Guide to the Human Genome
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Name: HSPA1L Sequence: fasta or formatted (641aa) NCBI GI: 124256496
Description:

heat shock 70kDa protein 1-like

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         55           3
 C cysteine            1.1          7           1
 D aspartate           7.0         45           2
 E glutamate           7.0         45           2
 F phenylalanine       3.6         23           1
 G glycine             8.1         52           3
 H histidine           1.2          8           1
 I isoleucine          6.9         44           2
 K lysine              8.0         51           2
 L leucine             8.3         53           4
 M methionine          1.7         11           1
 N asparagine          5.0         32           2
 P proline             3.7         24           2
 Q glutamine           3.7         24           1
 R arginine            4.8         31           2
 S serine              4.4         28           3
 T threonine           7.0         45           2
 V valine              7.0         45           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock 70kDa protein 1-like 
HSPA1B                0.890   heat shock 70kDa protein 1B 
HSPA1A                0.890   heat shock 70kDa protein 1A 
HSPA8                 0.840   heat shock 70kDa protein 8 isoform 1 
HSPA2                 0.826   heat shock 70kDa protein 2 
HSPA6                 0.817   heat shock 70kDa protein 6 (HSP70B') 
HSPA8                 0.637   heat shock 70kDa protein 8 isoform 2 
HSPA5                 0.610   heat shock 70kDa protein 5 
HSPA9                 0.433   heat shock 70kDa protein 9 precursor 
HSPA14                0.233   heat shock 70kDa protein 14 isoform 1 
HSPA4                 0.216   heat shock 70kDa protein 4 
HSPA13                0.205   heat shock protein 70kDa family member 13 precursor ...
HSPA4L                0.204   heat shock 70kDa protein 4-like 
HSPH1                 0.201   heat shock 105kD 
HYOU1                 0.156   hypoxia up-regulated 1 precursor 
HYOU1                 0.156   hypoxia up-regulated 1 precursor 
ANKRD45               0.018   ankyrin repeat domain 45 
KIF15                 0.011   kinesin family member 15 
GSG1                  0.010   germ cell associated 1 isoform 4 
GSG1                  0.010   germ cell associated 1 isoform 2 
HSPA12B               0.009   heat shock 70kD protein 12B 
CENPF                 0.009   centromere protein F 
GOLGB1                0.008   golgi autoantigen, golgin subfamily b, macrogolgin ...
FLNA                  0.006   filamin A, alpha isoform 2 
FLNA                  0.006   filamin A, alpha isoform 1 
LOC202051             0.006   hypothetical protein LOC202051 
KRT3                  0.006   keratin 3 
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 1 
JAK1                  0.006   janus kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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