PSEN1 29238

Name: PSEN1	Sequence: fasta or formatted (467aa)		NCBI GI: 4506163
Description: presenilin 1 isoform I-467		Referenced in: Aspartic Proteases Notch Pathway
Other entries for this name: alt prot [463aa] presenilin 1 isoform I-463
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 36 2 C cysteine 1.1 5 1 D aspartate 4.1 19 2 E glutamate 6.9 32 3 F phenylalanine 4.9 23 3 G glycine 4.9 23 2 H histidine 2.1 10 1 I isoleucine 6.6 31 2 K lysine 3.4 16 2 L leucine 12.0 56 4 M methionine 2.8 13 1 N asparagine 3.6 17 1 P proline 4.1 19 1 Q glutamine 4.1 19 2 R arginine 4.3 20 2 S serine 7.3 34 3 T threonine 5.6 26 2 V valine 8.8 41 4 W tryptophan 1.7 8 1 Y tyrosine 4.1 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 presenilin 1 isoform I-467 PSEN1 0.986 presenilin 1 isoform I-463 PSEN2 0.592 presenilin 2 isoform 1 PSEN2 0.589 presenilin 2 isoform 2 CD47 0.019 CD47 antigen isoform 3 precursor CD47 0.019 CD47 antigen isoform 2 precursor CD47 0.019 CD47 antigen isoform 1 precursor PPP4R1 0.010 protein phosphatase 4, regulatory subunit 1 isoform b... PPP4R1 0.010 protein phosphatase 4, regulatory subunit 1 isoform... HM13 0.008 minor histocompatibility antigen 13 isoform 3 HM13 0.008 minor histocompatibility antigen 13 isoform 2 HM13 0.008 minor histocompatibility antigen 13 isoform 1 ABCC8 0.008 ATP-binding cassette, sub-family C, member 8 COQ9 0.007 coenzyme Q9 homolog CHGA 0.007 chromogranin A precursor ZEB1 0.007 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.007 zinc finger E-box binding homeobox 1 isoform b [Hom... SETD2 0.007 SET domain containing 2 ATP11A 0.007 ATPase, class VI, type 11A isoform a SPPL2A 0.007 signal peptide peptidase-like 2A SLC44A1 0.007 CDW92 antigen GPR89A 0.006 G protein-coupled receptor 89A isoform 1 GPR89B 0.006 G protein-coupled receptor 89B CCDC11 0.006 coiled-coil domain containing 11 ZNF219 0.006 zinc finger protein 219 ZNF219 0.006 zinc finger protein 219 OR13J1 0.006 olfactory receptor, family 13, subfamily J, member 1... ZNF219 0.006 zinc finger protein 219 GPR151 0.006 G protein-coupled receptor 151 USH1C 0.006 harmonin isoform b3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.