Guide to the Human Genome
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Name: ZNF627 Sequence: fasta or formatted (461aa) NCBI GI: 21699088
Description:

zinc finger protein 627

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         17           1
 C cysteine            6.3         29           1
 D aspartate           2.8         13           1
 E glutamate           8.9         41           2
 F phenylalanine       4.8         22           1
 G glycine             7.8         36           2
 H histidine           5.4         25           1
 I isoleucine          4.1         19           1
 K lysine              9.5         44           2
 L leucine             3.5         16           2
 M methionine          1.1          5           1
 N asparagine          2.8         13           1
 P proline             5.6         26           1
 Q glutamine           2.6         12           1
 R arginine            8.0         37           2
 S serine              8.5         39           3
 T threonine           5.6         26           1
 V valine              4.1         19           2
 W tryptophan          0.4          2           1
 Y tyrosine            4.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 627 
ZNF136                0.646   zinc finger protein 136 
ZNF709                0.636   zinc finger protein 709 isoform a 
ZNF564                0.615   zinc finger protein 564 
ZNF442                0.594   zinc finger protein 442 
ZNF433                0.590   zinc finger protein 433 
ZNF44                 0.590   zinc finger protein 44 
ZNF823                0.581   ZFP-36 for a zinc finger protein 
ZNF709                0.580   zinc finger protein 709 isoform b 
ZNF14                 0.579   zinc finger protein 14 
ZNF443                0.578   zinc finger protein 443 
ZNF20                 0.578   zinc finger protein 20 
ZNF799                0.570   zinc finger protein 799 
ZNF563                0.567   zinc finger protein 563 
LOC729747             0.563   similar to zinc finger protein 709 
ZNF700                0.562   zinc finger protein 700 
ZNF791                0.561   zinc finger protein 791 
ZNF439                0.558   zinc finger protein 439 
ZNF441                0.554   zinc finger protein 441 
ZNF490                0.544   zinc finger protein 490 
ZNF440                0.540   zinc finger protein 440 
LOC100290283          0.537   PREDICTED: hypothetical protein XP_002347961 
LOC100292533          0.533   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.531   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.531   PREDICTED: hypothetical protein XP_002343682 
ZNF491                0.521   zinc finger protein 491 
ZNF77                 0.481   zinc finger protein 77 
ZNF670                0.464   zinc finger protein 670 
ZNF101                0.461   zinc finger protein 101 
ZNF555                0.454   zinc finger protein 555 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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