Guide to the Human Genome
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Name: MEPE Sequence: fasta or formatted (525aa) NCBI GI: 9910430
Description:

matrix, extracellular phosphoglycoprotein with ASARM motif (bone)

Referenced in:

Bone and Related Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         23           2
 C cysteine            0.4          2           1
 D aspartate           6.1         32           2
 E glutamate           8.4         44           2
 F phenylalanine       2.9         15           1
 G glycine             9.0         47           2
 H histidine           3.4         18           2
 I isoleucine          4.8         25           2
 K lysine              9.5         50           3
 L leucine             4.6         24           3
 M methionine          1.5          8           1
 N asparagine          8.0         42           2
 P proline             5.3         28           2
 Q glutamine           5.0         26           1
 R arginine            5.7         30           3
 S serine             10.9         57           3
 T threonine           4.6         24           1
 V valine              3.0         16           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   matrix, extracellular phosphoglycoprotein with ASARM ... 
DSPP                  0.027   dentin sialophosphoprotein preproprotein 
NKTR                  0.019   natural killer-tumor recognition sequence 
DMP1                  0.015   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
TCEAL6                0.014   transcription elongation factor A (SII)-like 6 [Hom...
FLG                   0.013   filaggrin 
RPGR                  0.013   retinitis pigmentosa GTPase regulator isoform C [Hom...
TGOLN2                0.013   trans-golgi network protein 2 
TCEAL5                0.013   transcription elongation factor A (SII)-like 5 [Homo...
THOC2                 0.013   THO complex 2 
CYLC1                 0.013   cylicin, basic protein of sperm head cytoskeleton 1...
PPP1R12B              0.012   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.012   protein phosphatase 1, regulatory (inhibitor) subunit...
TCEAL3                0.012   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL3                0.012   transcription elongation factor A (SII)-like 3 [Homo...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform b ...
MYOCD                 0.011   myocardin isoform 1 
MYOCD                 0.011   myocardin isoform 2 
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
MYOCD                 0.011   myocardin isoform 3 
TOPORS                0.011   topoisomerase I binding, arginine/serine-rich 
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform c ...
PRPF4B                0.011   serine/threonine-protein kinase PRP4K 
COL19A1               0.011   alpha 1 type XIX collagen precursor 
CWC22                 0.011   CWC22 spliceosome-associated protein homolog 
CASP8AP2              0.010   caspase 8 associated protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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