Guide to the Human Genome
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Name: ZNF44 Sequence: fasta or formatted (615aa) NCBI GI: 134947986
Description:

zinc finger protein 44

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         22           1
 C cysteine            7.0         43           1
 D aspartate           2.9         18           2
 E glutamate           8.6         53           3
 F phenylalanine       5.4         33           2
 G glycine             7.5         46           2
 H histidine           7.3         45           1
 I isoleucine          2.3         14           1
 K lysine              9.9         61           2
 L leucine             4.2         26           2
 M methionine          1.6         10           2
 N asparagine          2.4         15           1
 P proline             4.2         26           1
 Q glutamine           3.3         20           1
 R arginine            7.2         44           2
 S serine              8.8         54           3
 T threonine           6.0         37           2
 V valine              2.9         18           2
 W tryptophan          0.8          5           1
 Y tyrosine            4.1         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 44 
ZNF442                0.743   zinc finger protein 442 
ZNF823                0.738   ZFP-36 for a zinc finger protein 
ZNF799                0.732   zinc finger protein 799 
ZNF443                0.728   zinc finger protein 443 
ZNF709                0.570   zinc finger protein 709 isoform a 
ZNF441                0.566   zinc finger protein 441 
ZNF563                0.535   zinc finger protein 563 
ZNF700                0.535   zinc finger protein 700 
ZNF14                 0.532   zinc finger protein 14 
ZNF433                0.527   zinc finger protein 433 
ZNF709                0.526   zinc finger protein 709 isoform b 
ZNF136                0.470   zinc finger protein 136 
ZNF791                0.464   zinc finger protein 791 
ZNF564                0.434   zinc finger protein 564 
ZNF20                 0.433   zinc finger protein 20 
ZNF627                0.433   zinc finger protein 627 
ZNF555                0.426   zinc finger protein 555 
ZNF420                0.423   zinc finger protein 420 
ZNF91                 0.419   zinc finger protein 91 
ZNF30                 0.406   zinc finger protein 30 isoform b 
ZNF30                 0.406   zinc finger protein 30 isoform a 
ZNF30                 0.406   zinc finger protein 30 isoform a 
ZNF699                0.406   zinc finger protein 699 
LOC729747             0.406   similar to zinc finger protein 709 
ZNF569                0.405   zinc finger protein 569 
ZNF595                0.403   zinc finger protein 595 
ZNF208                0.402   zinc finger protein 208 
ZNF99                 0.401   zinc finger protein 99 
ZNF234                0.399   zinc finger protein 234 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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