Guide to the Human Genome
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Name: ZNF443 Sequence: fasta or formatted (671aa) NCBI GI: 194018515
Description:

zinc finger protein 443

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         28           1
 C cysteine            6.9         46           1
 D aspartate           2.2         15           1
 E glutamate           7.9         53           2
 F phenylalanine       4.6         31           2
 G glycine             7.3         49           1
 H histidine           8.0         54           2
 I isoleucine          1.9         13           1
 K lysine             11.3         76           2
 L leucine             4.9         33           2
 M methionine          1.8         12           1
 N asparagine          2.1         14           1
 P proline             4.3         29           1
 Q glutamine           3.9         26           2
 R arginine            6.3         42           2
 S serine              8.2         55           3
 T threonine           6.4         43           2
 V valine              2.5         17           2
 W tryptophan          0.7          5           1
 Y tyrosine            4.5         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 443 
ZNF799                0.803   zinc finger protein 799 
ZNF442                0.668   zinc finger protein 442 
ZNF823                0.632   ZFP-36 for a zinc finger protein 
ZNF44                 0.610   zinc finger protein 44 
ZNF709                0.540   zinc finger protein 709 isoform a 
ZNF433                0.533   zinc finger protein 433 
ZNF14                 0.517   zinc finger protein 14 
ZNF700                0.510   zinc finger protein 700 
ZNF709                0.506   zinc finger protein 709 isoform b 
ZNF563                0.466   zinc finger protein 563 
ZNF441                0.463   zinc finger protein 441 
ZNF420                0.435   zinc finger protein 420 
ZNF20                 0.430   zinc finger protein 20 
ZNF791                0.428   zinc finger protein 791 
ZNF136                0.425   zinc finger protein 136 
ZNF564                0.422   zinc finger protein 564 
ZNF208                0.417   zinc finger protein 208 
ZNF91                 0.414   zinc finger protein 91 
LOC100292052          0.408   PREDICTED: similar to hCG1773661 
LOC100287226          0.408   PREDICTED: similar to hCG1773661 
LOC100287226          0.408   PREDICTED: hypothetical protein XP_002343677 
ZNF99                 0.408   zinc finger protein 99 
ZNF726                0.402   PREDICTED: zinc finger protein 726 
ZNF726                0.402   PREDICTED: zinc finger protein 726 
ZNF726                0.402   PREDICTED: zinc finger protein 726 
ZNF43                 0.397   zinc finger protein 43 
ZNF546                0.394   zinc finger protein 546 
ZNF721                0.392   zinc finger protein 721 
LOC100287429          0.391   PREDICTED: hypothetical protein XP_002343926 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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