHHPGEPLGVRTEVKNLNSIRFLA--KAIDYEIQRQINELENGGEILNETRSFHHKLGC 322

Query: 265 --QKNVSENSQDYQ 276
                  E  QDY+
Sbjct: 323 TMSMRDKEGKQDYR 336


>gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens]
          Length = 977

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 381 IKMPYNEAENKRSYHLCDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDA 433
           I+MP + A+    YH C LC +     ++W  HI+S+ H    +K    DSDA
Sbjct: 829 IQMPTDYADIMMGYH-CWLCGKNSNSKKQWQQHIQSEKH---KEKVFTSDSDA 877


>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
           [Homo sapiens]
          Length = 1585

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 131 WKVLVNTKPQEMGTEKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQ 190
           WK     K +   TE++++ ++EL+ E+ L + K L     +M+   HP       + ++
Sbjct: 509 WK---KPKDRTRTTEEMLEAELELKAEEELSIDKVLESEQDKMSQGFHPERDPSDLKKVK 565

Query: 191 VFEETG 196
             EE G
Sbjct: 566 AVEENG 571


>gi|153792148 threonine synthase-like 1 [Homo sapiens]
          Length = 743

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 8/58 (13%)

Query: 26  VVILGATGTGKSTLALQLGQRLGGEIVSAD--------SMQVYEGLDIITNKVSAQEQ 75
           ++++G  G GK+T+   +GQ+LG  ++  D        +M V E L  + N+   +E+
Sbjct: 58  IILMGPPGAGKTTVGRIIGQKLGCCVIDVDDDILEKTWNMSVSEKLQDVGNEQFLEEE 115


>gi|7706212 TAF9 RNA polymerase II, TATA box binding
          protein-associated factor isoform b [Homo sapiens]
          Length = 172

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 23 LPLVVILGATGTGKSTLALQLGQRLGGEIVSADSM----QVYEGLD 64
          LP +++ G  G GK+TL  +L  + G + ++   +    Q+Y+G D
Sbjct: 3  LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYD 48


>gi|6912440 zinc finger protein 346 [Homo sapiens]
          Length = 294

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 397 CDLCDRIIIGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSP 456
           C +C  ++I + +  AH +SK H N++K  R L    + T++ ++   D +++       
Sbjct: 75  CKVCCALLISESQKLAHYQSKKHANKVK--RYLAIHGMETLKGETKKLDSDQKSSRSKDK 132

Query: 457 GQ 458
            Q
Sbjct: 133 NQ 134


>gi|24430132 WW domain binding protein 2 [Homo sapiens]
          Length = 261

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 337 PGPIVPPVYGLEVSDVSKWEESVLEPALEIVQSFIQGHK---PTATPIKMPYNEAENKRS 393
           PGP+ PPV G +V      E    E A     +    H    PT+ P   PY   E+K++
Sbjct: 201 PGPMEPPVSGPDVPSTPAAEAKAAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDKKT 260


>gi|44681484 cell division cycle associated 2 [Homo sapiens]
          Length = 1023

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 20/182 (10%)

Query: 295 EGKCTLETSNQLLKKGIEALKQVTKRYARKQNRWVKN----RFLSRPGPIVPPVYGLEVS 350
           E KCT     + L K  + LK   K+  + +    K+    R ++   P++ P+   E+ 
Sbjct: 544 ETKCT----KRALPKKSQVLKSCRKKKGKGKKSVQKSLYGERDIASKKPLLSPIP--ELP 597

Query: 351 DVSKWEESVLEPALEIVQSFIQGHKPTATPIKMPYNEAENKR------SYHLCDLCDRII 404
           +V +   S+  P++  + S           +K P N  + K         H+    D+  
Sbjct: 598 EVPEMTPSI--PSIRRLGSGYFSSNGKLEEVKTPKNPVKRKDLLRHDPDLHMHQGYDKYD 655

Query: 405 IGDREWAAHIKSKSHLNQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELK 464
           +   E+ ++IKS S L         +++ +N  E++++    NK   E       D  + 
Sbjct: 656 VS--EFCSYIKSSSSLGNATSDEDPNTNIMNINENKNIPKAKNKSESENEPKAGTDSPVS 713

Query: 465 CS 466
           C+
Sbjct: 714 CA 715


>gi|28827813 NLR family, pyrin domain containing 14 [Homo sapiens]
          Length = 1093

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%)

Query: 384 PYNEAENKRSYHLCDLCDRIIIGDREWAAHIK--SKSHLNQLKKRRRLDSDAVNTIESQS 441
           P+NE +  R   L +L  +   G++ W+  +K   K +L  L +R +   + +N   +Q+
Sbjct: 46  PWNEVKKARREDLANLMKKYYPGEKAWSVSLKIFGKMNLKDLCERAK---EEINW-SAQT 101

Query: 442 VSPDHNKEPKEKGSPGQNDQE 462
           + PD       K    Q DQE
Sbjct: 102 IGPD-----DAKAGETQEDQE 117


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,900,919
Number of Sequences: 37866
Number of extensions: 784110
Number of successful extensions: 2777
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2742
Number of HSP's gapped (non-prelim): 62
length of query: 467
length of database: 18,247,518
effective HSP length: 106
effective length of query: 361
effective length of database: 14,233,722
effective search space: 5138373642
effective search space used: 5138373642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.