HM13 25280

Name: HM13	Sequence: fasta or formatted (426aa)		NCBI GI: 30581111
Description: minor histocompatibility antigen 13 isoform 3		Referenced in: Aspartic Proteases ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [377aa] minor histocompatibility antigen 13 isoform 1 alt prot [394aa] minor histocompatibility antigen 13 isoform 2 alt prot [143aa] minor histocompatibility antigen 13 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 37 2 C cysteine 1.2 5 1 D aspartate 2.8 12 1 E glutamate 5.4 23 2 F phenylalanine 7.5 32 2 G glycine 7.3 31 2 H histidine 2.1 9 1 I isoleucine 6.3 27 2 K lysine 4.7 20 2 L leucine 13.1 56 3 M methionine 2.3 10 1 N asparagine 4.5 19 2 P proline 6.1 26 2 Q glutamine 2.1 9 2 R arginine 3.3 14 4 S serine 8.2 35 2 T threonine 5.4 23 2 V valine 4.9 21 2 W tryptophan 0.7 3 1 Y tyrosine 3.3 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 minor histocompatibility antigen 13 isoform 3 HM13 0.924 minor histocompatibility antigen 13 isoform 2 HM13 0.851 minor histocompatibility antigen 13 isoform 1 HM13 0.261 minor histocompatibility antigen 13 isoform 4 SPPL3 0.103 signal peptide peptidase 3 SPPL2A 0.091 signal peptide peptidase-like 2A SPPL2B 0.083 signal peptide peptidase-like 2B isoform 2 SPPL2B 0.074 signal peptide peptidase-like 2B isoform 3 IMP5 0.055 intramembrane protease 5 PSEN2 0.010 presenilin 2 isoform 2 PSEN2 0.010 presenilin 2 isoform 1 PSEN1 0.008 presenilin 1 isoform I-467 PSEN1 0.008 presenilin 1 isoform I-463 BSN 0.008 bassoon protein VAX1 0.007 ventral anterior homeobox 1 isoform a MTOR 0.007 FK506 binding protein 12-rapamycin associated protein... SLC5A11 0.007 solute carrier family 5 (sodium/glucose cotransporte... KIAA0355 0.007 hypothetical protein LOC9710 TMEM201 0.006 transmembrane protein 201 isoform 1 BOD1L 0.006 biorientation of chromosomes in cell division 1-like... PRRT2 0.006 proline-rich transmembrane protein 2 SHROOM3 0.006 shroom family member 3 protein RAPGEF5 0.005 Rap guanine nucleotide exchange factor (GEF) 5 [Hom... PHIP 0.005 pleckstrin homology domain interacting protein [Homo... JPH2 0.005 junctophilin 2 isoform 1 ARHGEF5 0.005 rho guanine nucleotide exchange factor 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.