Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FKBP4 Sequence: fasta or formatted (459aa) NCBI GI: 4503729
Description:

FK506 binding protein 52

Referenced in:

Peptidylprolyl Isomerases
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         42           2
 C cysteine            1.1          5           1
 D aspartate           4.1         19           1
 E glutamate          12.9         59           3
 F phenylalanine       4.1         19           1
 G glycine             7.0         32           2
 H histidine           1.7          8           1
 I isoleucine          4.4         20           2
 K lysine              9.6         44           2
 L leucine             8.7         40           2
 M methionine          2.4         11           1
 N asparagine          3.5         16           2
 P proline             3.5         16           2
 Q glutamine           4.6         21           2
 R arginine            4.4         20           2
 S serine              6.1         28           2
 T threonine           3.9         18           1
 V valine              4.6         21           1
 W tryptophan          0.9          4           1
 Y tyrosine            3.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 52 
FKBP5                 0.556   FK506 binding protein 5 isoform 1 
FKBP5                 0.556   FK506 binding protein 5 isoform 1 
FKBP5                 0.556   FK506 binding protein 5 isoform 1 
FKBP5                 0.273   FK506 binding protein 5 isoform 2 
FKBP1A                0.089   FK506 binding protein 1A, 12kDa 
FKBP1A                0.089   FK506 binding protein 1A, 12kDa 
FKBP1B                0.083   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP8                 0.076   FK506-binding protein 8 
FKBP6                 0.076   FK506 binding protein 6 isoform b 
FKBP6                 0.076   FK506 binding protein 6 isoform a 
FKBPL                 0.076   WAF-1/CIP1 stabilizing protein 39 
FKBP2                 0.075   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.075   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.075   FK506 binding protein 2, 13kDa precursor 
PPID                  0.074   peptidylprolyl isomerase D 
FKBP3                 0.073   FK506 binding protein 3, 25kDa 
FKBP9                 0.067   FK506 binding protein 9 
FKBP10                0.061   FK506 binding protein 10 
RPAP3                 0.058   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.058   RNA polymerase II associated protein 3 isoform 1 [H...
TOMM34                0.057   translocase of outer mitochondrial membrane 34 [Homo...
SPAG1                 0.056   sperm associated antigen 1 
SPAG1                 0.056   sperm associated antigen 1 
RPAP3                 0.055   RNA polymerase II associated protein 3 isoform 2 [H...
FKBP7                 0.055   FK506 binding protein 7 isoform b precursor 
AIP                   0.052   aryl hydrocarbon receptor interacting protein [Homo...
TANC1                 0.051   tetratricopeptide repeat, ankyrin repeat and coiled...
FKBP7                 0.051   FK506 binding protein 7 isoform a precursor 
AIPL1                 0.047   aryl hydrocarbon receptor interacting protein-like 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press