Guide to the Human Genome
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Name: GRP Sequence: fasta or formatted (138aa) NCBI GI: 60498999
Description:

gastrin-releasing peptide isoform 3 preproprotein

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [148aa] gastrin-releasing peptide isoform 1 preproprotein
alt prot [141aa] gastrin-releasing peptide isoform 2 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5          9           2
 C cysteine            0.7          1           1
 D aspartate           2.9          4           1
 E glutamate           7.2         10           2
 F phenylalanine       0.7          1           1
 G glycine             9.4         13           3
 H histidine           2.2          3           1
 I isoleucine          1.4          2           1
 K lysine              5.8          8           2
 L leucine            14.5         20           2
 M methionine          2.2          3           1
 N asparagine          5.1          7           1
 P proline             7.2         10           2
 Q glutamine           5.1          7           2
 R arginine            7.2         10           1
 S serine              8.7         12           3
 T threonine           2.9          4           1
 V valine              6.5          9           1
 W tryptophan          2.2          3           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gastrin-releasing peptide isoform 3 preproprotein [H... 
GRP                   0.879   gastrin-releasing peptide isoform 1 preproprotein [H...
GRP                   0.879   gastrin-releasing peptide isoform 2 preproprotein [H...
NMB                   0.051   neuromedin B isoform 2 
NMB                   0.051   neuromedin B isoform 1 
TACC3                 0.027   transforming, acidic coiled-coil containing protein 3...
IL20RA                0.023   interleukin 20 receptor, alpha 
ATG9B                 0.020   ATG9 autophagy related 9 homolog B 
SEC16A                0.020   SEC16 homolog A 
KIAA0649              0.016   1A6/DRIM (down-regulated in metastasis) interacting ...
LOC645139             0.012   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.012   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.012   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.012   poly(A) binding protein interacting protein 1 isofor...
HECTD1                0.012   HECT domain containing 1 
FAM104A               0.012   hypothetical protein LOC84923 isoform 2 
RBM10                 0.012   RNA binding motif protein 10 isoform 1 
LOC730183             0.012   PREDICTED: hypothetical protein 
RBM10                 0.012   RNA binding motif protein 10 isoform 2 
PLD2                  0.008   phospholipase D2 
CAMK2B                0.008   calcium/calmodulin-dependent protein kinase II beta ...
C11orf73              0.008   lethal, Chr 7, Rinchik 6 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
F11                   0.008   coagulation factor XI precursor 
KIAA1467              0.008   hypothetical protein LOC57613 
LOC643677             0.008   hypothetical protein LOC643677 
RHPN2                 0.008   rhophilin, Rho GTPase binding protein 2 
GTF2E1                0.008   general transcription factor IIE, polypeptide 1, al...
LOC643677             0.008   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.008   PREDICTED: hypothetical protein LOC643677 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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