PDE6C 6137

Name: PDE6C	Sequence: fasta or formatted (858aa)		NCBI GI: 157364939
Description: phosphodiesterase 6C		Referenced in: Cyclic Nucleotides Photoreceptors and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 47 3 C cysteine 1.4 12 1 D aspartate 5.6 48 2 E glutamate 9.4 81 3 F phenylalanine 5.1 44 2 G glycine 4.5 39 3 H histidine 2.4 21 2 I isoleucine 5.5 47 2 K lysine 8.2 70 2 L leucine 9.2 79 2 M methionine 3.5 30 3 N asparagine 4.4 38 2 P proline 3.8 33 2 Q glutamine 4.2 36 3 R arginine 4.1 35 2 S serine 4.8 41 2 T threonine 5.9 51 1 V valine 7.5 64 2 W tryptophan 1.4 12 1 Y tyrosine 3.5 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphodiesterase 6C PDE6A 0.654 phosphodiesterase 6A PDE6B 0.653 phosphodiesterase 6B isoform 2 PDE6B 0.651 phosphodiesterase 6B isoform 1 PDE6B 0.476 phosphodiesterase 6B isoform 3 PDE11A 0.228 phosphodiesterase 11A isoform 4 PDE11A 0.212 phosphodiesterase 11A isoform 3 PDE5A 0.206 phosphodiesterase 5A isoform 1 PDE5A 0.206 phosphodiesterase 5A isoform 3 PDE5A 0.206 phosphodiesterase 5A isoform 2 PDE11A 0.190 phosphodiesterase 11A isoform 2 PDE11A 0.178 phosphodiesterase 11A isoform 1 PDE2A 0.137 phosphodiesterase 2A isoform 3 PDE2A 0.137 phosphodiesterase 2A isoform 2 PDE2A 0.137 phosphodiesterase 2A isoform 1 PDE10A 0.125 phosphodiesterase 10A isoform 2 PDE10A 0.125 phosphodiesterase 10A isoform 1 PDE4D 0.068 phosphodiesterase 4D isoform 1 PDE4D 0.068 phosphodiesterase 4D isoform 2 PDE4A 0.068 phosphodiesterase 4A isoform 3 PDE4A 0.068 phosphodiesterase 4A isoform 2 PDE4A 0.068 phosphodiesterase 4A isoform 1 PDE4A 0.068 phosphodiesterase 4A isoform 4 PDE9A 0.061 phosphodiesterase 9A isoform g PDE9A 0.061 phosphodiesterase 9A isoform g PDE9A 0.061 phosphodiesterase 9A isoform o PDE9A 0.061 phosphodiesterase 9A isoform n PDE9A 0.061 phosphodiesterase 9A isoform m PDE9A 0.061 phosphodiesterase 9A isoform j PDE9A 0.061 phosphodiesterase 9A isoform g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.