Guide to the Human Genome
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Name: ZNF490 Sequence: fasta or formatted (529aa) NCBI GI: 29789112
Description:

zinc finger protein 490

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         17           1
 C cysteine            6.8         36           1
 D aspartate           2.1         11           1
 E glutamate           9.6         51           2
 F phenylalanine       4.9         26           2
 G glycine             6.4         34           2
 H histidine           6.8         36           2
 I isoleucine          2.6         14           1
 K lysine              9.5         50           2
 L leucine             5.1         27           2
 M methionine          1.3          7           1
 N asparagine          3.0         16           1
 P proline             4.2         22           1
 Q glutamine           4.7         25           1
 R arginine            7.2         38           2
 S serine              7.9         42           4
 T threonine           7.2         38           1
 V valine              3.4         18           1
 W tryptophan          0.6          3           1
 Y tyrosine            3.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 490 
ZNF14                 0.578   zinc finger protein 14 
ZNF709                0.564   zinc finger protein 709 isoform a 
ZNF564                0.526   zinc finger protein 564 
ZNF709                0.523   zinc finger protein 709 isoform b 
ZNF791                0.512   zinc finger protein 791 
LOC729747             0.505   similar to zinc finger protein 709 
LOC100290363          0.504   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.504   PREDICTED: hypothetical protein XP_002343682 
LOC100292533          0.503   PREDICTED: similar to zinc finger protein 564 [Homo...
ZNF136                0.500   zinc finger protein 136 
ZNF20                 0.490   zinc finger protein 20 
ZNF433                0.478   zinc finger protein 433 
ZNF627                0.471   zinc finger protein 627 
ZNF700                0.462   zinc finger protein 700 
ZNF443                0.460   zinc finger protein 443 
ZNF799                0.460   zinc finger protein 799 
ZNF823                0.458   ZFP-36 for a zinc finger protein 
ZNF442                0.457   zinc finger protein 442 
ZNF439                0.455   zinc finger protein 439 
ZNF44                 0.450   zinc finger protein 44 
ZNF563                0.445   zinc finger protein 563 
ZNF555                0.444   zinc finger protein 555 
ZNF440                0.439   zinc finger protein 440 
ZNF441                0.426   zinc finger protein 441 
ZNF77                 0.425   zinc finger protein 77 
ZNF57                 0.416   zinc finger protein 57 
ZNF699                0.412   zinc finger protein 699 
ZNF135                0.409   zinc finger protein 135 
ZNF420                0.409   zinc finger protein 420 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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