Guide to the Human Genome
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Name: PLD2 Sequence: fasta or formatted (933aa) NCBI GI: 156564407
Description:

phospholipase D2

Referenced in:

Acetylcholine
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         61           2
 C cysteine            1.5         14           2
 D aspartate           5.9         55           2
 E glutamate           5.7         53           2
 F phenylalanine       4.1         38           2
 G glycine             6.6         62           3
 H histidine           3.5         33           2
 I isoleucine          4.4         41           2
 K lysine              4.1         38           3
 L leucine            12.0        112           2
 M methionine          1.8         17           1
 N asparagine          2.5         23           1
 P proline             5.6         52           2
 Q glutamine           3.6         34           1
 R arginine            7.5         70           1
 S serine              7.0         65           2
 T threonine           6.0         56           2
 V valine              6.0         56           3
 W tryptophan          2.1         20           2
 Y tyrosine            3.5         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase D2 
PLD1                  0.277   phospholipase D1 isoform a 
PLD1                  0.276   phospholipase D1 isoform b 
NISCH                 0.008   nischarin 
PXK                   0.005   PX domain containing serine/threonine kinase 
ADAP1                 0.004   centaurin, alpha 1 
MYO10                 0.004   myosin X 
KIF16B                0.004   kinesin-like motor protein C20orf23 
WNK3                  0.003   WNK lysine deficient protein kinase 3 isoform 2 [Hom...
CHTF18                0.003   CTF18, chromosome transmission fidelity factor 18 ho...
WNK3                  0.003   WNK lysine deficient protein kinase 3 isoform 1 [Hom...
IKZF5                 0.003   zinc finger protein, subfamily 1A, 5 
ILDR1                 0.003   immunoglobulin-like domain containing receptor 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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