Guide to the Human Genome
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Name: GRP Sequence: fasta or formatted (148aa) NCBI GI: 31542860
Description:

gastrin-releasing peptide isoform 1 preproprotein

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [141aa] gastrin-releasing peptide isoform 2 preproprotein
alt prot [138aa] gastrin-releasing peptide isoform 3 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         10           2
 C cysteine            0.7          1           1
 D aspartate           2.0          3           1
 E glutamate           6.8         10           2
 F phenylalanine       0.7          1           1
 G glycine            11.5         17           3
 H histidine           2.0          3           1
 I isoleucine          1.4          2           1
 K lysine              6.1          9           2
 L leucine            12.2         18           2
 M methionine          2.0          3           1
 N asparagine          5.4          8           1
 P proline             7.4         11           2
 Q glutamine           6.8         10           2
 R arginine            8.8         13           1
 S serine              8.8         13           3
 T threonine           2.0          3           1
 V valine              5.4          8           1
 W tryptophan          2.0          3           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gastrin-releasing peptide isoform 1 preproprotein [H... 
GRP                   0.928   gastrin-releasing peptide isoform 2 preproprotein [H...
GRP                   0.809   gastrin-releasing peptide isoform 3 preproprotein [H...
NMB                   0.047   neuromedin B isoform 2 
NMB                   0.047   neuromedin B isoform 1 
TACC3                 0.036   transforming, acidic coiled-coil containing protein 3...
CEP72                 0.022   centrosomal protein 72 kDa 
IL20RA                0.022   interleukin 20 receptor, alpha 
RRS1                  0.018   homolog of yeast ribosome biogenesis regulatory prot...
FAM104A               0.018   hypothetical protein LOC84923 isoform 2 
RBM10                 0.018   RNA binding motif protein 10 isoform 1 
ATG9B                 0.018   ATG9 autophagy related 9 homolog B 
SEC16A                0.018   SEC16 homolog A 
RBM10                 0.018   RNA binding motif protein 10 isoform 2 
DCBLD1                0.018   discoidin, CUB and LCCL domain containing 1 
KIAA0649              0.014   1A6/DRIM (down-regulated in metastasis) interacting ...
MEPE                  0.011   matrix, extracellular phosphoglycoprotein with ASARM ...
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.011   poly(A) binding protein interacting protein 1 isofor...
HECTD1                0.011   HECT domain containing 1 
NOLC1                 0.011   nucleolar and coiled-body phosphoprotein 1 
ZNF174                0.011   zinc finger protein 174 isoform a 
CDGAP                 0.011   Cdc42 GTPase-activating protein 
LOC730183             0.011   PREDICTED: hypothetical protein 
FAM104A               0.011   hypothetical protein LOC84923 isoform 1 
PLD2                  0.007   phospholipase D2 
LOC100292370          0.007   PREDICTED: hypothetical protein 
LOC100291544          0.007   PREDICTED: hypothetical protein XP_002347761 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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