Guide to the Human Genome
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Name: UNC45B Sequence: fasta or formatted (929aa) NCBI GI: 75750484
Description:

cardiomyopathy associated 4 isoform 2

Referenced in:

Muscle
Tetratricopeptide Domains

Other entries for this name:
alt prot [931aa] cardiomyopathy associated 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         88           3
 C cysteine            2.5         23           1
 D aspartate           6.9         64           3
 E glutamate           6.6         61           2
 F phenylalanine       2.3         21           1
 G glycine             5.0         46           3
 H histidine           1.8         17           1
 I isoleucine          4.8         45           2
 K lysine              8.2         76           2
 L leucine            13.7        127           3
 M methionine          2.4         22           2
 N asparagine          4.2         39           2
 P proline             2.3         21           1
 Q glutamine           5.3         49           1
 R arginine            5.7         53           2
 S serine              4.6         43           2
 T threonine           5.1         47           2
 V valine              7.1         66           2
 W tryptophan          0.3          3           1
 Y tyrosine            1.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cardiomyopathy associated 4 isoform 2 
UNC45B                0.997   cardiomyopathy associated 4 isoform 1 
UNC45A                0.566   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.566   smooth muscle cell associated protein-1 isoform 2 [H...
TTC1                  0.030   tetratricopeptide repeat domain 1 
PPP5C                 0.027   protein phosphatase 5, catalytic subunit 
SGTB                  0.027   small glutamine-rich tetratricopeptide repeat (TPR)-...
TOMM34                0.025   translocase of outer mitochondrial membrane 34 [Homo...
TOMM70A               0.024   translocase of outer mitochondrial membrane 70 homol...
ZC3H7B                0.024   zinc finger CCCH-type containing 7B 
RPAP3                 0.022   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.022   RNA polymerase II associated protein 3 isoform 1 [H...
LONRF3                0.022   LON peptidase N-terminal domain and ring finger 3 is...
SPAG1                 0.022   sperm associated antigen 1 
SPAG1                 0.022   sperm associated antigen 1 
RPAP3                 0.020   RNA polymerase II associated protein 3 isoform 3 [H...
PPID                  0.020   peptidylprolyl isomerase D 
ZC3H7A                0.020   zinc finger CCCH-type containing 7A 
SGTA                  0.019   small glutamine-rich tetratricopeptide 
STUB1                 0.018   STIP1 homology and U-box containing protein 1 
DYX1C1                0.018   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
STIP1                 0.017   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
DNAJC7                0.016   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.016   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
TTC12                 0.016   tetratricopeptide repeat domain 12 
FKBP4                 0.016   FK506 binding protein 52 
TANC1                 0.016   tetratricopeptide repeat, ankyrin repeat and coiled...
FKBP8                 0.016   FK506-binding protein 8 
DYX1C1                0.015   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
TTC3                  0.015   tetratricopeptide repeat domain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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