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Search of human proteins with 30410730
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410730 fucosyltransferase 8 isoform c [Homo sapiens]
(169 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410730 fucosyltransferase 8 isoform c [Homo sapiens] 361 e-100
gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens] 328 1e-90
gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens] 328 1e-90
gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens] 328 1e-90
gi|30410722 fucosyltransferase 8 isoform b [Homo sapiens] 328 1e-90
gi|166235148 osteoclast stimulating factor 1 [Homo sapiens] 50 1e-06
gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens] 41 4e-04
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 39 0.002
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 38 0.004
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 38 0.004
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 38 0.004
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens] 37 0.008
gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo s... 36 0.014
gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo s... 36 0.014
gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo s... 36 0.014
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 36 0.014
gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo s... 36 0.014
gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo sa... 36 0.014
gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo s... 36 0.014
gi|166064036 PAK-interacting exchange factor beta isoform d [Hom... 35 0.024
gi|166064034 PAK-interacting exchange factor beta isoform c [Hom... 35 0.024
gi|22027528 PAK-interacting exchange factor beta isoform b [Homo... 35 0.024
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 35 0.031
gi|4505573 PAK-interacting exchange factor beta isoform a [Homo ... 35 0.031
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ... 35 0.031
gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo s... 35 0.031
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 35 0.031
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 34 0.068
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 34 0.068
gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo ... 33 0.089
>gi|30410730 fucosyltransferase 8 isoform c [Homo sapiens]
Length = 169
Score = 361 bits (926), Expect = e-100
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MHRQIWHLHWTLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCT 60
MHRQIWHLHWTLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCT
Sbjct: 1 MHRQIWHLHWTLVRYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCT 60
Query: 61 FSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPG 120
FSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPG
Sbjct: 61 FSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPG 120
Query: 121 DIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
DIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 121 DIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
>gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 328 bits (841), Expect = 1e-90
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 14 RYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 73
+YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM
Sbjct: 420 KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 479
Query: 74 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 133
QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY
Sbjct: 480 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 539
Query: 134 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 540 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 328 bits (841), Expect = 1e-90
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 14 RYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 73
+YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM
Sbjct: 420 KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 479
Query: 74 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 133
QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY
Sbjct: 480 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 539
Query: 134 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 540 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 328 bits (841), Expect = 1e-90
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 14 RYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 73
+YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM
Sbjct: 420 KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 479
Query: 74 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 133
QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY
Sbjct: 480 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 539
Query: 134 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 540 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410722 fucosyltransferase 8 isoform b [Homo sapiens]
Length = 446
Score = 328 bits (841), Expect = 1e-90
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 14 RYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 73
+YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM
Sbjct: 291 KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 350
Query: 74 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 133
QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY
Sbjct: 351 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 410
Query: 134 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 411 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 446
>gi|166235148 osteoclast stimulating factor 1 [Homo sapiens]
Length = 214
Score = 49.7 bits (117), Expect = 1e-06
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAG----NHWDGYSKGVNRKLGRTGLYPSYKVREKIET 158
A+Y +PRT DE+ E GDII + N W G SK GRTGL PS V E+ E+
Sbjct: 19 ALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSK------GRTGLIPSNYVAEQAES 72
Query: 159 VKYPTYPEAEK 169
+ P + A++
Sbjct: 73 IDNPLHEAAKR 83
>gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens]
Length = 729
Score = 41.2 bits (95), Expect = 4e-04
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 73 MQTLHPDASANFHSLDDIYYFGGQ---NAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH 129
+ T HP + HS + G Q +A+ +A++++ DE+ ++ G+ + V G
Sbjct: 354 VSTYHPAPVSPGHSTAVVSLPGSQQHLSANMFVALHSYSAHGPDELDLQKGEGVRVLGKC 413
Query: 130 WDGYSKGVNRKLGRTGLYPS 149
DG+ +GV+ GR G++P+
Sbjct: 414 QDGWLRGVSLVTGRVGIFPN 433
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 102 IAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
+A+YA++P+ +DE+ + G++ V DG+ KG + + G +G++P
Sbjct: 470 LALYAYKPQKSDELELHKGEMYRVLEKCQDGWFKGASLRTGVSGVFP 516
Score = 38.9 bits (89), Expect = 0.002
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 104 IYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
+ ++ P++ EI ++ GDI+ V DG+ KG ++ GRTGL+P
Sbjct: 831 VVSYPPQSEAEIELKEGDIVFVHKKREDGWYKGTLQRNGRTGLFP 875
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 38.1 bits (87), Expect = 0.004
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 102 IAIYAHQPRTADEIPMEPGDIIGV----AGNHWDGYSKGVNRKLGRTGLYPSYKVREKIE 157
IA+ AH P+ EIP+ G+ + V G W+G K GRTG +P+ V E+++
Sbjct: 493 IAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVK------GRTGWFPADCV-EEVQ 545
Query: 158 TVKYPTYPEAEK 169
++ T PE +
Sbjct: 546 MRQHDTRPETRE 557
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 38.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 105 YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVRE 154
+++ P+ DE+ ++ GDII V G +G+ +GV G+TG++PS ++E
Sbjct: 70 FSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLN--GKTGMFPSNFIKE 117
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 38.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 105 YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVRE 154
+++ P+ DE+ ++ GDII V G +G+ +GV G+TG++PS ++E
Sbjct: 107 FSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLN--GKTGMFPSNFIKE 154
>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
Length = 888
Score = 37.0 bits (84), Expect = 0.008
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 104 IYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
+ ++ P++ E+ ++ GDI+ V DG+ KG ++ G+TGL+P
Sbjct: 837 VVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFP 881
Score = 35.4 bits (80), Expect = 0.024
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 102 IAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
+AIY + PR DE+ + G++ V DG+ KG + + G++P
Sbjct: 451 VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFP 497
>gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo
sapiens]
Length = 740
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 679 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 736
>gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo
sapiens]
Length = 781
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 720 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 777
>gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo
sapiens]
Length = 905
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 844 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 901
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 1090 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 1147
>gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo
sapiens]
Length = 1292
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 1231 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 1288
>gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 755 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 812
>gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo
sapiens]
Length = 684
Score = 36.2 bits (82), Expect = 0.014
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 96 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 623 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 680
>gi|166064036 PAK-interacting exchange factor beta isoform d [Homo
sapiens]
Length = 753
Score = 35.4 bits (80), Expect = 0.024
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 74 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 126
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 110 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 164
Query: 127 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 167
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 165 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 202
>gi|166064034 PAK-interacting exchange factor beta isoform c [Homo
sapiens]
Length = 803
Score = 35.4 bits (80), Expect = 0.024
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 74 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 126
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 160 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 214
Query: 127 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 167
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 215 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 252
>gi|22027528 PAK-interacting exchange factor beta isoform b [Homo
sapiens]
Length = 782
Score = 35.4 bits (80), Expect = 0.024
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 74 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 126
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 139 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 193
Query: 127 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 167
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 194 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 231
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 35.0 bits (79), Expect = 0.031
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 97 NAHNQIAIYAH---QPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
N++NQ+ + A Q DE+ GD+I V G+ +G GRTG +PS VR
Sbjct: 4 NSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLN--GRTGWFPSNYVR 61
Query: 154 EKIETVKYPTYPEA 167
E ++ + P P++
Sbjct: 62 E-VKASEKPVSPKS 74
>gi|4505573 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 35.0 bits (79), Expect = 0.031
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 97 NAHNQIAIYAH---QPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
N++NQ+ + A Q DE+ GD+I V G+ +G GRTG +PS VR
Sbjct: 4 NSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLN--GRTGWFPSNYVR 61
Query: 154 EKIETVKYPTYPEA 167
E ++ + P P++
Sbjct: 62 E-VKASEKPVSPKS 74
>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
sapiens]
Length = 671
Score = 35.0 bits (79), Expect = 0.031
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
A+Y ++P+ DE+ + GD + V DG+ GV+R+ + G +P
Sbjct: 619 AMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFP 664
>gi|65301112 sorbin and SH3 domain containing 3 isoform 2 [Homo
sapiens]
Length = 329
Score = 35.0 bits (79), Expect = 0.031
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 148
A+Y ++P+ DE+ + GD + V DG+ GV+R+ + G +P
Sbjct: 277 AMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFP 322
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 35.0 bits (79), Expect = 0.031
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 106 AHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKV 152
A++PR DE+ +E D++ V DG+ +GV G G +P +V
Sbjct: 1520 AYKPRENDELALEKADVVMVTQQSSDGWLEGVRLSDGERGWFPVQQV 1566
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 33.9 bits (76), Expect = 0.068
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKL-----GRTGLYPSYKVREKIE 157
A+Y + R+ DEI ++PGDI+ V G D G L G+TG +P+ EKI
Sbjct: 747 ALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPA-NYAEKIP 805
Query: 158 TVKYP 162
+ P
Sbjct: 806 ENEVP 810
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 33.9 bits (76), Expect = 0.068
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKL-----GRTGLYPSYKVREKIE 157
A+Y + R+ DEI ++PGDI+ V G D G L G+TG +P+ EKI
Sbjct: 747 ALYPFESRSHDEITIQPGDIVMVKGEWVDESQTGEPGWLGGELKGKTGWFPA-NYAEKIP 805
Query: 158 TVKYP 162
+ P
Sbjct: 806 ENEVP 810
>gi|224586855 sorbin and SH3 domain containing 2 isoform 8 [Homo
sapiens]
Length = 492
Score = 33.5 bits (75), Expect = 0.089
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 103 AIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 153
A+Y + PR DE+ + D+I V DG+ G +R+ G +P V+
Sbjct: 440 ALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVK 490
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,659,387
Number of Sequences: 37866
Number of extensions: 264044
Number of successful extensions: 625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 569
Number of HSP's gapped (non-prelim): 96
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.