Guide to the Human Genome
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Name: ZNF440 Sequence: fasta or formatted (595aa) NCBI GI: 157364941
Description:

zinc finger protein 440

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         18           1
 C cysteine            5.7         34           1
 D aspartate           2.7         16           2
 E glutamate           8.4         50           2
 F phenylalanine       4.9         29           1
 G glycine             6.7         40           1
 H histidine           6.4         38           1
 I isoleucine          3.2         19           1
 K lysine              9.7         58           2
 L leucine             4.5         27           2
 M methionine          2.0         12           1
 N asparagine          3.5         21           2
 P proline             5.4         32           1
 Q glutamine           3.7         22           2
 R arginine            7.9         47           2
 S serine              7.7         46           3
 T threonine           5.0         30           1
 V valine              4.9         29           2
 W tryptophan          0.3          2           1
 Y tyrosine            4.2         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 440 
ZNF700                0.654   zinc finger protein 700 
ZNF439                0.653   zinc finger protein 439 
ZNF433                0.491   zinc finger protein 433 
ZNF763                0.484   zinc finger protein 440 like 
ZNF20                 0.467   zinc finger protein 20 
ZNF491                0.432   zinc finger protein 491 
ZNF709                0.432   zinc finger protein 709 isoform a 
LOC729747             0.429   similar to zinc finger protein 709 
ZNF823                0.427   ZFP-36 for a zinc finger protein 
ZNF136                0.424   zinc finger protein 136 
ZNF791                0.423   zinc finger protein 791 
ZNF14                 0.418   zinc finger protein 14 
ZNF564                0.417   zinc finger protein 564 
ZNF627                0.417   zinc finger protein 627 
ZNF442                0.411   zinc finger protein 442 
ZNF44                 0.407   zinc finger protein 44 
ZNF563                0.403   zinc finger protein 563 
ZNF443                0.403   zinc finger protein 443 
ZNF799                0.396   zinc finger protein 799 
ZNF709                0.392   zinc finger protein 709 isoform b 
ZNF490                0.391   zinc finger protein 490 
LOC100292533          0.380   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.379   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.379   PREDICTED: hypothetical protein XP_002343682 
ZNF844                0.378   zinc finger protein 844 
ZNF555                0.355   zinc finger protein 555 
ZNF699                0.348   zinc finger protein 699 
ZNF441                0.340   zinc finger protein 441 
ZNF77                 0.327   zinc finger protein 77 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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