Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FKBP8 Sequence: fasta or formatted (413aa) NCBI GI: 52630440
Description:

FK506-binding protein 8

Referenced in:

Peptidylprolyl Isomerases
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         51           2
 C cysteine            1.9          8           1
 D aspartate           4.6         19           2
 E glutamate          10.9         45          11
 F phenylalanine       1.7          7           1
 G glycine             6.3         26           2
 H histidine           1.7          7           1
 I isoleucine          2.7         11           1
 K lysine              5.6         23           2
 L leucine            12.3         51           2
 M methionine          1.9          8           1
 N asparagine          2.7         11           2
 P proline             8.2         34           2
 Q glutamine           3.9         16           2
 R arginine            4.1         17           1
 S serine              5.8         24           2
 T threonine           3.9         16           1
 V valine              6.5         27           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506-binding protein 8 
FKBP4                 0.085   FK506 binding protein 52 
PPID                  0.071   peptidylprolyl isomerase D 
FKBP5                 0.068   FK506 binding protein 5 isoform 1 
FKBP5                 0.068   FK506 binding protein 5 isoform 1 
FKBP5                 0.068   FK506 binding protein 5 isoform 1 
FKBPL                 0.056   WAF-1/CIP1 stabilizing protein 39 
FKBP6                 0.051   FK506 binding protein 6 isoform b 
SPAG1                 0.051   sperm associated antigen 1 
SPAG1                 0.051   sperm associated antigen 1 
FKBP6                 0.050   FK506 binding protein 6 isoform a 
TTC9C                 0.040   tetratricopeptide repeat domain 9C 
TTC1                  0.038   tetratricopeptide repeat domain 1 
UNC45B                0.035   cardiomyopathy associated 4 isoform 2 
UNC45B                0.035   cardiomyopathy associated 4 isoform 1 
FKBP1A                0.034   FK506 binding protein 1A, 12kDa 
FKBP1A                0.034   FK506 binding protein 1A, 12kDa 
FKBP5                 0.033   FK506 binding protein 5 isoform 2 
LRRC68                0.033   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.033   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.033   PREDICTED: leucine rich repeat containing 68 
UNC45A                0.031   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.031   smooth muscle cell associated protein-1 isoform 2 [H...
STIP1                 0.031   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
TTC9                  0.031   tetratricopeptide repeat domain 9 
PRKCSH                0.030   protein kinase C substrate 80K-H isoform 1 
SGTB                  0.030   small glutamine-rich tetratricopeptide repeat (TPR)-...
AIPL1                 0.029   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.029   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.029   aryl hydrocarbon receptor interacting protein-like 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press