Guide to the Human Genome
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Name: SLC5A11 Sequence: fasta or formatted (675aa) NCBI GI: 17941285
Description:

solute carrier family 5 (sodium/glucose cotransporter), member 11

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         55           2
 C cysteine            1.8         12           1
 D aspartate           3.3         22           1
 E glutamate           3.9         26           2
 F phenylalanine       5.2         35           1
 G glycine             7.1         48           2
 H histidine           1.3          9           1
 I isoleucine          7.3         49           2
 K lysine              3.9         26           1
 L leucine            13.0         88           3
 M methionine          3.6         24           2
 N asparagine          1.9         13           1
 P proline             5.8         39           2
 Q glutamine           3.7         25           2
 R arginine            2.8         19           1
 S serine              8.4         57           5
 T threonine           4.9         33           2
 V valine              8.6         58           2
 W tryptophan          2.2         15           2
 Y tyrosine            3.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium/glucose cotransporte... 
SLC5A9                0.510   solute carrier family 5 (sodium/glucose cotransport...
SLC5A1                0.505   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A9                0.500   solute carrier family 5 (sodium/glucose cotransport...
SLC5A2                0.494   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A4                0.471   solute carrier family 5 (low affinity glucose cotran...
SLC5A10               0.467   solute carrier family 5 (sodium/glucose cotransport...
SLC5A3                0.464   solute carrier family 5 (inositol transporters), me...
SLC5A10               0.459   solute carrier family 5 (sodium/glucose cotransport...
SLC5A12               0.088   solute carrier family 5 (sodium/glucose cotransport...
SLC5A6                0.071   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A5                0.070   solute carrier family 5 (sodium iodide symporter), me...
SLC5A8                0.056   solute carrier family 5 (iodide transporter), membe...
SLC5A7                0.052   solute carrier family 5 (choline transporter), membe...
OR10H5                0.011   olfactory receptor, family 10, subfamily H, member 5...
OR10H2                0.011   olfactory receptor, family 10, subfamily H, member 2 ...
OR10H1                0.009   olfactory receptor, family 10, subfamily H, member 1 ...
OR10H4                0.008   olfactory receptor, family 10, subfamily H, member 4...
ATRIP                 0.008   ATR interacting protein isoform 2 
ATRIP                 0.008   ATR interacting protein isoform 1 
OR10H3                0.008   olfactory receptor, family 10, subfamily H, member 3 ...
OR10A3                0.007   olfactory receptor, family 10, subfamily A, member 3...
SLC28A3               0.006   concentrative Na+-nucleoside cotransporter 
OR2A7                 0.006   olfactory receptor, family 2, subfamily A, member 7 ...
OR2A1                 0.005   olfactory receptor, family 2, subfamily A, member 1 ...
OR2A4                 0.005   olfactory receptor, family 2, subfamily A, member 4 ...
OR2A42                0.005   olfactory receptor, family 2, subfamily A, member 42...
OR14I1                0.005   olfactory receptor, family 14, subfamily I, member 1...
OR2A5                 0.005   olfactory receptor, family 2, subfamily A, member 5 ...
IGDCC4                0.005   immunoglobulin superfamily, DCC subclass, member 4 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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