Guide to the Human Genome
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Name: GRP Sequence: fasta or formatted (141aa) NCBI GI: 60498997
Description:

gastrin-releasing peptide isoform 2 preproprotein

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [148aa] gastrin-releasing peptide isoform 1 preproprotein
alt prot [138aa] gastrin-releasing peptide isoform 3 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4          9           2
 C cysteine            0.7          1           1
 D aspartate           2.1          3           1
 E glutamate           7.1         10           2
 F phenylalanine       0.7          1           1
 G glycine            11.3         16           3
 H histidine           2.1          3           1
 I isoleucine          1.4          2           1
 K lysine              6.4          9           2
 L leucine            12.1         17           2
 M methionine          2.1          3           1
 N asparagine          5.7          8           1
 P proline             7.1         10           2
 Q glutamine           7.1         10           2
 R arginine            8.5         12           1
 S serine              8.5         12           3
 T threonine           2.1          3           1
 V valine              5.0          7           1
 W tryptophan          2.1          3           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gastrin-releasing peptide isoform 2 preproprotein [H... 
GRP                   0.974   gastrin-releasing peptide isoform 1 preproprotein [H...
GRP                   0.849   gastrin-releasing peptide isoform 3 preproprotein [H...
NMB                   0.049   neuromedin B isoform 2 
NMB                   0.049   neuromedin B isoform 1 
TACC3                 0.045   transforming, acidic coiled-coil containing protein 3...
MEPE                  0.038   matrix, extracellular phosphoglycoprotein with ASARM ...
IL20RA                0.023   interleukin 20 receptor, alpha 
FAM104A               0.019   hypothetical protein LOC84923 isoform 2 
ATG9B                 0.019   ATG9 autophagy related 9 homolog B 
SEC16A                0.019   SEC16 homolog A 
KIAA0649              0.015   1A6/DRIM (down-regulated in metastasis) interacting ...
GAK                   0.015   cyclin G associated kinase 
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein inter...
LOC645139             0.011   PREDICTED: similar to poly(A) binding protein intera...
PAIP1                 0.011   poly(A) binding protein interacting protein 1 isofor...
HECTD1                0.011   HECT domain containing 1 
RBM10                 0.011   RNA binding motif protein 10 isoform 1 
NOLC1                 0.011   nucleolar and coiled-body phosphoprotein 1 
CDGAP                 0.011   Cdc42 GTPase-activating protein 
KIAA1468              0.011   hypothetical protein LOC57614 
LOC730183             0.011   PREDICTED: hypothetical protein 
RBM10                 0.011   RNA binding motif protein 10 isoform 2 
PLD2                  0.008   phospholipase D2 
CAMK2B                0.008   calcium/calmodulin-dependent protein kinase II beta ...
C11orf73              0.008   lethal, Chr 7, Rinchik 6 
F11                   0.008   coagulation factor XI precursor 
LOC643677             0.008   hypothetical protein LOC643677 
RHPN2                 0.008   rhophilin, Rho GTPase binding protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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