Guide to the Human Genome
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Name: ZNF77 Sequence: fasta or formatted (545aa) NCBI GI: 33438586
Description:

zinc finger protein 77

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         25           1
 C cysteine            8.4         46           1
 D aspartate           2.0         11           1
 E glutamate           7.2         39           2
 F phenylalanine       4.4         24           1
 G glycine             7.2         39           1
 H histidine           6.8         37           2
 I isoleucine          1.5          8           1
 K lysine              8.3         45           2
 L leucine             4.0         22           2
 M methionine          1.1          6           1
 N asparagine          2.2         12           1
 P proline             4.0         22           2
 Q glutamine           4.4         24           1
 R arginine            6.8         37           2
 S serine             10.5         57           3
 T threonine           6.6         36           1
 V valine              4.8         26           1
 W tryptophan          0.6          3           1
 Y tyrosine            4.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 77 
ZNF555                0.487   zinc finger protein 555 
ZNF699                0.484   zinc finger protein 699 
ZNF709                0.476   zinc finger protein 709 isoform a 
ZNF14                 0.467   zinc finger protein 14 
ZNF57                 0.446   zinc finger protein 57 
ZNF709                0.444   zinc finger protein 709 isoform b 
ZNF791                0.443   zinc finger protein 791 
LOC729747             0.428   similar to zinc finger protein 709 
ZNF564                0.421   zinc finger protein 564 
ZNF433                0.416   zinc finger protein 433 
ZNF20                 0.414   zinc finger protein 20 
ZNF823                0.413   ZFP-36 for a zinc finger protein 
ZNF136                0.410   zinc finger protein 136 
ZNF490                0.408   zinc finger protein 490 
ZNF420                0.402   zinc finger protein 420 
ZNF627                0.401   zinc finger protein 627 
ZNF799                0.400   zinc finger protein 799 
ZNF778                0.398   zinc finger protein 778 
LOC100292533          0.397   PREDICTED: similar to zinc finger protein 564 [Homo...
ZNF443                0.397   zinc finger protein 443 
ZNF30                 0.397   zinc finger protein 30 isoform a 
ZNF30                 0.397   zinc finger protein 30 isoform a 
ZNF30                 0.396   zinc finger protein 30 isoform b 
LOC100290363          0.395   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.395   PREDICTED: hypothetical protein XP_002343682 
ZNF442                0.395   zinc finger protein 442 
ZNF700                0.391   zinc finger protein 700 
ZNF540                0.389   zinc finger protein 540 
ZNF665                0.387   zinc finger protein 665 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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