Guide to the Human Genome
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Name: ZNF709 Sequence: fasta or formatted (609aa) NCBI GI: 224548994
Description:

zinc finger protein 709 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [641aa] zinc finger protein 709 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         18           1
 C cysteine            8.2         50           1
 D aspartate           0.8          5           1
 E glutamate          10.0         61           2
 F phenylalanine       6.1         37           1
 G glycine             7.1         43           1
 H histidine           7.6         46           1
 I isoleucine          3.0         18           1
 K lysine             11.3         69           2
 L leucine             1.0          6           1
 M methionine          2.1         13           1
 N asparagine          1.5          9           1
 P proline             4.4         27           1
 Q glutamine           3.6         22           2
 R arginine            7.6         46           2
 S serine             10.5         64           3
 T threonine           6.4         39           2
 V valine              1.3          8           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.3         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 709 isoform b 
ZNF709                1.000   zinc finger protein 709 isoform a 
ZNF14                 0.670   zinc finger protein 14 
ZNF433                0.604   zinc finger protein 433 
ZNF700                0.571   zinc finger protein 700 
ZNF443                0.555   zinc finger protein 443 
ZNF44                 0.535   zinc finger protein 44 
ZNF823                0.532   ZFP-36 for a zinc finger protein 
ZNF441                0.531   zinc finger protein 441 
ZNF442                0.516   zinc finger protein 442 
ZNF799                0.511   zinc finger protein 799 
ZNF791                0.508   zinc finger protein 791 
ZNF420                0.505   zinc finger protein 420 
ZNF658                0.498   zinc finger protein 658 
ZNF564                0.486   zinc finger protein 564 
ZNF624                0.483   zinc finger protein 624 
ZNF91                 0.480   zinc finger protein 91 
ZNF208                0.478   zinc finger protein 208 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
ZNF726                0.477   PREDICTED: zinc finger protein 726 
LOC100292533          0.476   PREDICTED: similar to zinc finger protein 564 [Homo...
LOC100290363          0.476   PREDICTED: hypothetical protein XP_002347962 
LOC100287841          0.476   PREDICTED: hypothetical protein XP_002343682 
ZNF43                 0.475   zinc finger protein 43 
ZNF160                0.475   zinc finger protein 160 
ZNF160                0.475   zinc finger protein 160 
ZNF160                0.475   zinc finger protein 160 
ZNF184                0.473   zinc finger protein 184 
LOC100292052          0.471   PREDICTED: similar to hCG1773661 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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