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Search of human proteins with 31317303
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31317303 heat shock 70kD protein 12B [Homo sapiens]
(686 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31317303 heat shock 70kD protein 12B [Homo sapiens] 1377 0.0
gi|119874213 heat shock 70kDa protein 12A [Homo sapiens] 855 0.0
gi|167466173 heat shock 70kDa protein 1B [Homo sapiens] 38 0.036
gi|194248072 heat shock 70kDa protein 1A [Homo sapiens] 38 0.036
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 37 0.079
gi|124256496 heat shock 70kDa protein 1-like [Homo sapiens] 36 0.10
gi|24234688 heat shock 70kDa protein 9 precursor [Homo sapiens] 36 0.14
gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 35 0.18
gi|156104876 fms-related tyrosine kinase 1 isoform 1 precursor [... 35 0.30
gi|13129104 coiled-coil domain containing 86 [Homo sapiens] 34 0.39
gi|34419635 heat shock 70kDa protein 6 (HSP70B') [Homo sapiens] 34 0.51
gi|54860079 nadrin isoform 1 [Homo sapiens] 34 0.51
gi|54860105 nadrin isoform 2 [Homo sapiens] 34 0.51
gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2 iso... 33 0.67
gi|110611228 utrophin [Homo sapiens] 33 0.67
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] 33 0.67
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 33 0.88
gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase... 33 1.1
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ... 31 3.3
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ... 31 3.3
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 31 3.3
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 31 3.3
gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens] 31 3.3
gi|218563700 ChaC, cation transport regulator-like 1 isoform b [... 31 4.4
gi|218563698 ChaC, cation transport regulator-like 1 isoform a [... 31 4.4
gi|24308227 zinc finger protein 687 [Homo sapiens] 31 4.4
gi|122937261 coiled-coil domain containing 85A [Homo sapiens] 31 4.4
gi|223671856 coiled-coil domain containing 85C [Homo sapiens] 30 5.7
gi|50345997 E1A binding protein p300 [Homo sapiens] 30 5.7
gi|119943102 CREB binding protein isoform b [Homo sapiens] 30 5.7
>gi|31317303 heat shock 70kD protein 12B [Homo sapiens]
Length = 686
Score = 1377 bits (3563), Expect = 0.0
Identities = 686/686 (100%), Positives = 686/686 (100%)
Query: 1 MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFS 60
MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFS
Sbjct: 1 MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFS 60
Query: 61 VVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGY 120
VVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGY
Sbjct: 61 VVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGY 120
Query: 121 TARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFF 180
TARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFF
Sbjct: 121 TARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFF 180
Query: 181 REHALQELREQSPSLPEKDTVRWVLTVPAIWKQPAKQFMREAAYLAGLVSRENAEQLLIA 240
REHALQELREQSPSLPEKDTVRWVLTVPAIWKQPAKQFMREAAYLAGLVSRENAEQLLIA
Sbjct: 181 REHALQELREQSPSLPEKDTVRWVLTVPAIWKQPAKQFMREAAYLAGLVSRENAEQLLIA 240
Query: 241 LEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVE 300
LEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVE
Sbjct: 241 LEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVE 300
Query: 301 SGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAF 360
SGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAF
Sbjct: 301 SGVGELWAEMQAGDRYVVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAF 360
Query: 361 EQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRK 420
EQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRK
Sbjct: 361 EQLLCRIFGEDFIATFKRQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRK 420
Query: 421 QRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGV 480
QRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGV
Sbjct: 421 QRGHNVETALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGV 480
Query: 481 KLLFLVGGFAESAVLQHAVQAALGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSP 540
KLLFLVGGFAESAVLQHAVQAALGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSP
Sbjct: 481 KLLFLVGGFAESAVLQHAVQAALGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSP 540
Query: 541 LTYGVGVLNRFVPGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPG 600
LTYGVGVLNRFVPGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPG
Sbjct: 541 LTYGVGVLNRFVPGRHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPG 600
Query: 601 QRRVLINLYCCAAEDARFITDPGVRKCGALSLELEPADCGQDTAGAPPGRREIRAAMQFG 660
QRRVLINLYCCAAEDARFITDPGVRKCGALSLELEPADCGQDTAGAPPGRREIRAAMQFG
Sbjct: 601 QRRVLINLYCCAAEDARFITDPGVRKCGALSLELEPADCGQDTAGAPPGRREIRAAMQFG 660
Query: 661 DTEIKVTAVDVSTNRSVRASIDFLSN 686
DTEIKVTAVDVSTNRSVRASIDFLSN
Sbjct: 661 DTEIKVTAVDVSTNRSVRASIDFLSN 686
>gi|119874213 heat shock 70kDa protein 12A [Homo sapiens]
Length = 675
Score = 855 bits (2210), Expect = 0.0
Identities = 421/669 (62%), Positives = 526/669 (78%), Gaps = 10/669 (1%)
Query: 19 ERSPVPSPPGSPRTQESCGIAPLTPSQSPKP-EVRAPQQASFSVVVAIDFGTTSSGYAFS 77
E +P + R+ GI PL+PS + +Q SF VVVA+DFGTTSSGYA+S
Sbjct: 14 ETAPTSAYSSPARSLGDTGITPLSPSHIVNDTDSNVSEQQSFLVVVAVDFGTTSSGYAYS 73
Query: 78 FASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDW 137
F +PE IH+MR+WEGGDPGV++QKTPT +LLTPE FHSFGY ARD+YHDLDP EA+ W
Sbjct: 74 FTKEPECIHVMRRWEGGDPGVSNQKTPTTILLTPERKFHSFGYAARDFYHDLDPNEAKQW 133
Query: 138 LYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFFREHALQELREQSPSLPE 197
LY EKFKMK+H+ DLT+ T L A NGK + ALE+FA+AL++F+E AL+EL +Q+ S E
Sbjct: 134 LYLEKFKMKLHTTGDLTMDTDLTAANGKKVKALEIFAYALQYFKEQALKELSDQAGSEFE 193
Query: 198 KDTVRWVLTVPAIWKQPAKQFMREAAYLAGLVSRENAEQLLIALEPEAASVYCRKLRLHQ 257
VRWV+TVPAIWKQPAKQFMR+AAY AGL S EN+EQL+IALEPEAAS+YCRKLRLHQ
Sbjct: 194 NSDVRWVITVPAIWKQPAKQFMRQAAYQAGLASPENSEQLIIALEPEAASIYCRKLRLHQ 253
Query: 258 LLDLSGRAPGGGRLGERRSIDSSFRQAREQLRRSRHSRTFLVESGVGELWAEMQAGDRYV 317
+++LS +A G G ++ + F QA+E +RR+R SRTFLVE+ +GE+W+E++ GD+YV
Sbjct: 254 MIELSSKAAVNGYSGS-DTVGAGFTQAKEHIRRNRQSRTFLVENVIGEIWSELEEGDKYV 312
Query: 318 VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFK 377
V D GGGTVDLTVHQ+ P G LKELYKA+GGPYG++GVD FE+LL +IFGEDFI FK
Sbjct: 313 VVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLYKIFGEDFIEQFK 372
Query: 378 RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNF 437
+RPAAWVDL IAFE+RKR A P R LNI+LPFSFID+Y+K RGH+VE ALR+S+V+F
Sbjct: 373 IKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNVDF 432
Query: 438 VKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGVKLLFLVGGFAESAVLQH 497
VKWSSQGMLRMS +AMN LF+PT+ II+H+ L +PEV VK LFLVGGFAE+ +LQ
Sbjct: 433 VKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGGFAEAPLLQQ 492
Query: 498 AVQAALGARGLRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVLNRFVPGRHP 557
AVQAA G + R+++P DVGLTILKGAVLFG P V++VRRSPLTYGVGVLNR+V G+HP
Sbjct: 493 AVQAAFGDQ-CRIIIPQDVGLTILKGAVLFGLDPAVIKVRRSPLTYGVGVLNRYVEGKHP 551
Query: 558 PEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDAR 617
PEKLLV+DG RWCTDVF++F++A+QSVALGE V+RSY PA+P Q ++IN+Y ++
Sbjct: 552 PEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIVINIYSSEHDNVS 611
Query: 618 FITDPGVRKCGALSLELEPADCGQDTAG-APPGRREIRAAMQFGDTEIKVTAVDVSTNRS 676
FITDPGV+KCG L L+L T+G A P RREI+ MQFGDTEIK TA+D++T++S
Sbjct: 612 FITDPGVKKCGTLRLDL------TGTSGTAVPARREIQTLMQFGDTEIKATAIDIATSKS 665
Query: 677 VRASIDFLS 685
V+ IDFL+
Sbjct: 666 VKVGIDFLN 674
>gi|167466173 heat shock 70kDa protein 1B [Homo sapiens]
Length = 641
Score = 37.7 bits (86), Expect = 0.036
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 40/224 (17%)
Query: 313 GDRYV-VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGED 371
G+R V + D GGGT D+++ ++ G + KA+ G G D F+ L F E+
Sbjct: 191 GERNVLIFDLGGGTFDVSILTIDD--GIFE--VKATAGDTHLGGED--FDNRLVNHFVEE 244
Query: 372 FIATFKR---QRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVET 428
F K+ Q A L A E KRT +L I F IDFY T
Sbjct: 245 FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFY---------T 295
Query: 429 ALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHI-EALLARPEVQGVKLLFLVG 487
++ R+ E ++LF+ T+ + + + +A L + ++ L LVG
Sbjct: 296 SITRARFE--------------ELCSDLFRSTLEPVEKALRDAKLDKAQIHD---LVLVG 338
Query: 488 GFAESAVLQHAVQAALGARGLRVVVPHDVGL---TILKGAVLFG 528
G +Q +Q R L + D + ++ A+L G
Sbjct: 339 GSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>gi|194248072 heat shock 70kDa protein 1A [Homo sapiens]
Length = 641
Score = 37.7 bits (86), Expect = 0.036
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 40/224 (17%)
Query: 313 GDRYV-VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGED 371
G+R V + D GGGT D+++ ++ G + KA+ G G D F+ L F E+
Sbjct: 191 GERNVLIFDLGGGTFDVSILTIDD--GIFE--VKATAGDTHLGGED--FDNRLVNHFVEE 244
Query: 372 FIATFKR---QRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVET 428
F K+ Q A L A E KRT +L I F IDFY T
Sbjct: 245 FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFY---------T 295
Query: 429 ALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHI-EALLARPEVQGVKLLFLVG 487
++ R+ E ++LF+ T+ + + + +A L + ++ L LVG
Sbjct: 296 SITRARFE--------------ELCSDLFRSTLEPVEKALRDAKLDKAQIHD---LVLVG 338
Query: 488 GFAESAVLQHAVQAALGARGLRVVVPHDVGL---TILKGAVLFG 528
G +Q +Q R L + D + ++ A+L G
Sbjct: 339 GSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 36.6 bits (83), Expect = 0.079
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 19 ERSPVP---SPPGSPRTQESCGIAPLTPSQSPKPE-----VRAPQQASFSVVVA-IDFGT 69
ERSP P +PP PRT+++ AP + +P P +A QA SV V+ +
Sbjct: 774 ERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSPMSPQD 833
Query: 70 TSSGYAFSFASDPEAIHMMRKWEGG---DPGVAHQKTPTCLLLTPEGA 114
+ G AFSF + P A + + G G A ++ +TP+ A
Sbjct: 834 GAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAA 881
>gi|124256496 heat shock 70kDa protein 1-like [Homo sapiens]
Length = 641
Score = 36.2 bits (82), Expect = 0.10
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 42/225 (18%)
Query: 313 GDRYV-VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGED 371
G+R+V + D GGGT D+++ ++ G + KA+ G G D F+ L F E+
Sbjct: 193 GERHVLIFDLGGGTFDVSILTIDD--GIFE--VKATAGDTHLGGED--FDNRLVSHFVEE 246
Query: 372 FIATFKR---QRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVET 428
F K+ Q A L A E KRT L I + IDFY T
Sbjct: 247 FKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSLYEGIDFY---------T 297
Query: 429 ALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALLARPEVQGVKL--LFLV 486
++ R+ EL G ++ +E L ++ K+ + LV
Sbjct: 298 SITRA------------------RFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLV 339
Query: 487 GGFAESAVLQHAVQAALGARGLRVVVPHDVGL---TILKGAVLFG 528
GG +Q +Q R L + D + ++ A+L G
Sbjct: 340 GGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMG 384
>gi|24234688 heat shock 70kDa protein 9 precursor [Homo sapiens]
Length = 679
Score = 35.8 bits (81), Expect = 0.14
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 40/240 (16%)
Query: 318 VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFK 377
V D GGGT D+++ LE G + K++ G G D F+Q L R + FK
Sbjct: 242 VYDLGGGTFDISI--LEIQKGVFE--VKSTNGDTFLGGED--FDQALLR----HIVKEFK 291
Query: 378 RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNF 437
R+ VDLT A +R +S +V+T + ++ +
Sbjct: 292 RE---TGVDLTKDNMALQRVREAAEKAKCELS--------------SSVQTDI---NLPY 331
Query: 438 VKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEALL------ARPEVQGVKLLFLVGGFAE 491
+ S G ++ + F+ V+ +I+ A A + + LVGG
Sbjct: 332 LTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTR 391
Query: 492 SAVLQHAVQAALGARGLRVVVPHD---VGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVL 548
+Q VQ G + V P + +G I +G VL G V+ + +PL+ G+ L
Sbjct: 392 MPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAI-QGGVLAGDVTDVLLLDVTPLSLGIETL 450
>gi|34447231 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform a [Homo sapiens]
Length = 614
Score = 35.4 bits (80), Expect = 0.18
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 25/128 (19%)
Query: 179 FFREHALQELREQSPSLPE----KDTVRWVLTVPAIWKQPAKQFMREAAYLA-------- 226
F E+ L +R ++ +LP K ++WV + W P K FMRE YL
Sbjct: 228 FVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLL 287
Query: 227 --GLVSRENAEQLLIALEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDSSFRQA 284
G+++ L ++ E + C K L A GG R+ R D+ F +
Sbjct: 288 DDGVINMSIPIVLPVSAEDKTRLEGCSKFVL---------AHGGRRVAILR--DAEFYEH 336
Query: 285 REQLRRSR 292
R++ R SR
Sbjct: 337 RKEERCSR 344
>gi|156104876 fms-related tyrosine kinase 1 isoform 1 precursor
[Homo sapiens]
Length = 1338
Score = 34.7 bits (78), Expect = 0.30
Identities = 21/69 (30%), Positives = 31/69 (44%)
Query: 78 FASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDW 137
F + A+HM K E +PG+ K P +T +F S G+ D++ EE D
Sbjct: 929 FLNKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDG 988
Query: 138 LYFEKFKMK 146
Y E M+
Sbjct: 989 FYKEPITME 997
>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
Length = 360
Score = 34.3 bits (77), Expect = 0.39
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 17 SPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQ 56
SPER P SP GSPR Q+ G+ +P P+P +PQ+
Sbjct: 58 SPERPPKTSP-GSPRLQQGAGLE--SPQGQPEPGAASPQR 94
>gi|34419635 heat shock 70kDa protein 6 (HSP70B') [Homo sapiens]
Length = 643
Score = 33.9 bits (76), Expect = 0.51
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 40/225 (17%)
Query: 312 AGDRYV-VADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGE 370
AG+R V + D GGGT D++V ++ G + KA+ G G D F+ L F E
Sbjct: 192 AGERNVLIFDLGGGTFDVSVLSIDA--GVFE--VKATAGDTHLGGED--FDNRLVNHFME 245
Query: 371 DFIATFKRQ---RPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVE 427
+F + A L A E KRT L I F +DFY
Sbjct: 246 EFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFY--------- 296
Query: 428 TALRRSSVNFVKWSSQGMLRMSCEAMNELFQPTVSGIIQHI-EALLARPEVQGVKLLFLV 486
T++ R+ E ++LF+ T+ + + + +A L + ++ V LV
Sbjct: 297 TSITRARFE--------------ELCSDLFRSTLEPVEKALRDAKLDKAQIHDV---VLV 339
Query: 487 GGFAESAVLQHAVQAALGARGLRVVVPHDVGL---TILKGAVLFG 528
GG +Q +Q + L + D + ++ AVL G
Sbjct: 340 GGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMG 384
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 33.9 bits (76), Expect = 0.51
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 22 PVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAP 54
P PPG P Q S G + PS SPKP R+P
Sbjct: 643 PGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSP 675
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 33.9 bits (76), Expect = 0.51
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 22 PVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAP 54
P PPG P Q S G + PS SPKP R+P
Sbjct: 565 PGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSP 597
>gi|62912492 3'-phosphoadenosine 5'-phosphosulfate synthase 2
isoform b [Homo sapiens]
Length = 619
Score = 33.5 bits (75), Expect = 0.67
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 30/133 (22%)
Query: 179 FFREHALQELREQSPSLPE----KDTVRWVLTVPAIWKQPAKQFMREAAYLA-------- 226
F E+ L +R ++ +LP K ++WV + W P K FMRE YL
Sbjct: 228 FVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLL 287
Query: 227 -------GLVSRENAEQLLIALEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERRSIDS 279
G+++ L ++ E + C K L A GG R+ R D+
Sbjct: 288 DGMALPDGVINMSIPIVLPVSAEDKTRLEGCSKFVL---------AHGGRRVAILR--DA 336
Query: 280 SFRQAREQLRRSR 292
F + R++ R SR
Sbjct: 337 EFYEHRKEERCSR 349
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 33.5 bits (75), Expect = 0.67
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 125 YYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFFREHA 184
Y H LD E WL + M+ S T+L L+ + T +EV A L++
Sbjct: 2089 YRHQLD--EIICWLTKAEHAMQKRSTTELG--ENLQELRDLTQE-MEVHAEKLKWLNRTE 2143
Query: 185 LQELREQSPSLPEKDTVRWVL-TVPAIWKQPAKQ 217
L+ L ++S SLPE+D + L TV W + ++
Sbjct: 2144 LEMLSDKSLSLPERDKISESLRTVNMTWNKICRE 2177
>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
Length = 600
Score = 33.5 bits (75), Expect = 0.67
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 1 MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKP 49
+L VP+ G SP+ SP PSP SP+ G AP P P P
Sbjct: 495 LLEVPKAGAVAK---GSPKPSPQPSPKPSPKNSPKKGGAPAAPPPPPPP 540
>gi|153791535 general control of amino acid synthesis 5-like 2
[Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.88
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 16 SSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKP---EVRAPQQASFSVVVAIDFGTTSS 72
+ P ++P P+P PR +S AP TP+ +P P + P A A G+T +
Sbjct: 2 AEPSQAPTPAPAAQPRPLQSPAPAP-TPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGT 60
Query: 73 G 73
G
Sbjct: 61 G 61
>gi|4505353 heparan glucosaminyl N-deacetylase/N-sulfotransferase
2 [Homo sapiens]
Length = 883
Score = 32.7 bits (73), Expect = 1.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 7 MGLQGLYIGSSPE-RSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFSVVVAI 65
MG Y+ +SP+ + P+P P G + + G P P P+P R P+ A VV +
Sbjct: 31 MGFLAYYVSTSPKAKEPLPLPLGDCSSGGAAGPGPARPPVPPRPP-RPPETARTEPVVLV 89
>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
sapiens]
Length = 1723
Score = 31.2 bits (69), Expect = 3.3
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 22 PVPSPPGSPRTQESC---GIAPLTPSQSPKPEVRAPQQASFSVVVAIDFGTTSSGYAFSF 78
P P PPG+ R S G P TP P S S + ID GT++ G S+
Sbjct: 843 PPPPPPGNVRPSNSSWSSGPQPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSY 902
Query: 79 ASDPEAIHMMRKWEGGDPGVAHQKTPT 105
+ + +++ K G P PT
Sbjct: 903 --NYKNVNLWDKNSQGGPAPREPNLPT 927
>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
sapiens]
Length = 1833
Score = 31.2 bits (69), Expect = 3.3
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 22 PVPSPPGSPRTQESC---GIAPLTPSQSPKPEVRAPQQASFSVVVAIDFGTTSSGYAFSF 78
P P PPG+ R S G P TP P S S + ID GT++ G S+
Sbjct: 843 PPPPPPGNVRPSNSSWSSGPQPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSY 902
Query: 79 ASDPEAIHMMRKWEGGDPGVAHQKTPT 105
+ + +++ K G P PT
Sbjct: 903 --NYKNVNLWDKNSQGGPAPREPNLPT 927
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 31.2 bits (69), Expect = 3.3
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 18 PERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEV----RAPQ--QASFSVVVAIDFGTTS 71
P + P P+P +P S AP P P+P P+ +++FS +I GT S
Sbjct: 386 PAKVP-PTPSLAPAPLASVPSAPSAPGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVS 444
Query: 72 S---GYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHD 128
+ G + E +++ +K+ G H C G H Y R++YH
Sbjct: 445 TVKNGLPTDKPAVTEDVNIYQKYIARFSGSQH-----C------GHIHC-AYQYREHYHC 492
Query: 129 LDPE 132
LDPE
Sbjct: 493 LDPE 496
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 31.2 bits (69), Expect = 3.3
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 22/124 (17%)
Query: 18 PERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEV----RAPQ--QASFSVVVAIDFGTTS 71
P + P P+P +P S AP P P+P P+ +++FS +I GT S
Sbjct: 386 PAKVP-PTPSLAPAPLASVPSAPSAPGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVS 444
Query: 72 S---GYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHD 128
+ G + E +++ +K+ G H C G H Y R++YH
Sbjct: 445 TVKNGLPTDKPAVTEDVNIYQKYIARFSGSQH-----C------GHIHC-AYQYREHYHC 492
Query: 129 LDPE 132
LDPE
Sbjct: 493 LDPE 496
>gi|114431244 von Willebrand factor C and EGF domains [Homo sapiens]
Length = 955
Score = 31.2 bits (69), Expect = 3.3
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 1 MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEV 51
+L +PE G L G SP S P PP RT P P+ SP V
Sbjct: 285 LLLLPEAGRPALSPGHSPP-SGAPGPPAGVRTTRLPSPTPRLPTSSPSAPV 334
>gi|218563700 ChaC, cation transport regulator-like 1 isoform b
[Homo sapiens]
Length = 219
Score = 30.8 bits (68), Expect = 4.4
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 13 YIGSSPERSPVPSPPGSPRTQESCGIAPLTP--SQSPKPEVRAPQ 55
+ G P R P P P QES AP TP SQSP P + P+
Sbjct: 25 HAGDQPRRPPGPIPVPGTMKQESA--APNTPPTSQSPTPSAQFPR 67
>gi|218563698 ChaC, cation transport regulator-like 1 isoform a
[Homo sapiens]
Length = 264
Score = 30.8 bits (68), Expect = 4.4
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 13 YIGSSPERSPVPSPPGSPRTQESCGIAPLTP--SQSPKPEVRAPQ 55
+ G P R P P P QES AP TP SQSP P + P+
Sbjct: 25 HAGDQPRRPPGPIPVPGTMKQESA--APNTPPTSQSPTPSAQFPR 67
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 30.8 bits (68), Expect = 4.4
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Query: 22 PVPSPPGSPRTQESCG------IAPLTPSQSPKPEVRAPQQASFSVVVAIDFGTTSSGYA 75
PV SPP QESC +A SPK P AS V + F S G+
Sbjct: 212 PVSSPPLGALKQESCSPHHPQVLAQQGSGSSPK-ATDIPASASPPPVAGVPFFKQSPGHQ 270
Query: 76 FSFASDPEAIHMMRKWEGGDPGVAHQKTP 104
AS + K E D G + +P
Sbjct: 271 SPLASPKVPVCQPLKEEDDDEGPVDKSSP 299
>gi|122937261 coiled-coil domain containing 85A [Homo sapiens]
Length = 553
Score = 30.8 bits (68), Expect = 4.4
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 212 KQPAKQFMREAAYLAGLVSRENAEQL--LIALEPEAASVYCRKLRLHQLLDLSGRAPGGG 269
K+ ++++ R Y AG++ +E A L L LE + V + L +L L G G
Sbjct: 120 KRVSREWQRLGRYTAGVMHKEVALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEKGAG 179
Query: 270 RLGERRSIDS 279
G R SIDS
Sbjct: 180 CAGSRCSIDS 189
>gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
Length = 419
Score = 30.4 bits (67), Expect = 5.7
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 209 AIWKQPAK--QFMREAAYLAGLVSRENAE--QLLIALEPEAASVYCRKLRLHQLLDLSGR 264
A+W + A+ Q +RE + REN E +L++ L+ E A++ SG
Sbjct: 115 AVWHEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAA-------SGG 167
Query: 265 APGGGRLGERRSIDS 279
GGG G R SIDS
Sbjct: 168 GGGGGGAGSRSSIDS 182
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 30.4 bits (67), Expect = 5.7
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 19/95 (20%)
Query: 21 SPVPSPPGSPRTQESCGIAPLTPSQSP-KPEVRAPQQASFSVVVAIDFGTTSSGYAFSFA 79
+PVP+PP P +S + P P Q+P P + PQQ S+ A
Sbjct: 861 APVPTPPAMPPGPQSQALHP-PPRQTPTPPTTQLPQQVQPSLPAA--------------- 904
Query: 80 SDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGA 114
P A ++ A TPT LL P+ A
Sbjct: 905 --PSADQPQQQPRSQQSTAASVPTPTAPLLPPQPA 937
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 30.4 bits (67), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 21 SPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFSVVVAIDFGTTSS 72
SP +PPG+P Q S P P+Q P+P + A F V TT S
Sbjct: 1846 SPTSAPPGTPTQQPSTPQTPQPPAQ-PQPSPVSMSPAGFPSVARTQPPTTVS 1896
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,632,689
Number of Sequences: 37866
Number of extensions: 1410423
Number of successful extensions: 5607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5535
Number of HSP's gapped (non-prelim): 124
length of query: 686
length of database: 18,247,518
effective HSP length: 109
effective length of query: 577
effective length of database: 14,120,124
effective search space: 8147311548
effective search space used: 8147311548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.