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Search of human proteins with 122937293
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937293 tubulin tyrosine ligase-like family, member 8
[Homo sapiens]
(834 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo... 1719 0.0
gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo... 462 e-130
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ... 107 5e-23
gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo ... 107 6e-23
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 100 1e-20
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ... 99 2e-20
gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo ... 95 3e-19
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo... 92 2e-18
gi|24308516 tubulin tyrosine ligase [Homo sapiens] 86 1e-16
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo... 77 9e-14
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ... 73 1e-12
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo... 70 6e-12
gi|194239678 tubulin tyrosine ligase-like family, member 10 isof... 63 1e-09
gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H... 62 3e-09
gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo... 44 5e-04
gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho... 42 0.002
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 39 0.020
gi|195963416 tubulin tyrosine ligase-like family, member 6 isofo... 39 0.026
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 37 0.058
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 37 0.058
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 37 0.058
gi|60460889 Myb protein P42POP [Homo sapiens] 37 0.076
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.099
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.099
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.099
gi|171906567 peripheral benzodiazepine receptor-associated prote... 37 0.099
gi|171906559 peripheral benzodiazepine receptor-associated prote... 37 0.099
gi|148536862 SWI/SNF-related matrix-associated actin-dependent r... 36 0.13
gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens] 36 0.13
gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens] 36 0.13
>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
sapiens]
Length = 834
Score = 1719 bits (4453), Expect = 0.0
Identities = 834/834 (100%), Positives = 834/834 (100%)
Query: 1 MRLLDGKQTSRYSENACEKKIFSIYGHYPVVRAALRRKGWVEKKFHFLPKVIPDVEDEGA 60
MRLLDGKQTSRYSENACEKKIFSIYGHYPVVRAALRRKGWVEKKFHFLPKVIPDVEDEGA
Sbjct: 1 MRLLDGKQTSRYSENACEKKIFSIYGHYPVVRAALRRKGWVEKKFHFLPKVIPDVEDEGA 60
Query: 61 RVNDDTCAKVKENQEMALEKTDNIHDVMSRLVKNEMPYLLWTIKRDIIDYHSLTYDQMLN 120
RVNDDTCAKVKENQEMALEKTDNIHDVMSRLVKNEMPYLLWTIKRDIIDYHSLTYDQMLN
Sbjct: 61 RVNDDTCAKVKENQEMALEKTDNIHDVMSRLVKNEMPYLLWTIKRDIIDYHSLTYDQMLN 120
Query: 121 HYAKTASFTTKIGLCVNMRSLPWYVPANPDSFFPRCYSLCTESEQQEFLEDFRRTMASSI 180
HYAKTASFTTKIGLCVNMRSLPWYVPANPDSFFPRCYSLCTESEQQEFLEDFRRTMASSI
Sbjct: 121 HYAKTASFTTKIGLCVNMRSLPWYVPANPDSFFPRCYSLCTESEQQEFLEDFRRTMASSI 180
Query: 181 LKWVVSHQSCSRSSRSKPRDQREEAGSSDLSSRQDAENAEAKLRGLPGQLVDIACKVCQA 240
LKWVVSHQSCSRSSRSKPRDQREEAGSSDLSSRQDAENAEAKLRGLPGQLVDIACKVCQA
Sbjct: 181 LKWVVSHQSCSRSSRSKPRDQREEAGSSDLSSRQDAENAEAKLRGLPGQLVDIACKVCQA 240
Query: 241 YLGQLEHEDIDTSADAVEDLTEAEWEDLTQQYYSLVQVPLGSSIVLCIFKIQKVMMSFEP 300
YLGQLEHEDIDTSADAVEDLTEAEWEDLTQQYYSLVQVPLGSSIVLCIFKIQKVMMSFEP
Sbjct: 241 YLGQLEHEDIDTSADAVEDLTEAEWEDLTQQYYSLVQVPLGSSIVLCIFKIQKVMMSFEP 300
Query: 301 PTARDRQCQALLNRITSVNPQTDIDGLRNIWIIKPAAKSRGRGESPDIVCMDRVEEILEL 360
PTARDRQCQALLNRITSVNPQTDIDGLRNIWIIKPAAKSRGRGESPDIVCMDRVEEILEL
Sbjct: 301 PTARDRQCQALLNRITSVNPQTDIDGLRNIWIIKPAAKSRGRGESPDIVCMDRVEEILEL 360
Query: 361 AAADHPLSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQR 420
AAADHPLSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQR
Sbjct: 361 AAADHPLSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQR 420
Query: 421 FSLDKLDSAIHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIY 480
FSLDKLDSAIHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIY
Sbjct: 421 FSLDKLDSAIHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIY 480
Query: 481 PSMKKAIAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQ 540
PSMKKAIAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQ
Sbjct: 481 PSMKKAIAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQ 540
Query: 541 LCAQVQEDTIKVAVDRSCDIGNFELLWRQPVVEPPPFSGSDLCVAGVSVRRARRQVLPVC 600
LCAQVQEDTIKVAVDRSCDIGNFELLWRQPVVEPPPFSGSDLCVAGVSVRRARRQVLPVC
Sbjct: 541 LCAQVQEDTIKVAVDRSCDIGNFELLWRQPVVEPPPFSGSDLCVAGVSVRRARRQVLPVC 600
Query: 601 NLKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAES 660
NLKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAES
Sbjct: 601 NLKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAES 660
Query: 661 GGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGL 720
GGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGL
Sbjct: 661 GGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGL 720
Query: 721 KTAEGALRPPPGGKGEGTVCSRLPHHGHHVAACQTTGTTWDGGPGVCFLRQLLASELPMG 780
KTAEGALRPPPGGKGEGTVCSRLPHHGHHVAACQTTGTTWDGGPGVCFLRQLLASELPMG
Sbjct: 721 KTAEGALRPPPGGKGEGTVCSRLPHHGHHVAACQTTGTTWDGGPGVCFLRQLLASELPMG 780
Query: 781 PGLPRDPRAPPCLVCRGLLPPAGPCKRCRSFCAAVLQGASFVRLGGRSCSPRTP 834
PGLPRDPRAPPCLVCRGLLPPAGPCKRCRSFCAAVLQGASFVRLGGRSCSPRTP
Sbjct: 781 PGLPRDPRAPPCLVCRGLLPPAGPCKRCRSFCAAVLQGASFVRLGGRSCSPRTP 834
>gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo
sapiens]
Length = 772
Score = 462 bits (1190), Expect = e-130
Identities = 253/589 (42%), Positives = 349/589 (59%), Gaps = 67/589 (11%)
Query: 12 YSENAC-EKKIFSIYGHYPVVRAALRRKGWVEKKFHFL--PKVIPDVED--EGARVNDDT 66
Y E A +KKIF+I G YPV+R LRR+GWVEKK P ++P +D A + DT
Sbjct: 10 YVERAVKQKKIFTIQGCYPVIRCLLRRRGWVEKKMVHRSGPTLLPPQKDLDSSAMGDSDT 69
Query: 67 CAKVKENQEMALEKTDNIHDVMSRLVKNEMPYLLWTIKRDIIDYHSLTYDQMLNHYAKTA 126
E+++ + + +D +L
Sbjct: 70 TEDEDEDEDEEFQPSQ-----------------------------LFDFDDLLKFDDLDG 100
Query: 127 SFTTKIGLCVNMRSLPWYVPANPDSFFPRCYSLCTESEQQEFLEDFRRTMASSILKWVVS 186
+ +GLC+N+R+LPW+ + +SFFPRCY L E +++ F+EDF T A ++LK VV
Sbjct: 101 THALMVGLCLNLRNLPWFDEVDANSFFPRCYCLGAEDDKKAFIEDFWLTAARNVLKLVVK 160
Query: 187 HQSCSRSSRSKPRDQREEAGSSDLSSRQDAENAEAKLRGLPGQLVDIACKVCQAYLGQLE 246
+ +S P EE S D ++ +N + + VD A C+ YL L
Sbjct: 161 SEW-----KSYPIQAVEEEASGDKQPKKQEKNPVL----VSPEFVDEALCACEEYLSNLA 211
Query: 247 HEDIDTSADAVEDLTEAEWEDLTQQYYSLVQVPLGSSIVLCIFKIQKVMMSFEPPTARDR 306
H DID +A LT W Q+YY +V G+ + ++Q+
Sbjct: 212 HMDIDKDLEAPLYLTPEGWSLFLQRYYQVVHE--GAELRHLDTQVQR------------- 256
Query: 307 QCQALLNRITSVNPQTDIDGLRNIWIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHP 366
C+ +L ++ +V PQ D++G RNIWI+KP AKSRGRG I+CMD +EE+L+L +
Sbjct: 257 -CEDILQQLQAVVPQIDMEGDRNIWIVKPGAKSRGRG----IMCMDHLEEMLKLVNGNPV 311
Query: 367 LSRDNKWVVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKL 426
+ +D KWVVQKYIE PLLI TKFD+RQWFLVTDWNPLT+WFY++SY+RFSTQ FSL L
Sbjct: 312 VMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNL 371
Query: 427 DSAIHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMKKA 486
D+++HLCNN++QK+L+N R PLLP NMW+S RFQ +LQ G W ++I P MK A
Sbjct: 372 DNSVHLCNNSIQKHLENSCHRHPLLPPDNMWSSQRFQAHLQEMGAPNAWSTIIVPGMKDA 431
Query: 487 IAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQ 546
+ HA++ +QD V+ RK SFELYGADFV G DF+PWLIEIN+SPTM PST VTA+LCA VQ
Sbjct: 432 VIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQ 491
Query: 547 EDTIKVAV----DRSCDIGNFELLWRQPVVEPPPFSGSDLCVAGVSVRR 591
DT++V + DR+CD G FEL+++QP VE P + G L V G ++++
Sbjct: 492 ADTLRVVIDRMLDRNCDTGAFELIYKQPAVEVPQYVGIRLLVEGFTIKK 540
>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
sapiens]
Length = 1281
Score = 107 bits (267), Expect = 5e-23
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 24/235 (10%)
Query: 328 RNIWIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLICD 387
R WI+KP A SRGRG + L + +S + +V +YI PLLI D
Sbjct: 174 RGPWIVKPVASSRGRG--------------VYLINNPNQISLEENILVSRYINNPLLIDD 219
Query: 388 TKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF---SLDKLDSAIHLCNNAVQKYLKND 444
KFD+R + LVT ++PL I+ Y+E RF+T R+ + + + +HL N +V K +
Sbjct: 220 FKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGAKNIRNQFMHLTNYSVNKKSGDY 279
Query: 445 VG-RSPLLPAH-NMWTSTRFQEYLQRQGRG--AVWGSVIYPSMKKAIAHAMKVA---QDH 497
V P + + N W+ + YL+++GR A+ V +K I+ + +A +
Sbjct: 280 VSCDDPEVEDYGNKWSMSAMLRYLKQEGRDTTALMAHVEDLIIKTIISAELAIATACKTF 339
Query: 498 VEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKV 552
V R + FELYG D ++ +PWL+E+N SP++ P+ ++ A + D V
Sbjct: 340 VPHRSSCFELYGFDVLIDSTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTV 394
>gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo
sapiens]
Length = 423
Score = 107 bits (266), Expect = 6e-23
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 31/264 (11%)
Query: 331 WIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHP---LSRDNK--WVVQKYIETPLLI 385
WI+KP K++G+G I ++++ +I + + +S+ NK +V+ YI PLLI
Sbjct: 135 WIMKPCGKAQGKG----IFLINKLSQIKKWSRDSKTSSFVSQSNKEAYVISLYINNPLLI 190
Query: 386 CDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF--SLDKLDSA-IHLCNNAVQKYLK 442
KFD+R + LV+ + PL + YK + RF T ++ S +LD+ +HL N A+QK+
Sbjct: 191 GGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKH-- 248
Query: 443 NDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMKKAIAHAMKVAQDHVEPRK 502
G WT + + YL+ RG S ++ + I ++K + K
Sbjct: 249 ---GEDYNHIHGGKWTVSNLRLYLEST-RGKEVTSKLFDEIHWIIVQSLKAVAPVMNNDK 304
Query: 503 NSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVAVDR----SC 558
+ FE YG D ++ +PWLIE+N+SP++ ST L + DT+ +AV C
Sbjct: 305 HCFECYGYDIIIDDKLKPWLIEVNASPSLTSSTANDRILKYNLINDTLNIAVPNGEIPDC 364
Query: 559 D---------IGNFELLWRQPVVE 573
+GN+E+L+ + + +
Sbjct: 365 KWNKSPPKEVLGNYEILYDEELAQ 388
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 99.8 bits (247), Expect = 1e-20
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 32/246 (13%)
Query: 330 IWIIKPAAKSRGRGESPDIVCMDRVEEILELAAA-----DHPLSRDNKW------VVQKY 378
IWI KP A ++G+G I + EE+ L A D P+ + VVQ+Y
Sbjct: 309 IWICKPTASNQGKG----IFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRY 364
Query: 379 IETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQ 438
I+ PLL+ KFD+R + L+ P I F+ Y R + + D HL N +Q
Sbjct: 365 IQNPLLVDGRKFDVRSYLLIACTTPYMI-FFGHGYARLTLSLYDPHSSDLGGHLTNQFMQ 423
Query: 439 KYLKNDVGRSPL---LPAHNMWTSTRFQEYL-----QRQGRGAVWG-SVIYPSMKKAIAH 489
K +SPL L H +W+ Y+ + +G W + + M++ +AH
Sbjct: 424 K-------KSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKRMQQIMAH 476
Query: 490 AMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDT 549
A+ ++ + F+L G DF++ +F+ WL+E+NS+P +H + V ++ V +T
Sbjct: 477 CFLAAKPKLDCKLGYFDLIGCDFLIDDNFKVWLLEMNSNPALHTNCEVLKEVIPGVVIET 536
Query: 550 IKVAVD 555
+ + ++
Sbjct: 537 LDLVLE 542
Score = 32.7 bits (73), Expect = 1.4
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 24/161 (14%)
Query: 590 RRARRQVLPVCNLKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLA 649
+R R Q P + + P A P P P P PA +R +G +E+GL
Sbjct: 26 KRPRIQQRPRARVSGTIPASRLHPAPASQPGPCPAPGHCPVGPAHERPMGSSQEEGLRCQ 85
Query: 650 LLAPLRGAAESGGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLN 709
P A G +A+ P H +PA S D N
Sbjct: 86 PSQPDHDADGHCGPDLEGAERASATPGPPGLLNSH-------------RPADSDDTNA-- 130
Query: 710 AHPLEPVLRGL-----KTAEGALRPPP----GGKGEGTVCS 741
A P +L GL K + + RP P GG T+ S
Sbjct: 131 AGPSAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIIS 171
>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
sapiens]
Length = 592
Score = 98.6 bits (244), Expect = 2e-20
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 331 WIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLICDTKF 390
WI KPA SRGRG ++ D + I D+ ++VQKYI PLLI K
Sbjct: 209 WICKPAELSRGRGI---LIFSDFKDFIF-----------DDMYIVQKYISNPLLIGRYKC 254
Query: 391 DIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKL-DSAIHLCNNAVQKYLKNDVGRSP 449
D+R + VT + PLTI+ Y+E +RF+T++F L L ++ HL N+++ K +
Sbjct: 255 DLRIYVCVTGFKPLTIYVYQEGLVRFATEKFDLSNLQNNYAHLTNSSINKSGASYEKIKE 314
Query: 450 LLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMKKAIAHAMKVAQDHVEPRKNSFELYG 509
++ WT +RF YL+ V +++ + + + + V N FEL+G
Sbjct: 315 VIGHGCKWTLSRFFSYLRSWD---VDDLLLWKKIHRMVILTILAIAPSVPFAANCFELFG 371
Query: 510 ADFVLGRDFRPWLIEINSSPTM 531
D ++ + +PWL+E+N SP +
Sbjct: 372 FDILIDDNLKPWLLEVNYSPAL 393
>gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo
sapiens]
Length = 439
Score = 94.7 bits (234), Expect = 3e-19
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 40/251 (15%)
Query: 331 WIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNK-------WVVQKYIETPL 383
WI+KP A+S+G+G I R+++I++ D S D K +V Q+YIE P
Sbjct: 164 WIMKPVARSQGKG----IFLFRRLKDIVDWRK-DTRSSDDQKDDIPVENYVAQRYIENPY 218
Query: 384 LICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQKYLKN 443
LI KFD+R + LV + E L +R +HL N AVQK +
Sbjct: 219 LIGGRKFDLRVYVLVMS-------VFAECLLWSGHRR-------QDVHLTNVAVQKTSPD 264
Query: 444 DVGRSPLLPAHNMWTSTRFQEYL-QRQGRGAVWGSVIYPSMKKAIAHAMKVAQDHVEPRK 502
+ WT RF++YL + G AV ++ + +++ Q + K
Sbjct: 265 YHPKKGC-----KWTLQRFRQYLASKHGPEAV--ETLFRDIDNIFVKSLQSVQKVIISDK 317
Query: 503 NSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVA------VDR 556
+ FELYG D ++ +D +PWL+E+N+SP++ S+ +L + EDT+ V R
Sbjct: 318 HCFELYGYDILIDQDLKPWLLEVNASPSLTASSQEDYELKTCLLEDTLHVVDMEARLTGR 377
Query: 557 SCDIGNFELLW 567
+G F+L+W
Sbjct: 378 EKRVGGFDLMW 388
>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
sapiens]
Length = 1199
Score = 92.4 bits (228), Expect = 2e-18
Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 23/235 (9%)
Query: 328 RNIWIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLICD 387
R WI+KP A +RG G +++ L + +VQ+Y+ P LI
Sbjct: 715 RQKWIVKPPASARGIG--------------IQVIHKWSQLPKRRPLLVQRYLHKPYLISG 760
Query: 388 TKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKL---DSAIHLCNNAV-QKYLKN 443
+KFD+R + VT ++PL I+ + + +RF++ ++S + +HL N +V +K +
Sbjct: 761 SKFDLRIYVYVTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAEY 820
Query: 444 DVGRSPLLPAHNMWTSTRFQEYLQRQG--RGAVWGSVIYPSMKKAIA---HAMKVAQDHV 498
+ + W YL ++G A+W + +K I+ + + + +V
Sbjct: 821 QANADEMACQGHKWALKALWNYLSQKGVNSDAIWEKIKDVVVKTIISSEPYVTSLLKMYV 880
Query: 499 EPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVA 553
+ EL+G D +L + +PW++E+N SP++H S+P+ + Q+ D + +A
Sbjct: 881 RRPYSCHELFGFDIMLDENLKPWVLEVNISPSLHSSSPLDISIKGQMIRDLLNLA 935
>gi|24308516 tubulin tyrosine ligase [Homo sapiens]
Length = 377
Score = 86.3 bits (212), Expect = 1e-16
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 325 DGLRNIWIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLL 384
DG N+WI K +A ++G G I+ E+L+ ++ V+QKY+E PLL
Sbjct: 141 DGEGNVWIAKSSAGAKGEG----ILISSEASELLDFID-----NQGQVHVIQKYLEHPLL 191
Query: 385 I--CDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKL-DSAIHLCNNAVQKYL 441
+ KFDIR W LV + I+ Y+E LR +++ + +D D HL N+ +QK
Sbjct: 192 LEPGHRKFDIRSWVLVD--HQYNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEY 249
Query: 442 KNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMKKAIAHAMKVAQDHVEPR 501
+ G+ N F +YL + S++ +K I + + + + +
Sbjct: 250 SKNYGK---YEEGNEMFFKEFNQYLTSALNITLESSILL-QIKHIIRNCLLSVEPAISTK 305
Query: 502 K---NSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTI 550
SF+L+G DF++ + + WLIE+N +P + + A+LC + + I
Sbjct: 306 HLPYQSFQLFGFDFMVDEELKVWLIEVNGAPAC--AQKLYAELCQGIVDIAI 355
>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
sapiens]
Length = 459
Score = 76.6 bits (187), Expect = 9e-14
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 25/204 (12%)
Query: 374 VVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF---SLDKLDS-A 429
+ Q+YI PLLI KFD+R + L+T +PL I+ Y+E RF+T + S + LD+
Sbjct: 228 ICQQYISKPLLIDGFKFDMRVYVLITSCDPLRIFTYEEGLARFATTPYMEPSHNNLDNVC 287
Query: 430 IHLCNNAVQKYLKN-----DVGRSPLLPAHNMWTSTRFQEYLQRQGRGAVWGSVIYPSMK 484
+HL N A+ K+ +N VG L N+W QE+ G +WG I +
Sbjct: 288 MHLTNYAINKHNENFVRDGAVGSKRKLSTLNIW----LQEHSYNPGE--LWGD-IEDIII 340
Query: 485 KAIAHAMKVAQDHVE---PRKNS------FELYGADFVLGRDFRPWLIEINSSPTMHPST 535
K I A V + + P+ + FE+ G D +L +PWL+E+N SP+ +
Sbjct: 341 KTIISAHSVLRHNYRTCFPQYLNGGTCACFEILGFDILLDHKLKPWLLEVNHSPSFTTDS 400
Query: 536 PVTAQLCAQVQEDTIKVAVDRSCD 559
+ ++ + D + + R CD
Sbjct: 401 CLDQEVKDALLCDAMTLVNLRGCD 424
>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
sapiens]
Length = 887
Score = 72.8 bits (177), Expect = 1e-12
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 35/246 (14%)
Query: 331 WIIKPAAKSRGRGESPDIVCMDRVEEILELAAADHPLSRDNKWVVQKYIETPLLICDTKF 390
+I+KPA + G G S + +L + DH +VQ+YIE P L+ KF
Sbjct: 157 FIVKPANGAMGHGIS-------LIRNGDKLPSQDH-------LIVQEYIEKPFLMEGYKF 202
Query: 391 DIRQWFLVTDWNPLTIWFYKESYLRFSTQRF----SLDKLDSAIHLCNNAVQK---YLKN 443
D+R + LVT +PL I+ Y + +R T+++ + +HL N +V K + +
Sbjct: 203 DLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPPNESNLTQLYMHLTNYSVNKHNEHFER 262
Query: 444 DVGRSPLLPAHNMWTSTRFQEYLQRQGRGAV--WGSVIYPSMKKAIA------HAMKVAQ 495
D + W F E+LQ W + +K I HA ++ +
Sbjct: 263 DETENKGSKRSIKW----FTEFLQANQHDVAKFWSDISELVVKTLIVAEPHVLHAYRMCR 318
Query: 496 DHVEPRKNS--FELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVA 553
P S FE+ G D +L R +PWL+EIN +P+ + + V + +K+
Sbjct: 319 PGQPPGSESVCFEVLGFDILLDRKLKPWLLEINRAPSFGTDQKIDYDVKRGVLLNALKLL 378
Query: 554 VDRSCD 559
R+ D
Sbjct: 379 NIRTSD 384
>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
1 [Homo sapiens]
Length = 891
Score = 70.5 bits (171), Expect = 6e-12
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 374 VVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFS---LDKLDS-A 429
+ Q YI P +I KFD+R + LVT +PL I+ Y E RF+T +S D LD
Sbjct: 249 ICQLYISKPFIIDGFKFDLRIYVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDIC 308
Query: 430 IHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQRQGRGA--VW---GSVIYPSMK 484
+HL N ++ K+ N + + T F YL+ +W VI ++
Sbjct: 309 MHLTNYSINKHSSNFSRDAHSGSKRKLST---FSAYLEDHSYNVEQIWRDIEDVIIKTLI 365
Query: 485 KA---IAHAMKVAQDHVEPRKNSFELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQL 541
A I H + FE+ G D +L +PWL+E+N SP+ + + ++
Sbjct: 366 SAHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDSRLDKEV 425
Query: 542 CAQVQEDTIKVAVDRSCD 559
+ DT+ + SCD
Sbjct: 426 KDGLLYDTLVLINLESCD 443
>gi|194239678 tubulin tyrosine ligase-like family, member 10 isoform
2 [Homo sapiens]
Length = 404
Score = 63.2 bits (152), Expect = 1e-09
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 330 IWIIKPAAKSRGRGESPDIVCMDRVEEILELAAA-----DHPLSRDNKW------VVQKY 378
IWI KP A ++G+G I + EE+ L A D P+ + VVQ+Y
Sbjct: 236 IWICKPTASNQGKG----IFLLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRY 291
Query: 379 IETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLDSAIHLCNNAVQ 438
I+ PLL+ KFD+R + L+ P I F+ Y R + + D HL N +Q
Sbjct: 292 IQNPLLVDGRKFDVRSYLLIACTTPYMI-FFGHGYARLTLSLYDPHSSDLGGHLTNQFMQ 350
Query: 439 KYLKNDVGRSP---LLPAHNMWTSTRFQEYL 466
K +SP LL H +W+ Y+
Sbjct: 351 K-------KSPLYMLLKEHTVWSMEHLNRYI 374
>gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo
sapiens]
Length = 800
Score = 61.6 bits (148), Expect = 3e-09
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 374 VVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF------SLDKLD 427
VVQ+YI PLLI KFDIR + L+ +PL I+ K+ RF T+ + +L ++
Sbjct: 370 VVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRI- 428
Query: 428 SAIHLCNNAVQKYLKNDVGRSPLLPAHNMWTSTRFQEYLQR-QGRGA----VWGSVIYPS 482
+HL N ++ + N + + + + F L R +G VW +I
Sbjct: 429 -FMHLTNYSLNIHSGNFIHSD----SASTGSKRTFSSILCRLSSKGVDIKKVWSDIISVV 483
Query: 483 MKKAIAHAMKVA---QDHV---EPRKNSFELYGADFVLGRDFRPWLIEINSSPTM----- 531
+K IA ++ Q + P F++ G D +L ++ +P L+E+N++P+M
Sbjct: 484 IKTVIALTPELKVFYQSDIPTGRPGPTCFQILGFDILLMKNLKPILLEVNANPSMRIEHE 543
Query: 532 HPSTPVTAQLCAQVQEDTIKVAVDR 556
H +P + + ++ +KVAV R
Sbjct: 544 HELSPGVFENVPSLVDEEVKVAVIR 568
>gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo
sapiens]
Length = 644
Score = 44.3 bits (103), Expect = 5e-04
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 374 VVQKYIETPLL-----ICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRFSLDKLD 427
VV KYIE+P+L + KFDIR L+ PL ++ Y +LRFS + F+L+ LD
Sbjct: 448 VVSKYIESPVLFLREDVGKVKFDIRYIVLLRSVRPLRLFVYDVFWLRFSNRAFALNDLD 506
>gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo
sapiens]
Length = 538
Score = 42.4 bits (98), Expect = 0.002
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 374 VVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF 421
VVQ+YI PLLI KFDIR + L+ +PL I+ K+ RF T+ +
Sbjct: 370 VVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPY 417
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 38.9 bits (89), Expect = 0.020
Identities = 59/234 (25%), Positives = 74/234 (31%), Gaps = 47/234 (20%)
Query: 612 QPLKARGPSAMPDPAQGPPSPALQRDLGLKEEK--------GLPLALLAPLRGAAESGGA 663
QP A P + P P G P L + G P L P ++G
Sbjct: 960 QPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGST 1019
Query: 664 AQPTRTKAAGKVEL-----------PACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHP 712
A P + + AG + P P + Q P + +P A P S P P
Sbjct: 1020 AGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPG-SGHPGVAGNAP 1078
Query: 713 LEPVLRGLKTAEGALRPPPG------GKGEGTVCSRLPH----HGHHVAACQTTGTTWDG 762
L GL PPP G ++ LP HGHH GT
Sbjct: 1079 L-----GLPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPP 1133
Query: 763 GPGVCFLRQL---------LASELPMGPGLPRDPRAPPCLVCR---GLLPPAGP 804
V L + S LP+GPGL P +V LLP A P
Sbjct: 1134 NLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASP 1187
>gi|195963416 tubulin tyrosine ligase-like family, member 6 isoform
2 [Homo sapiens]
Length = 584
Score = 38.5 bits (88), Expect = 0.026
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 505 FELYGADFVLGRDFRPWLIEINSSPTMHPSTPVTAQLCAQVQEDTIKVAVDRSCD 559
FE+ G D +L +PWL+E+N SP+ + + ++ + DT+ + SCD
Sbjct: 82 FEILGFDILLDHKLKPWLLEVNHSPSFSTDSRLDKEVKDGLLYDTLVLINLESCD 136
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 37.4 bits (85), Expect = 0.058
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 602 LKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLR-----G 656
L + +LL A L RG +A P+PA+ PP PA E G P AP R
Sbjct: 14 LATALALLLAWLLVRRGAAASPEPARAPPEPAPP-----AEATGAP----APSRPCAPEP 64
Query: 657 AAESGGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKS 702
AA G +P G++ PA P + G P A PA++
Sbjct: 65 AASPAGPEEPGEPAGLGELGEPAGP-----GEPEGPGDPAAAPAEA 105
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 37.4 bits (85), Expect = 0.058
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 602 LKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLR-----G 656
L + +LL A L RG +A P+PA+ PP PA E G P AP R
Sbjct: 14 LATALALLLAWLLVRRGAAASPEPARAPPEPAPP-----AEATGAP----APSRPCAPEP 64
Query: 657 AAESGGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKS 702
AA G +P G++ PA P + G P A PA++
Sbjct: 65 AASPAGPEEPGEPAGLGELGEPAGP-----GEPEGPGDPAAAPAEA 105
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 37.4 bits (85), Expect = 0.058
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 19/106 (17%)
Query: 602 LKASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLR-----G 656
L + +LL A L RG +A P+PA+ PP PA E G P AP R
Sbjct: 14 LATALALLLAWLLVRRGAAASPEPARAPPEPAPP-----AEATGAP----APSRPCAPEP 64
Query: 657 AAESGGAAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKS 702
AA G +P G++ PA P + G P A PA++
Sbjct: 65 AASPAGPEEPGEPAGLGELGEPAGP-----GEPEGPGDPAAAPAEA 105
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 37.0 bits (84), Expect = 0.076
Identities = 63/236 (26%), Positives = 87/236 (36%), Gaps = 25/236 (10%)
Query: 616 ARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAESGGA---AQPTRTKAA 672
A P A P PPS QR + L E++ A S A+P+ T
Sbjct: 133 AEEPPAAPSSQPPPPSACPQRYV-LSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQE 191
Query: 673 GKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGLKTAEGALRPPPG 732
G P + +S P+ PV P + P A PL P + A PPP
Sbjct: 192 GGCPRP----KERESPPPSALQPVQLPRLALSPPP-PAPPLPPPPPLAQVAPSPPSPPPP 246
Query: 733 GKGEGTVCSRLPHHGHHVAACQTTGTTWDGG----PGVCFLRQLLASELPMGPGLPRD-- 786
+ T+ + P A +T + G+ L + L++ LP+ PG P D
Sbjct: 247 PRPPPTLSASDPSLDFLRAQQETANAIRELAGTLRQGLAKLSEALSALLPLLPGTPVDSL 306
Query: 787 -----PRAPPCLVCRGLLPPAGPCKRCR----SFCAAVLQGASFVRLGGRSCSPRT 833
P PP R +LPP P S AAV+ GA V G +PR+
Sbjct: 307 PPPLPPPPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGA-VVAARGVIIAPRS 361
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 36.6 bits (83), Expect = 0.099
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 604 ASASLLDAQPLKARGPSAM-PDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAESGG 662
A +L AQP + P+ + P P+ PP L P A P +G+
Sbjct: 175 AQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ-----LPTPGPTPSATAVPPQGS----- 224
Query: 663 AAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVL--RGL 720
PT ++A + + P P H Q P P+ P+ PL+P+ G
Sbjct: 225 ---PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 281
Query: 721 KTAEGALRPPPGGKG 735
+A +PP G+G
Sbjct: 282 PSAPSHAQPPLHGQG 296
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 36.6 bits (83), Expect = 0.099
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 604 ASASLLDAQPLKARGPSAM-PDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAESGG 662
A +L AQP + P+ + P P+ PP L P A P +G+
Sbjct: 729 AQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ-----LPTPGPTPSATAVPPQGS----- 778
Query: 663 AAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVL--RGL 720
PT ++A + + P P H Q P P+ P+ PL+P+ G
Sbjct: 779 ---PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 835
Query: 721 KTAEGALRPPPGGKG 735
+A +PP G+G
Sbjct: 836 PSAPSHAQPPLHGQG 850
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 36.6 bits (83), Expect = 0.099
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 16/135 (11%)
Query: 604 ASASLLDAQPLKARGPSAM-PDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAESGG 662
A +L AQP + P+ + P P+ PP L P A P +G+
Sbjct: 729 AQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ-----LPTPGPTPSATAVPPQGS----- 778
Query: 663 AAQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVL--RGL 720
PT ++A + + P P H Q P P+ P+ PL+P+ G
Sbjct: 779 ---PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQ 835
Query: 721 KTAEGALRPPPGGKG 735
+A +PP G+G
Sbjct: 836 PSAPSHAQPPLHGQG 850
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 36.6 bits (83), Expect = 0.099
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 615 KARGPSAMPDPAQGPPSPALQRD--LGLKEEKGLPLALLAPLRGAAESGGAAQPTRTKAA 672
+AR P A P G PS LQ LG +E G P A P+R A
Sbjct: 1037 EARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAP---------------PASPSREMAK 1081
Query: 673 GKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVL 717
G E P PC ++ A G + A + + + P P L
Sbjct: 1082 GSHEDPPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSL 1126
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 36.6 bits (83), Expect = 0.099
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 615 KARGPSAMPDPAQGPPSPALQRD--LGLKEEKGLPLALLAPLRGAAESGGAAQPTRTKAA 672
+AR P A P G PS LQ LG +E G P A P+R A
Sbjct: 1097 EARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAP---------------PASPSREMAK 1141
Query: 673 GKVELPACPCRHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVL 717
G E P PC ++ A G + A + + + P P L
Sbjct: 1142 GSHEDPPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSL 1186
>gi|148536862 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d2 isoform 2 [Homo sapiens]
Length = 510
Score = 36.2 bits (82), Expect = 0.13
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 604 ASASLLDAQPLKARGPSAMPDPAQGPPSPALQRDLGLKEEKGLPLALLAPLRGAAESGGA 663
A A+ L A P A GP +P PA P PA + G+ +P+A L A GA
Sbjct: 20 AVAAALGAPPPPA-GPGMLPGPALRGPGPAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGA 78
Query: 664 AQPTRTKAAGKVELPACPCRHVDSQAPNTGVPVAQP 699
A P R P P +D VP AQP
Sbjct: 79 AAPLR---------PGMPPTMMDPFRKRLLVPQAQP 105
>gi|7019335 hypothetical protein LOC745 isoform 1 [Homo sapiens]
Length = 1111
Score = 36.2 bits (82), Expect = 0.13
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 12/172 (6%)
Query: 573 EPPPFSGSDL-CVAGVSVRRARRQVLP--VCNLKASASLLDAQPLKARGPSAMPDPAQGP 629
+ PP SGS+ V+ R + P +C++ + L P A P P P P
Sbjct: 128 DSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPP 187
Query: 630 PSPALQRDLGLKEEKGLPLAL-----LAP--LRGAAESGGAAQPTRTKAAGKVELPACPC 682
P LQRDL +K E +P L P L +S Q + A P+
Sbjct: 188 HYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKR 247
Query: 683 RHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGLK--TAEGALRPPPG 732
+H +S + +P + A PL P +G L P PG
Sbjct: 248 KHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPG 299
>gi|188528652 hypothetical protein LOC745 isoform 2 [Homo sapiens]
Length = 1151
Score = 36.2 bits (82), Expect = 0.13
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 12/172 (6%)
Query: 573 EPPPFSGSDL-CVAGVSVRRARRQVLP--VCNLKASASLLDAQPLKARGPSAMPDPAQGP 629
+ PP SGS+ V+ R + P +C++ + L P A P P P P
Sbjct: 137 DSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPPPPAHLPGPPPPPPPPP 196
Query: 630 PSPALQRDLGLKEEKGLPLAL-----LAP--LRGAAESGGAAQPTRTKAAGKVELPACPC 682
P LQRDL +K E +P L P L +S Q + A P+
Sbjct: 197 HYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQLLQQHGAELPTHPSKKR 256
Query: 683 RHVDSQAPNTGVPVAQPAKSWDPNQLNAHPLEPVLRGLK--TAEGALRPPPG 732
+H +S + +P + A PL P +G L P PG
Sbjct: 257 KHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQGPLSPGPG 308
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,525,351
Number of Sequences: 37866
Number of extensions: 1858291
Number of successful extensions: 6936
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 6686
Number of HSP's gapped (non-prelim): 361
length of query: 834
length of database: 18,247,518
effective HSP length: 111
effective length of query: 723
effective length of database: 14,044,392
effective search space: 10154095416
effective search space used: 10154095416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.