Guide to the Human Genome
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Name: THNSL1 Sequence: fasta or formatted (743aa) NCBI GI: 153792148
Description:

threonine synthase-like 1

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         55           2
 C cysteine            2.6         19           2
 D aspartate           5.2         39           3
 E glutamate           5.7         42           3
 F phenylalanine       5.1         38           2
 G glycine             6.1         45           2
 H histidine           3.4         25           2
 I isoleucine          6.7         50           2
 K lysine              6.6         49           2
 L leucine             9.4         70           2
 M methionine          2.3         17           2
 N asparagine          4.4         33           1
 P proline             3.5         26           2
 Q glutamine           4.7         35           2
 R arginine            3.8         28           2
 S serine              8.2         61           3
 T threonine           4.4         33           2
 V valine              6.6         49           2
 W tryptophan          1.2          9           1
 Y tyrosine            2.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   threonine synthase-like 1 
THNSL2                0.089   threonine synthase-like 2 
FIGNL1                0.008   fidgetin-like 1 
FIGNL1                0.008   fidgetin-like 1 
ATAD1                 0.008   ATPase family, AAA domain containing 1 
TAF9                  0.007   TAF9 RNA polymerase II, TATA box binding protein-asso...
PEX6                  0.006   peroxisomal biogenesis factor 6 
SPATA5                0.006   spermatogenesis associated 5 
FIGN                  0.006   fidgetin 
RFC1                  0.005   replication factor C large subunit 
CPO                   0.005   carboxypeptidase O 
KATNAL1               0.005   katanin p60 subunit A-like 1 
KATNAL1               0.005   katanin p60 subunit A-like 1 
PSMC2                 0.005   proteasome 26S ATPase subunit 2 
AKD1                  0.005   adenylate kinase domain containing 1 isoform 1 [Hom...
PSMC6                 0.005   proteasome 26S ATPase subunit 6 
CHTF18                0.005   CTF18, chromosome transmission fidelity factor 18 ho...
NSF                   0.005   vesicle-fusing ATPase 
LOC728806             0.005   PREDICTED: similar to N-ethylmaleimide-sensitive fa...
PSMC5                 0.005   proteasome 26S ATPase subunit 5 
N4BP2L2               0.005   phosphonoformate immuno-associated protein 5 isoform ...
LONP2                 0.005   peroxisomal LON protease-like 
DNAH6                 0.005   dynein, axonemal, heavy polypeptide 6 
WDR52                 0.005   WD repeat domain 52 
KATNA1                0.005   katanin p60 subunit A 1 
RAD54L2               0.005   RAD54-like 2 
SPATA5L1              0.004   spermatogenesis associated 5-like 1 
FIGNL2                0.004   fidgetin-like 2 
VCP                   0.004   valosin-containing protein 
RUVBL1                0.004   RuvB-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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