HM13 15883

Name: HM13	Sequence: fasta or formatted (377aa)		NCBI GI: 23308607
Description: minor histocompatibility antigen 13 isoform 1		Referenced in: Aspartic Proteases ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [394aa] minor histocompatibility antigen 13 isoform 2 alt prot [426aa] minor histocompatibility antigen 13 isoform 3 alt prot [143aa] minor histocompatibility antigen 13 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 32 2 C cysteine 1.3 5 1 D aspartate 2.9 11 1 E glutamate 5.6 21 2 F phenylalanine 8.2 31 2 G glycine 7.7 29 2 H histidine 1.9 7 1 I isoleucine 6.6 25 2 K lysine 5.0 19 2 L leucine 13.8 52 3 M methionine 2.4 9 1 N asparagine 4.8 18 2 P proline 5.0 19 2 Q glutamine 1.6 6 1 R arginine 2.4 9 1 S serine 7.4 28 2 T threonine 5.3 20 2 V valine 5.3 20 2 W tryptophan 0.8 3 1 Y tyrosine 3.4 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 minor histocompatibility antigen 13 isoform 1 HM13 0.968 minor histocompatibility antigen 13 isoform 3 HM13 0.924 minor histocompatibility antigen 13 isoform 2 HM13 0.296 minor histocompatibility antigen 13 isoform 4 SPPL3 0.117 signal peptide peptidase 3 SPPL2A 0.102 signal peptide peptidase-like 2A SPPL2B 0.084 signal peptide peptidase-like 2B isoform 3 SPPL2B 0.084 signal peptide peptidase-like 2B isoform 2 IMP5 0.061 intramembrane protease 5 PSEN2 0.011 presenilin 2 isoform 2 PSEN2 0.011 presenilin 2 isoform 1 PSEN1 0.010 presenilin 1 isoform I-467 PSEN1 0.010 presenilin 1 isoform I-463 MTOR 0.008 FK506 binding protein 12-rapamycin associated protein... SLC5A11 0.008 solute carrier family 5 (sodium/glucose cotransporte... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.