Guide to the Human Genome
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Name: KIAA1949 Sequence: fasta or formatted (613aa) NCBI GI: 199559805
Description:

phostensin

Not currently referenced in the text

Other entries for this name:
alt mRNA {613aa} phostensin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         52           2
 C cysteine            0.8          5           2
 D aspartate           2.8         17           2
 E glutamate          14.2         87           3
 F phenylalanine       0.7          4           1
 G glycine             8.0         49           2
 H histidine           0.8          5           2
 I isoleucine          1.3          8           1
 K lysine              4.1         25           2
 L leucine             9.5         58           4
 M methionine          0.8          5           1
 N asparagine          1.0          6           1
 P proline            11.6         71           4
 Q glutamine           6.0         37           8
 R arginine           10.6         65           3
 S serine              8.2         50           2
 T threonine           4.2         26           2
 V valine              4.1         25           1
 W tryptophan          1.8         11           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phostensin 
KIAA1949              1.000   phostensin 
C9orf75               0.047   hypothetical protein LOC286262 isoform 2 
C9orf75               0.047   hypothetical protein LOC286262 isoform 1 
KIAA1211              0.029   hypothetical protein LOC57482 
ACIN1                 0.027   apoptotic chromatin condensation inducer 1 
RPGR                  0.027   retinitis pigmentosa GTPase regulator isoform C [Hom...
NCOR2                 0.026   nuclear receptor co-repressor 2 isoform 1 
NCOR2                 0.026   nuclear receptor co-repressor 2 isoform 2 
FIGNL2                0.026   fidgetin-like 2 
TCHH                  0.026   trichohyalin 
IVL                   0.025   involucrin 
SETD1B                0.024   SET domain containing 1B 
SYNJ1                 0.022   synaptojanin 1 isoform a 
SYNJ1                 0.022   synaptojanin 1 isoform b 
LOC283685             0.022   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SRRM1                 0.022   serine/arginine repetitive matrix 1 
LOC283767             0.021   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.021   plectin 1 isoform 11 
PLEC1                 0.021   plectin 1 isoform 10 
PLEC1                 0.021   plectin 1 isoform 8 
PLEC1                 0.021   plectin 1 isoform 7 
PLEC1                 0.021   plectin 1 isoform 6 
PLEC1                 0.021   plectin 1 isoform 3 
PLEC1                 0.021   plectin 1 isoform 2 
PLEC1                 0.021   plectin 1 isoform 1 
LOC727832             0.021   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.021   PREDICTED: hypothetical protein LOC645202 
SFPQ                  0.021   splicing factor proline/glutamine rich (polypyrimidin...
GIGYF2                0.021   GRB10 interacting GYF protein 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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