PSEN2 5838

Name: PSEN2	Sequence: fasta or formatted (447aa)		NCBI GI: 156105681
Description: presenilin 2 isoform 2		Referenced in: Aspartic Proteases Notch Pathway
Other entries for this name: alt prot [448aa] presenilin 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 27 3 C cysteine 2.0 9 1 D aspartate 3.8 17 1 E glutamate 7.8 35 5 F phenylalanine 4.7 21 1 G glycine 6.7 30 1 H histidine 0.9 4 1 I isoleucine 5.8 26 1 K lysine 3.4 15 2 L leucine 13.0 58 4 M methionine 4.0 18 1 N asparagine 2.2 10 1 P proline 6.3 28 2 Q glutamine 2.7 12 2 R arginine 2.9 13 1 S serine 6.5 29 2 T threonine 6.0 27 2 V valine 8.5 38 3 W tryptophan 1.8 8 1 Y tyrosine 4.9 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 presenilin 2 isoform 2 PSEN2 0.994 presenilin 2 isoform 1 PSEN1 0.605 presenilin 1 isoform I-467 PSEN1 0.600 presenilin 1 isoform I-463 APBB1 0.014 amyloid beta A4 precursor protein-binding, family B, ... APBB1 0.014 amyloid beta A4 precursor protein-binding, family B,... CD47 0.013 CD47 antigen isoform 3 precursor CD47 0.013 CD47 antigen isoform 2 precursor CD47 0.013 CD47 antigen isoform 1 precursor SCN3A 0.011 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.011 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.011 sodium channel, voltage-gated, type III, alpha isof... HM13 0.009 minor histocompatibility antigen 13 isoform 3 HM13 0.009 minor histocompatibility antigen 13 isoform 2 HM13 0.009 minor histocompatibility antigen 13 isoform 1 SCN9A 0.009 sodium channel, voltage-gated, type IX, alpha TERF1 0.009 telomeric repeat binding factor 1 isoform 1 TERF1 0.009 telomeric repeat binding factor 1 isoform 2 CHIC1 0.009 cysteine-rich hydrophobic domain 1 FOXM1 0.008 forkhead box M1 isoform 3 FOXM1 0.008 forkhead box M1 isoform 2 FOXM1 0.008 forkhead box M1 isoform 1 LOC100291562 0.008 PREDICTED: similar to hCG2045708 LOC100287770 0.008 PREDICTED: similar to hCG2045708 LOC100287770 0.008 PREDICTED: hypothetical protein XP_002343109 LOC100132713 0.008 PREDICTED: similar to hCG1654128 SCN1A 0.008 sodium channel, voltage-gated, type I, alpha SCN2A 0.008 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.008 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.008 sodium channel, voltage-gated, type II, alpha isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.