Guide to the Human Genome
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Name: RFXANK Sequence: fasta or formatted (260aa) NCBI GI: 4506499
Description:

regulatory factor X-associated ankyrin-containing protein isoform a

Referenced in:

Ankyrin Family
HLA and Related Proteins

Other entries for this name:
alt prot [237aa] regulatory factor X-associated ankyrin-containing protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         24           2
 C cysteine            0.8          2           1
 D aspartate           7.3         19           1
 E glutamate           8.5         22           2
 F phenylalanine       1.9          5           1
 G glycine             7.3         19           2
 H histidine           2.3          6           1
 I isoleucine          3.8         10           1
 K lysine              3.1          8           1
 L leucine            13.1         34           3
 M methionine          0.8          2           1
 N asparagine          3.8         10           1
 P proline             6.9         18           1
 Q glutamine           4.6         12           2
 R arginine            3.8         10           1
 S serine              6.9         18           2
 T threonine           6.5         17           2
 V valine              6.2         16           2
 W tryptophan          1.2          3           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulatory factor X-associated ankyrin-containing pro... 
RFXANK                0.871   regulatory factor X-associated ankyrin-containing pr...
ANKRA2                0.435   ankyrin repeat, family A (RFXANK-like), 2 
KIDINS220             0.121   kinase D-interacting substrate of 220 kDa 
EHMT1                 0.115   euchromatic histone-lysine N-methyltransferase 1 is...
ANK2                  0.111   ankyrin 2 isoform 3 
ANK2                  0.111   ankyrin 2 isoform 2 
ANK2                  0.111   ankyrin 2 isoform 1 
ANKHD1                0.109   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.109   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.109   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.109   ANKHD1-EIF4EBP3 protein 
ANKS3                 0.109   ankyrin repeat and sterile alpha motif domain contai...
EHMT2                 0.105   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.105   euchromatic histone-lysine N-methyltransferase 2 is...
ANKRD50               0.105   ankyrin repeat domain 50 
ANK3                  0.103   ankyrin 3 isoform 1 
ANKRD17               0.101   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.101   ankyrin repeat domain protein 17 isoform b 
ANK1                  0.099   ankyrin 1 isoform 9 
ANK1                  0.099   ankyrin 1 isoform 1 
ANK1                  0.099   ankyrin 1 isoform 3 
ANK1                  0.099   ankyrin 1 isoform 2 
ANK1                  0.099   ankyrin 1 isoform 4 
ANKK1                 0.095   ankyrin repeat and kinase domain containing 1 
TRPA1                 0.093   ankyrin-like protein 1 
PSMD10                0.093   proteasome 26S non-ATPase subunit 10 isoform 1 
CTTNBP2               0.093   cortactin binding protein 2 
ANKRD44               0.091   ankyrin repeat domain 44 
ANKRD2                0.091   ankyrin repeat domain 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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